prot_L-digitata_M_contig10026.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10026.1.1
Unique Nameprot_L-digitata_M_contig10026.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length370
Homology
BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 6.010e-104
Identity = 155/217 (71.43%), Postives = 177/217 (81.57%), Query Frame = 0
Query:   38 MKTSFCAAAGLLASGFLVAPVVQAWEDMDPLTAQQQITLFNDEDFAFSLGGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGL 254
            MKTSFC+AAGL+ +   ++   QA      +TAQQQIT+FN EDF F+LGGP+PD  VD  Q+R   L Q+PAL+GQGI+M LVNL  C INLPHIHPRATEM YVI G+ LRVAFVEENGGEGAVVNDL QGDV FFPQGLIHY+QNLGC PV FLAALN++DPG VTITTRFFELPSEAIQASLNF+DP L+ LIE LP+APA A+RQCL+ CGL
Sbjct:    1 MKTSFCSAAGLVVAAGFMSSTAQA---SGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGL 214          
BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 3.550e-102
Identity = 155/217 (71.43%), Postives = 178/217 (82.03%), Query Frame = 0
Query:   38 MKTSFCAAAGLLASGFLVAPVVQAWEDMDPLTAQQQITLFNDEDFAFSLGGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGL 254
            MKTSFCAAAG +    + A ++ A +    +T QQQITL+N EDF FSLGGP+PD LVD  QLR   +NQLPAL+GQGISM LVNL PCAINLPHIHPRATEM+YVI G+ LRVAFVEENGGEGAVVNDL QGDVAFFPQGLIHYQQNL C P  FLAALN+EDPG +TITTRFFELP EAIQAS+NF++P L+ LIE LP+APA A++QCL+ C +
Sbjct:    1 MKTSFCAAAGFV----IAAGLMSAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRM 213          
BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG)

HSP 1 Score: 166 bits (421), Expect = 6.800e-46
Identity = 90/188 (47.87%), Postives = 116/188 (61.70%), Query Frame = 0
Query:   69 TAQQQITLFNDEDFAFSL-GGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFD-DPTLKALIEGLPEAPALAQRQCLKACGL 254
            T  Q++  FN EDF   L   P    +     L  +NL  +PAL  QG++M L+NL PC  NLPH+HPRA+E +YVI G++ +V F+EENG +  +VNDL QG   F PQG IHYQ NLGC     +AA N+EDPG +TI  +FF+LP  AI ASL    DP ++AL   LP  PA    +CL+ CG 
Sbjct:   37 TEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGNV-QVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGF 222          
BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC)

HSP 1 Score: 153 bits (386), Expect = 6.370e-40
Identity = 80/175 (45.71%), Postives = 107/175 (61.14%), Query Frame = 0
Query:   82 FAFSLGGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALA--QRQCLKACGL 254
            F F+    + D       + G +++Q PAL G G+S TLV+L PC+IN PH+HPRATE++Y+I G +  V F EENGG   V ND+ +GD AFFP  LIH+Q N  C P  F+A LNS+D GV TI   FF LP + +  +L  D+  +  L E LP  PAL   + +C + CGL
Sbjct:  147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKGRV-SVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319          
BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0G4EG82_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG82_VITBC)

HSP 1 Score: 148 bits (373), Expect = 7.860e-39
Identity = 81/190 (42.63%), Postives = 108/190 (56.84%), Query Frame = 0
Query:   67 PLTAQQQITLFNDEDFAFSLGGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQR--QCLKACGL 254
            PL+ +     F + DF F           +   +RG    Q PAL G G S T+ ++ PC+IN PH+HPRATEMLY+  G L+ V F EENGG   V ND+ +G+ AFFP  LIH+Q N  C P  F+  LNS+D GV TI    F LP++ +  +LN D+  +  L + LP  PAL  +  QC + CGL
Sbjct:   59 PLSRRAFREQFGNSDFTFDFNEAQVLTNGEGGGIRGATPVQWPALSGHGFSQTVTDIAPCSINTPHLHPRATEMLYITKGRLI-VGFAEENGGR-IVTNDIKEGNSAFFPHTLIHWQFNPTCEPAQFVGTLNSDDGGVHTIAQALFGLPNDVLATALNVDEYDVTLLHDELPNVPALGLKRDQCRRKCGL 246          
BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA)

HSP 1 Score: 148 bits (373), Expect = 2.360e-38
Identity = 77/185 (41.62%), Postives = 113/185 (61.08%), Query Frame = 0
Query:   77 FNDEDFAFSLGGPDPDNLVDNIQLRG----VNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGLYKD 257
            F++EDF F     +    VD++ L G    VNL + P ++  G+S +  ++GPC INLPH+HPRATE LY+I G +  + FV     +  ++NDL +  V FFP+G +HYQQN+ C    F++ L++EDPGV+ +++    LP EA+ A+ N D   +  L  GLPE PA A+ +CL  CGL  D
Sbjct:  105 FDNEDFVFDFTDSNKVT-VDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEGQVT-LGFVSTE--DRLIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFNEDQALIAQLRLGLPEGPARARSECLARCGLDMD 285          
BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A433DF28_9FUNG (RmlC-like cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG)

HSP 1 Score: 142 bits (359), Expect = 6.280e-37
Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 0
Query:   68 LTAQQQITLFNDEDFAFS-LGGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFE-LPSEAIQASLN-FDDPTLKALIEGLPEAPALAQRQCLKACGL 254
            +T  Q+++L +++DF F+ L      ++ D  +         PAL G  I+MT+  +GPC+INLPHIHPRATE+ ++  G      F EENG    +VN L++G+V  FP G IH++QNL C P  F+AA NSEDPGV TI + F   LP++ + ASL       +K L + LP+ PA+  ++C K CGL
Sbjct:   46 ITETQRLSLLDNKDFVFNFLTSKTGVSMGDGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINFIAQGKF-EAGFFEENGAR-FIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIVSASLRGLSIEQVKELTKYLPKNPAIGIQECRKRCGL 233          
BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA)

HSP 1 Score: 141 bits (356), Expect = 8.410e-37
Identity = 75/191 (39.27%), Postives = 109/191 (57.07%), Query Frame = 0
Query:   68 LTAQQQITLFNDEDFAFSLGGPDPDNLVDNIQLRG----VNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGL 254
            ++A + +  F+ EDF F     +    VD+    G     N+N  P ++   ++ T   + PC INLPH+HPR TE  Y+I G+L  V FV E+G    V+ND+      FFPQGL+HYQQN+GC P  F++ L+S DPG++ I      LP EAI A+ + D+  +  +  GLP+ PA  + +CL  CGL
Sbjct:   13 VSALRYMDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGELT-VGFVMESGR--TVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200          
BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0L0FU70_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FU70_9EUKA)

HSP 1 Score: 146 bits (368), Expect = 3.340e-36
Identity = 76/184 (41.30%), Postives = 112/184 (60.87%), Query Frame = 0
Query:   77 FNDEDFAFSLGGPDP---DNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGLYKD 257
            F++EDF F     +    D+  +   ++ V++   P ++   ++ +  ++GPC INLPH+HPR TE LYVI G +L V FV E+G    V+ND+ +    FFP+GL+HYQQN+ C P NF++ L++ DPGV+ IT     LP EA+ A+   D   +  L  GLP+ PA A+ +CLK CGL  D
Sbjct:  228 FDNEDFVFDFSDSNAVPVDSTGNGGTIQPVDIEGFPVMQLADMAYSRFSIGPCGINLPHLHPRGTESLYVIDG-MLTVGFVAESGR--LVLNDIEKDQTTFFPKGLMHYQQNMQCVPANFISILDTCDPGVLVITESLNALPDEALTATFGEDQEFINQLRLGLPDGPARARSECLKRCGLSSD 408          
BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0L0FUE8_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUE8_9EUKA)

HSP 1 Score: 142 bits (358), Expect = 4.240e-36
Identity = 67/151 (44.37%), Postives = 93/151 (61.59%), Query Frame = 0
Query:  104 NLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGL 254
            N N +P ++   ++ T   + PC INLPH+HPR TE +Y+I G  L V FV E G    ++ND+      FFPQGL+HYQQN+ C P  F++ LNS DPG++ I     ELPSEA++A+ + D   +  L  GLP  PA  + +CL+ CGL
Sbjct:  146 NRNNVPVIQASNMAQTRFRIAPCGINLPHVHPRGTESVYIIEG-ALTVGFVTEGGR--LILNDVKTDQSTFFPQGLLHYQQNMACEPAGFISILNSSDPGLLVIPAALAELPSEALEATFDEDAAFVNQLRIGLPAGPARGRAECLRRCGL 293          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDW6_ECTSI6.010e-10471.43Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JV79_9PHAE3.550e-10271.43Cupin type-1 domain-containing protein n=6 Tax=Ect... [more]
A0A507FDZ0_9FUNG6.800e-4647.87Cupin type-1 domain-containing protein n=2 Tax=Chy... [more]
A0A0G4EJ88_VITBC6.370e-4045.71Cupin type-1 domain-containing protein n=2 Tax=Vit... [more]
A0A0G4EG82_VITBC7.860e-3942.63Cupin type-1 domain-containing protein n=2 Tax=Vit... [more]
A0A0L0FR85_9EUKA2.360e-3841.62Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]
A0A433DF28_9FUNG6.280e-3742.11RmlC-like cupin n=2 Tax=Jimgerdemannia flammicoron... [more]
A0A0L0GAB9_9EUKA8.410e-3739.27Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]
A0A0L0FU70_9EUKA3.340e-3641.30Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]
A0A0L0FUE8_9EUKA4.240e-3644.37Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 198..213
score: 34.59
coord: 165..185
score: 48.39
coord: 132..152
score: 46.4
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 84..231
e-value: 3.8E-31
score: 119.5
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 85..228
e-value: 6.5E-24
score: 84.2
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 66..237
e-value: 3.2E-43
score: 149.4
NoneNo IPR availablePIRSRPIRSR617774-2PIRSR617774-2coord: 115..233
e-value: 2.2E-13
score: 47.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..370
NoneNo IPR availablePANTHERPTHR31238GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3coord: 75..227
NoneNo IPR availableCDDcd02241cupin_OxOxcoord: 40..233
e-value: 2.68153E-60
score: 190.885
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 98..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10026contigL-digitata_M_contig10026:1079..9389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10026.1.1mRNA_L-digitata_M_contig10026.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10026 1079..9390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10026.1.1 ID=prot_L-digitata_M_contig10026.1.1|Name=mRNA_L-digitata_M_contig10026.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=370bp
GHCISAARLCREHILRASGAAPPPNLLRQSDRGTTTTMKTSFCAAAGLLA
SGFLVAPVVQAWEDMDPLTAQQQITLFNDEDFAFSLGGPDPDNLVDNIQL
RGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLR
VAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSE
DPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLK
ACGLYKDDGKKDSSDDKKDSSDDKKKPDSSDDKKGESRDKKDSSDDKKMD
SSDDRKKPDSSDDKKMDSSDDRKKPDSSDDKKMDSSDDRKKPDSSDDRKK
PDSSDDRKKPDSSDDRKKPD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf