mRNA_L-digitata_M_contig10026.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-digitata_M_contig10026.1.1
Unique Name	mRNA_L-digitata_M_contig10026.1.1
Type	mRNA
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))

Homology

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BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 6.010e-104
Identity = 155/217 (71.43%), Postives = 177/217 (81.57%), Query Frame = 1

Query:  112 MKTSFCAAAGLLASGFLVAPVVQAWEDMDPLTAQQQITLFNDEDFAFSLGGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGL 762
            MKTSFC+AAGL+ +   ++   QA      +TAQQQIT+FN EDF F+LGGP+PD  VD  Q+R   L Q+PAL+GQGI+M LVNL  C INLPHIHPRATEM YVI G+ LRVAFVEENGGEGAVVNDL QGDV FFPQGLIHY+QNLGC PV FLAALN++DPG VTITTRFFELPSEAIQASLNF+DP L+ LIE LP+APA A+RQCL+ CGL
Sbjct:    1 MKTSFCSAAGLVVAAGFMSSTAQA---SGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGL 214

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BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 3.550e-102
Identity = 155/217 (71.43%), Postives = 178/217 (82.03%), Query Frame = 1

Query:  112 MKTSFCAAAGLLASGFLVAPVVQAWEDMDPLTAQQQITLFNDEDFAFSLGGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGL 762
            MKTSFCAAAG +    + A ++ A +    +T QQQITL+N EDF FSLGGP+PD LVD  QLR   +NQLPAL+GQGISM LVNL PCAINLPHIHPRATEM+YVI G+ LRVAFVEENGGEGAVVNDL QGDVAFFPQGLIHYQQNL C P  FLAALN+EDPG +TITTRFFELP EAIQAS+NF++P L+ LIE LP+APA A++QCL+ C +
Sbjct:    1 MKTSFCAAAGFV----IAAGLMSAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRM 213

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BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG)

HSP 1 Score: 166 bits (421), Expect = 6.800e-46
Identity = 90/188 (47.87%), Postives = 116/188 (61.70%), Query Frame = 1

Query:  205 TAQQQITLFNDEDFAFSL-GGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFD-DPTLKALIEGLPEAPALAQRQCLKACGL 762
            T  Q++  FN EDF   L   P    +     L  +NL  +PAL  QG++M L+NL PC  NLPH+HPRA+E +YVI G++ +V F+EENG +  +VNDL QG   F PQG IHYQ NLGC     +AA N+EDPG +TI  +FF+LP  AI ASL    DP ++AL   LP  PA    +CL+ CG 
Sbjct:   37 TEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGNV-QVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGF 222

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BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC)

HSP 1 Score: 153 bits (386), Expect = 6.370e-40
Identity = 80/175 (45.71%), Postives = 107/175 (61.14%), Query Frame = 1

Query:  244 FAFSLGGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALA--QRQCLKACGL 762
            F F+    + D       + G +++Q PAL G G+S TLV+L PC+IN PH+HPRATE++Y+I G +  V F EENGG   V ND+ +GD AFFP  LIH+Q N  C P  F+A LNS+D GV TI   FF LP + +  +L  D+  +  L E LP  PAL   + +C + CGL
Sbjct:  147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKGRV-SVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319

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BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0G4EG82_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG82_VITBC)

HSP 1 Score: 148 bits (373), Expect = 7.860e-39
Identity = 81/190 (42.63%), Postives = 108/190 (56.84%), Query Frame = 1

Query:  199 PLTAQQQITLFNDEDFAFSLGGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQR--QCLKACGL 762
            PL+ +     F + DF F           +   +RG    Q PAL G G S T+ ++ PC+IN PH+HPRATEMLY+  G L+ V F EENGG   V ND+ +G+ AFFP  LIH+Q N  C P  F+  LNS+D GV TI    F LP++ +  +LN D+  +  L + LP  PAL  +  QC + CGL
Sbjct:   59 PLSRRAFREQFGNSDFTFDFNEAQVLTNGEGGGIRGATPVQWPALSGHGFSQTVTDIAPCSINTPHLHPRATEMLYITKGRLI-VGFAEENGGR-IVTNDIKEGNSAFFPHTLIHWQFNPTCEPAQFVGTLNSDDGGVHTIAQALFGLPNDVLATALNVDEYDVTLLHDELPNVPALGLKRDQCRRKCGL 246

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BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA)

HSP 1 Score: 148 bits (373), Expect = 2.360e-38
Identity = 77/185 (41.62%), Postives = 113/185 (61.08%), Query Frame = 1

Query:  229 FNDEDFAFSLGGPDPDNLVDNIQLRG----VNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGLYKD 771
            F++EDF F     +    VD++ L G    VNL + P ++  G+S +  ++GPC INLPH+HPRATE LY+I G +  + FV     +  ++NDL +  V FFP+G +HYQQN+ C    F++ L++EDPGV+ +++    LP EA+ A+ N D   +  L  GLPE PA A+ +CL  CGL  D
Sbjct:  105 FDNEDFVFDFTDSNKVT-VDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEGQVT-LGFVSTE--DRLIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFNEDQALIAQLRLGLPEGPARARSECLARCGLDMD 285

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BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A433DF28_9FUNG (RmlC-like cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG)

HSP 1 Score: 142 bits (359), Expect = 6.280e-37
Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 1

Query:  202 LTAQQQITLFNDEDFAFS-LGGPDPDNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFE-LPSEAIQASLN-FDDPTLKALIEGLPEAPALAQRQCLKACGL 762
            +T  Q+++L +++DF F+ L      ++ D  +         PAL G  I+MT+  +GPC+INLPHIHPRATE+ ++  G      F EENG    +VN L++G+V  FP G IH++QNL C P  F+AA NSEDPGV TI + F   LP++ + ASL       +K L + LP+ PA+  ++C K CGL
Sbjct:   46 ITETQRLSLLDNKDFVFNFLTSKTGVSMGDGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINFIAQGKF-EAGFFEENGAR-FIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIVSASLRGLSIEQVKELTKYLPKNPAIGIQECRKRCGL 233

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BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA)

HSP 1 Score: 141 bits (356), Expect = 8.410e-37
Identity = 75/191 (39.27%), Postives = 109/191 (57.07%), Query Frame = 1

Query:  202 LTAQQQITLFNDEDFAFSLGGPDPDNLVDNIQLRG----VNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGL 762
            ++A + +  F+ EDF F     +    VD+    G     N+N  P ++   ++ T   + PC INLPH+HPR TE  Y+I G+L  V FV E+G    V+ND+      FFPQGL+HYQQN+GC P  F++ L+S DPG++ I      LP EAI A+ + D+  +  +  GLP+ PA  + +CL  CGL
Sbjct:   13 VSALRYMDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGELT-VGFVMESGR--TVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200

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BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0L0FU70_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FU70_9EUKA)

HSP 1 Score: 146 bits (368), Expect = 3.340e-36
Identity = 76/184 (41.30%), Postives = 112/184 (60.87%), Query Frame = 1

Query:  229 FNDEDFAFSLGGPDP---DNLVDNIQLRGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGLYKD 771
            F++EDF F     +    D+  +   ++ V++   P ++   ++ +  ++GPC INLPH+HPR TE LYVI G +L V FV E+G    V+ND+ +    FFP+GL+HYQQN+ C P NF++ L++ DPGV+ IT     LP EA+ A+   D   +  L  GLP+ PA A+ +CLK CGL  D
Sbjct:  228 FDNEDFVFDFSDSNAVPVDSTGNGGTIQPVDIEGFPVMQLADMAYSRFSIGPCGINLPHLHPRGTESLYVIDG-MLTVGFVAESGR--LVLNDIEKDQTTFFPKGLMHYQQNMQCVPANFISILDTCDPGVLVITESLNALPDEALTATFGEDQEFINQLRLGLPDGPARARSECLKRCGLSSD 408

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BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Match: A0A0L0FUE8_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUE8_9EUKA)

HSP 1 Score: 142 bits (358), Expect = 4.240e-36
Identity = 67/151 (44.37%), Postives = 93/151 (61.59%), Query Frame = 1

Query:  310 NLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLKACGL 762
            N N +P ++   ++ T   + PC INLPH+HPR TE +Y+I G  L V FV E G    ++ND+      FFPQGL+HYQQN+ C P  F++ LNS DPG++ I     ELPSEA++A+ + D   +  L  GLP  PA  + +CL+ CGL
Sbjct:  146 NRNNVPVIQASNMAQTRFRIAPCGINLPHVHPRGTESVYIIEG-ALTVGFVTEGGR--LILNDVKTDQSTFFPQGLLHYQQNMACEPAGFISILNSSDPGLLVIPAALAELPSEALEATFDEDAAFVNQLRIGLPAGPARGRAECLRRCGL 293

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot

BLAST of mRNA_L-digitata_M_contig10026.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDW6_ECTSI	6.010e-104	71.43	Cupin-like protein n=1 Tax=Ectocarpus siliculosus ...	[more]
A0A6H5JV79_9PHAE	3.550e-102	71.43	Cupin type-1 domain-containing protein n=6 Tax=Ect...	[more]
A0A507FDZ0_9FUNG	6.800e-46	47.87	Cupin type-1 domain-containing protein n=2 Tax=Chy...	[more]
A0A0G4EJ88_VITBC	6.370e-40	45.71	Cupin type-1 domain-containing protein n=2 Tax=Vit...	[more]
A0A0G4EG82_VITBC	7.860e-39	42.63	Cupin type-1 domain-containing protein n=2 Tax=Vit...	[more]
A0A0L0FR85_9EUKA	2.360e-38	41.62	Cupin type-1 domain-containing protein n=1 Tax=Sph...	[more]
A0A433DF28_9FUNG	6.280e-37	42.11	RmlC-like cupin n=2 Tax=Jimgerdemannia flammicoron...	[more]
A0A0L0GAB9_9EUKA	8.410e-37	39.27	Cupin type-1 domain-containing protein n=1 Tax=Sph...	[more]
A0A0L0FU70_9EUKA	3.340e-36	41.30	Cupin type-1 domain-containing protein n=1 Tax=Sph...	[more]
A0A0L0FUE8_9EUKA	4.240e-36	44.37	Cupin type-1 domain-containing protein n=1 Tax=Sph...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig10026	contig	L-digitata_M_contig10026:1079..9390 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	0
Seed ortholog	2880.D8LDW5
PFAMs	Cupin_1
Model size	1111
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
Exons	4
Evalue	1.43e-107
EggNOG OGs	2BYKQ@1\|root,2QQ4A@2759\|Eukaryota
Description	nutrient reservoir activity
Cds size	1110
COG category	S

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682406605.3720925-CDS-L-digitata_M_contig10026:1078..1291	1682406605.3720925-CDS-L-digitata_M_contig10026:1078..1291	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10026 1079..1291 +
1682406605.3805852-CDS-L-digitata_M_contig10026:4485..4689	1682406605.3805852-CDS-L-digitata_M_contig10026:4485..4689	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10026 4486..4689 +
1682406605.3917835-CDS-L-digitata_M_contig10026:6153..6396	1682406605.3917835-CDS-L-digitata_M_contig10026:6153..6396	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10026 6154..6396 +
1682406605.4013436-CDS-L-digitata_M_contig10026:8939..9389	1682406605.4013436-CDS-L-digitata_M_contig10026:8939..9389	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10026 8940..9389 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig10026.1.1	prot_L-digitata_M_contig10026.1.1	Laminaria digitata LdigPH10_18mv male	polypeptide	L-digitata_M_contig10026 1079..9389 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-digitata_M_contig10026:1079..9390+
coding sequence from alignment at L-digitata_M_contig10026:1079..9390+

protein sequence of mRNA_L-digitata_M_contig10026.1.1

>prot_L-digitata_M_contig10026.1.1 ID=prot_L-digitata_M_contig10026.1.1|Name=mRNA_L-digitata_M_contig10026.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=370bp
GHCISAARLCREHILRASGAAPPPNLLRQSDRGTTTTMKTSFCAAAGLLA
SGFLVAPVVQAWEDMDPLTAQQQITLFNDEDFAFSLGGPDPDNLVDNIQL
RGVNLNQLPALEGQGISMTLVNLGPCAINLPHIHPRATEMLYVIGGDLLR
VAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLGCNPVNFLAALNSE
DPGVVTITTRFFELPSEAIQASLNFDDPTLKALIEGLPEAPALAQRQCLK
ACGLYKDDGKKDSSDDKKDSSDDKKKPDSSDDKKGESRDKKDSSDDKKMD
SSDDRKKPDSSDDKKMDSSDDRKKPDSSDDKKMDSSDDRKKPDSSDDRKK
PDSSDDRKKPDSSDDRKKPD

mRNA from alignment at L-digitata_M_contig10026:1079..9390+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-digitata_M_contig10026.1.1 ID=mRNA_L-digitata_M_contig10026.1.1|Name=mRNA_L-digitata_M_contig10026.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=8312bp|location=Sequence derived from alignment at L-digitata_M_contig10026:1079..9390+ (Laminaria digitata LdigPH10_18mv male)
GGCCACTGCATCTCAGCCGCCCGTCTCTGCCGAGAGCATATACTGAGAGC
GTCGGGCGCAGCACCCCCTCCCAACCTTCTCAGGCAGAGTGATCGAGGGA
CTACCACGACGATGAAGACCTCTTTCTGCGCTGCTGCTGGGCTCCTCGCC
TCGGGCTTCCTCGTGGCTCCTGTTGTGCAGGCTTGGGAGGATATGGATCC
CCTCACGGCTCAGGTAAATTATGGTATTAATAGTGGTAGCCGCGTTCAGA
TCACTACTACTGCTGTACCGCACGGTTAGCATACACCGAACGATCATCAT
GCGACTTGACAGCAGTAGTAGTAGCGCTCGAAGCTATCGGTACGTGTGTG
TGTTCGCTCGCGTACGGCGGGCTTGCCGTAGTGGTGTAGACCTGGTAGCC
TGTTCGAGCTGTAAACGTTTGACCCTTGCGTCCTCTGGCGCTATTATTAT
TGTTCCTTTCTCCTATTGCTGTTGAAAAGGTTTGGATTTTATTACCCCAA
CGTTTTGTTAGCCAAGCAGCCAGTCACGGCACAGGTATGGATTGATGGTC
GCGCCTTTTAGACCACTACACAGCTGCACCGAACGGCCGTACGAGACGAG
CGCTCAGAGCCTCGTCTTGTGTGTTCACGTACGAGCGGCTGACCCGCCGT
AGTATAGTCTGTACGAGGCTCGCTATTTTCGTTTCCAAGTATACAGGTGG
TTTGGATGACCCTCTGACGTTTTTCGTACGAGTCAAATGGAGGCATGTGA
TAAACAGCACCAGTGGCACCAGTGCCGTTGTCGTCCACACATAACGATTT
CCTTGAGACATGGAGATACGTAGCGGTGGGGCGTTCGTGCGTGCGAGGAA
CGCTCCAACAATTTCTCGGTGTGTCCACGCACTCGCGGTATATACACGCA
CGCCGTAGGTGTGGTAGGCGGTAGCTATACTCTTGGCTGCGCACGTCGAA
GCCGACCTTCTTTTGCAGGTTTGGGTGACCTTGATACGATATGCATACCG
TTCGTATTTTTTCTCGTATAGTCAGCACCATACGATATGATACTACTACT
ATTATACTGCTGTTCGTACAGTAGTCTACTGCTGCGTGCATGTTATATTA
TCTCCTTTTGATTGAGATAGCGGTTGACCGTTCGCGCCACGCCTGTATGC
CTTGTATGCTCACTCACGTGCTGCGGGCATGCCGTAGACGTATCCCGTAT
AGGTAACCATACTCTGGCCTTGCACGTCGCTGCTGCTGTAATGTTTGGTT
TGGGTAGCCCAGGGATACTCCGTTCGTAGAGCCAGCAAGATGCCGTTTTG
TTTATTGTGGAGCGTTTGTGCGACGAATGTAGTATCTCTATAATACGCAC
GGACGGCGATATGCATGCGTTCATGTGTTACAGGCACGCCATGGATTTAT
TTTCCGACGAGCTACTCGTAGCTTGGCTTCGTCCCTACGTACATGTCATG
ATGGTTATGGTTTGGTTGGGTGACGCTGATACTTCTTTTGTAAAGTCAGC
AGCACAGCAAGCCGCGCGCGCTTTTTATGTGACTTCCTTGAGATATGTGG
CGGTGGAATGTAAAACGGCGACGACGAACGCTCAAACTCTACTATTTGTG
CTGTAACGGTATGTGGGTACTCAAGTGTCACCGGTACGTTCTATATCACT
CTTAGGCCGTACGCGTACGAGTATGTGTGTTTTGTCGCAATCCACTGCAG
ATGTGTACAGTAGGTTTGGGTGCGCCCCTGTTACTTATTTTGTGGAGTCA
GAGCATGATGCGATACCGCTCGTACACGTTGGGATTTCCTTGAGATAGCG
GTGGAATATTCCCGCGATGAACGCTCGTACGCTACTACTCGGTCGATTGT
ACCTCTGTGTGCACATATGCCGAAGACATAGTGTAATGTGTGCTCACGTG
TTACGGGTACACAATAAATACAGCCCGTTGTTGTGCTCTGTCGCTGCATG
TCGCACACCGTAGATACAGTACGTGGCTATGTTTTGTCCGTGCGTGTCGT
AATCCACTTTTTATTCGTGAACGGTCACTGTTAATACTTGGTTCGTAGAG
CCAGCAGGAGAAATTGTTGCCATGCTCCCAACAAACCCGCAACCCCGGTA
TCCACCATATATATAGCATGCCCAGTGTTAACATGTTACCAGGGTAAGCA
CTCAGCACTCCCCTTTCATCACGCCTTGCAGCCATACCCGTGACTTCGCG
ACCGTGTGGTGTCATTTGGTGTATTACATGCACCGATATACAACTCGTAC
GTATAGCGTCGTATTTATTATTGTCCCGCAGGATTGTGCCTGCAATCATA
ACGTTATGCGTATGATATACGTACGCGTACGATATTAGACTGTTTCGCGC
GCCTCTAGAATGCCATGTGGTACAGCTCGCACATTCCATAGCATCGTAGT
TGTTAAGATTCTGCATGCAATTATAGCGTCATGCGTATGTAGAGATTTTA
CTTTTTCGCACCCCTCTAATGTTATTTGGTGTTCCAGGACAATGGCATTT
GGTGTGTGTATGATATGCATCGGTACAGCTCGCACAAAAATGCTACTCGT
ATAGCATCGTATTCCGCAAGATTATGCGTCCAATCATAGTGTCGCGCGCC
CGTAGAGATTCGACTGATTCGCGCCCCTCTACTGTCATTTGGTGTATGCG
CCTCTCTAACGCCATTTGGTGTACGCACCCCTCTACTGTCATTTGGTGTA
TGTATGATATGCATCGGTAGCTCGCACAATCTTACCATAGCATCGTAGTT
GTTCCGCAAGATTATGCATGTAATCATAGAGCCGTGCGCATGTAGAAATT
CGACTTTTTTGTGCCCCTCTCTGATGCCACTTGGTGTATGCTATGCTATG
CATCGGCGTACAGCTCGAACATAACGTCGTATTTTGCATGCCATCATACA
CTGCGTCATGCGTACTCGTAGTTACTCCGCAAGATTCTACAGTATCTGCA
AACTTAGCGCCATGCGTATAATATGTGTACGTACACTACGGTACGGCGCA
CGCCGATACCGCCCCCCCCCCCTTGCACTCCCTATGTAAATACGGTACGA
GGTTCGACTGTTAACACTGTGTACGCCGATACCGCCCCCCGCCCCCCCTC
CCTTGCGCCCCCCCCTACAGCAAGTAATAACTTTGTTCAACGAGTGTGTA
CGGTACGAGGTTCGACTGTTAAAACTGTGTACGCCGATACCGTCTCCCCC
CCCCGCACTCCCTACGTAAAAGAGTGTTTGTTTTGACGATATCATATGAC
ATGAAGAAGAAACATAAAGGGGGGGGGGGGGGGATTATTTTTTTTTCGAA
TTCGGGGACACGAAATGCGGTACGTATGAGACGAAGTTCGACTGTTAACA
CTGCGCACGCCGGTACCCCCCCCCCGCCCTGCCGACCTTGCGCGCCCCCC
CTTGCAGCAACAAATCACTCTGTTCAACGACGAGGACTTCGCGTTCAGCC
TCGGCGGCCCCGACCCAGACAACCTCGTCGACAACATCCAGCTCCGTGGC
GTTAACCTCAACCAGCTCCCCGCCCTCGAGGGGCAGGGCATCTCCATGAC
CCTCGTTAACCTCGGACCCTGCGCCATCAACCTCCCCCACATCCACCCCC
GCGCCACCGAGGTGAGTCAGAATGTGCCAAATATGTTTGACAGAACGAGA
GTAGTCGGCTGAGCTGCTGCAGTTCGCTTGCTTGCTACTGCGGGGAAACT
TAGAAATCAGGAACACATTAAATTCAAAAGAAGATATATTACAGAAGAAA
AGTATGGTTTTTGACATCCAACATAGTAATCGGGACCAAAAACTGGTTAA
TGTAACACACTGGAGAAATTGTGATTTTTGGCGTCCATCGTGGGTTCTGA
TATACTACAGAATAGGCCCACGATTAAGGAAGAGCCCAGTAAGAACAAAA
GGCTCACTTTTTGGAGGACGCTAAGAAAATTTTATTAAGAAAAAGTGCTC
AGCGGCGAGGGCTACACTAAATCCTACATAGTAGTCTATGCTCAAGTTTT
TTTTAAAGGTTGTGTCACAATAAGAATCTAAAGGCTTGCTCAGATTAGGT
GTTTCTTATCGATCGGCGGGCCTATACTGTATGATGGTCCCCCGTAACAG
CTCCGCTCGTTCATTTGGCTGGTAGAACTGTAGACCGGCGTGCGCGGTAC
GGGGATGTGATGTGAGACGTATGGCTCGTTCGCTTGGCTCATAGACCTAA
AAGATAAAACTGTCGATCGGCACGACTTAACTCACCAACTATAAGCAGCA
GTCGGACTAAGAATTGTCGGCTGCCGGGGGTGCTGACTATCCGACTTACT
GGCTTTCCATTCTTGTAGGAAGGATTGTTGAATGCCGGAACATGTAGTAC
ATTTTTTTTTTTTTTTTGTCTTTTTTTGGCGGCCCGGCCGGGAAGGGCTG
ACTTGGCTCGCTTCGCTCGCCTTACTTAAGTCGGCAACACGGCTGGCCAT
CAGCTGGCTTCCCCAACTGACTTGCCGACTAATGCCAGTTAATAGTTGGC
TAACGGCACCTACTGATTAGTTGTTAGTTGTGAAATTCTGCCAACTCACA
GCACTAACCTACAGATATTCTGTACGGGTGTGAGACTTAACCGGTTTCGA
ACTGCACCCTCGTTTTACTTGGAATTATAATCGACCCATTTTTGCAGTGG
GACTCATTTTGCGACACCGAGTCTGTAGCAATGTTTCTGTACACTGCTTT
CTTCTTCTAAGTTCGACTATTATTAGTGGGCAGTGCTATATAACCAGCAA
AGGATGTGTCGTGAGTTCGAATCTCACAGGCTTCATATATTTGTTATTTT
CGAGCGAGCGTATGGAGACAGTATGAAAGCATGGTTATGATAGTGTGCTC
CTAGATACTAGAGTGTCCCGCAAATCACTGTCACAAAGTCTGAGAGATTC
GACGAACTCGAAAACATACATTTTATTAGTGGCTGATTAGGCTAGCGGGT
AGTGGTATATATCCAACGCATATCAACATGGCAACAAGAGGTATCTTGAA
GGAACGGTTTTGTTTGTCGGTCATCTGACACGCCTGCCTCCCCACCCGAC
CTTACCTGTCGCCCTTCTTGTGCAGATGCTTTACGTGATCGGGGGCGACC
TGCTGCGGGTAGCGTTCGTCGAGGAGAACGGCGGCGAGGGTGCCGTGGTC
AACGACCTCTACCAGGGGGACGTGGCCTTCTTCCCCCAGGGCCTCATCCA
CTACCAGCAGAACCTCGGCTGCAACCCGGTGAACTTCCTGGCTGCGCTTA
ACTCGGAGGACCCCGGGGTGGTGACCATCACGACTCGCTTCTTCGAGCTG
CCCAGCGAGGCCATCCAGGTGAGCTTCGTATGAAAAGTACAGCAGGTAGC
CCCTTTCAAAGGACCTCGCGATAAGGGAAACTCGTATATATGGGGCGTCA
ATTTTCTGCTACGTAACCGTTTTTGCTTTCTTTTGACTTAAAAGGGACCG
ATACCAACGAACGCTGTTGTTAAGGAACGCTGGTATATAAGCCAGCTCCA
ATCCCGAACGTACTAGGGTCCCTTAAAAGGGACTACCTACCTCTACTTAA
AGGGTCCGCTTTGGTTTGCTCAGATCATTGTGAAAGTAAAGCGTGCAACC
GGTCCAGTATCGGCCTTAACTTAACCCCTTTAGGACTGCACTCCCGTTTG
GGGGACAAGGCACTTGAAATTAGAGGCAGGTATACGTTTCTGCACAGCAG
TGCACTGGTAATGATACAGGGTTTAATCGTTTCTAGGCTCCAAACGCGGC
CTGCGTGTCAGGTGGATGTGATCAGATAGTCTAGCTGTCGCTATTCGTAG
AAAAATCGCGCAGCAGCATCTTTGTACCTGTCGTCGACGTGTGTGCGTTG
ACATTATACGGTAGTGTTGGGGAAAGTGAAGTTGCGCCGCGCGAAAAATC
AACTGTGCAATCAAGTCAATCGAGGCTTCAGCCATCTCCAAAGGGGGTCC
TTATTTTTTAGGCGCCGTCAAAAATTAGAAACGGTTCGCTGCAGCCGACC
CAGCATCAATCAGGCTTAATTGTTTATCTATATATTCACGACTATATATA
GCAAAAACGCAAAAGCAGCAGTTTCAGTTAGACCCGCCGCTGAACGAAAC
CCGGGGGTGAACGTAAGCATAACGTCTTCTGACGACCACACGCCATATCT
ACATAAGAAACCCCAACAGGTGTACCCACGATGTCCCCGGCGACCGAACC
CACGCCGAAGCTCGCACGAAAAAATGGAGGGTGTTGAGCGTTAGGTCCAA
AAATATGGGGGTTTGAGCATTCTAATATGTCACACGGTGATTGTCCTGAA
CTGCATGTTGTGCCGTAAAGAACCCGCGGTCATGACGCTTGACGACGCTG
TCCTGTCCTGTAGATCGCCCCATGGTGACACTTGCTGTTGGTTCAGAGGG
GATGATGCTCTACGCGTTTCGTTGTTCTCTCATGTCAGGCCTTTTGACCG
AAAGGGTAGAGTAGGTAGAGTCTTGTTATTTCCGCACTTTACGTTGTCCT
GTATGACAGCGGTAGCGTAGCCCGATAATGGCGCGTGTTGTTGATTTTGA
GGAGAAGGTATAGGGTATATAACCCGATGATGGCGCTTGTTTTTGATTCG
GATGAAAAAAAAACACGCGTTTTGTGTGCGATCATGCCGTCCTTCCCCCC
TACCTCGTATCGTTCGGTCTGCTCTATATCTTGCATTGACGATCCAAGCG
AAGTCGTACAACAGTAGTGCTATTATAACCCCTTTAGTACCGCACTCCCG
TTTAGGGGACAAATCACTTGGAATTAGAAGCAGAGTGTCCCCAAAACGGG
GAGTGCCGTCCTAAAGGGGTTAATACACGCAATGAATGTTTACTCACCTT
TCCACCTCTTACCTCGTATTTCGGCCTGCTCTATGCCTGCTCACTTGCGA
GCGATCCCACGGTAGGGGGTGGTGCCTTATTTTCTGAGCTTGTCACATGA
GGAGCTCAATATCTCACCCGAAACAGCAGTACTTCGAAGAAATTTGTTCG
CGCAGCCCGACCAACTTTCTATGCGCTATTACGAGGACCATAGTAAATAG
GACCAAATAAGCCTAGCAAAAATAGTTCATTGTATAGGTTTTAGTTTATA
ATCGTGGGTCCTGTTTACTATGGTCCCCCGCAATAGCCCTGAAACAAATA
TACTCGAAACATATCATACTACGCGGTAGATACTCACTTGAGGAGCGCAA
CTATAATGTCAGAAAATATTGAGCCAAAAAGTGGTTACCCCTACTGTGAA
ATTGCTCTTGCTCACTATCACGGCGGACCATAGTAAATAGGACCAAATAT
GCTTAGCAATAAAAGTGTATTATATAGGTTTTTGTGTATGTTGTGGGTCT
TATTTACTATGGCCCCCCGTAATACTGTACTACCATCGTAGTGGGACCAT
AGTAAATAGGACCCACGATATACACAAAAACCTACTTAATACCAGGTACA
ATACATTATTTTTGCTATTACTAAGCATATTTGGTCCTGTTTACTCTAAG
GTCCCCCCGTAATACCTCGTATTTCGGTTTGTCCTGTACGCCTGCATACT
TCCTCACCACTGTTACCATCGTAGTATACTCACCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCTCCCCCCCCC
CCCCCCCCCCCCGCTCTTTCCCGCCTGCGCCCNNNNNNNNNNCCCCCCCT
AATCCTCTTTTTTTCGTTTTTTCCTGTACCCCTGCATACTTCCTCCCCAC
TTTTTCAATCGTGATTTTCTCCCCCCCCCCCCCCCCCCCCGCCTCCCCTA
CCGCGTCTATCGCTTCGCTTTGTGTCCCTGCATGCTGTCATACCCTTGGG
ATTTTTCGCAGGCGTCACTGAACTTCGATGACCCCACCCTCAAGGCTCTC
ATCGAGGGGCTGCCGGAGGCTCCCGCCCTGGCTCAGCGCCAGTGCTTGAA
GGCTTGCGGCCTTTACAAAGACGACGGCAAGAAGGACAGCTCCGACGACA
AGAAGGACTCCTCAGATGACAAGAAGAAGCCGGACTCCTCGGATGACAAG
AAGGGCGAGTCCCGGGACAAGAAGGACAGCTCGGACGACAAGAAGATGGA
CAGCTCGGATGACAGGAAGAAACCCGACTCCTCCGATGACAAGAAGATGG
ACAGCTCGGACGACAGGAAGAAGCCCGACTCCTCTGATGACAAGAAGATG
GACAGCTCGGACGACAGGAAGAAGCCCGACTCCTCCGACGACAGGAAGAA
GCCCGACTCCTCCGACGACAGGAAGAAGCCCGACTCCTCCGACGACAGGA
AGAAGCCCGACT

Coding sequence (CDS) from alignment at L-digitata_M_contig10026:1079..9390+

>mRNA_L-digitata_M_contig10026.1.1 ID=mRNA_L-digitata_M_contig10026.1.1|Name=mRNA_L-digitata_M_contig10026.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=1110bp|location=Sequence derived from alignment at L-digitata_M_contig10026:1079..9390+ (Laminaria digitata LdigPH10_18mv male)
GGCCACTGCATCTCAGCCGCCCGTCTCTGCCGAGAGCATATACTGAGAGC
GTCGGGCGCAGCACCCCCTCCCAACCTTCTCAGGCAGAGTGATCGAGGGA
CTACCACGACGATGAAGACCTCTTTCTGCGCTGCTGCTGGGCTCCTCGCC
TCGGGCTTCCTCGTGGCTCCTGTTGTGCAGGCTTGGGAGGATATGGATCC
CCTCACGGCTCAGCAACAAATCACTCTGTTCAACGACGAGGACTTCGCGT
TCAGCCTCGGCGGCCCCGACCCAGACAACCTCGTCGACAACATCCAGCTC
CGTGGCGTTAACCTCAACCAGCTCCCCGCCCTCGAGGGGCAGGGCATCTC
CATGACCCTCGTTAACCTCGGACCCTGCGCCATCAACCTCCCCCACATCC
ACCCCCGCGCCACCGAGATGCTTTACGTGATCGGGGGCGACCTGCTGCGG
GTAGCGTTCGTCGAGGAGAACGGCGGCGAGGGTGCCGTGGTCAACGACCT
CTACCAGGGGGACGTGGCCTTCTTCCCCCAGGGCCTCATCCACTACCAGC
AGAACCTCGGCTGCAACCCGGTGAACTTCCTGGCTGCGCTTAACTCGGAG
GACCCCGGGGTGGTGACCATCACGACTCGCTTCTTCGAGCTGCCCAGCGA
GGCCATCCAGGCGTCACTGAACTTCGATGACCCCACCCTCAAGGCTCTCA
TCGAGGGGCTGCCGGAGGCTCCCGCCCTGGCTCAGCGCCAGTGCTTGAAG
GCTTGCGGCCTTTACAAAGACGACGGCAAGAAGGACAGCTCCGACGACAA
GAAGGACTCCTCAGATGACAAGAAGAAGCCGGACTCCTCGGATGACAAGA
AGGGCGAGTCCCGGGACAAGAAGGACAGCTCGGACGACAAGAAGATGGAC
AGCTCGGATGACAGGAAGAAACCCGACTCCTCCGATGACAAGAAGATGGA
CAGCTCGGACGACAGGAAGAAGCCCGACTCCTCTGATGACAAGAAGATGG
ACAGCTCGGACGACAGGAAGAAGCCCGACTCCTCCGACGACAGGAAGAAG
CCCGACTCCTCCGACGACAGGAAGAAGCCCGACTCCTCCGACGACAGGAA
GAAGCCCGAC