prot_L-digitata_M_contig100225.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100225.1.1
Unique Nameprot_L-digitata_M_contig100225.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length60
Homology
BLAST of mRNA_L-digitata_M_contig100225.1.1 vs. uniprot
Match: A0A6H5JE14_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE14_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 2.480e-33
Identity = 51/58 (87.93%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    2 AAPLETNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPRKPPSVMILTPNGRFACSR 59
            A P++ NILEWHYVITGTKGSPYEGGHYHGKLKFPPEYP KPPSVM++TPNGRFACSR
Sbjct:   27 AMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSR 84          
BLAST of mRNA_L-digitata_M_contig100225.1.1 vs. uniprot
Match: W2KBB3_PHYPR (UBC core domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2KBB3_PHYPR)

HSP 1 Score: 116 bits (290), Expect = 4.680e-31
Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = 0
Query:    1 QAAPLETNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPRKPPSVMILTPNGRFACSR 59
            QA PLETNILEWHYVITGTKG+PYEGG YHGKLKFPPEYP KPPSVM++TPNGRF  ++
Sbjct:   26 QAVPLETNILEWHYVITGTKGTPYEGGFYHGKLKFPPEYPMKPPSVMMITPNGRFKTNQ 84          
BLAST of mRNA_L-digitata_M_contig100225.1.1 vs. uniprot
Match: A0A0P1AWA5_PLAHL (Ubiquitin-conjugating enzyme e2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWA5_PLAHL)

HSP 1 Score: 115 bits (287), Expect = 1.200e-30
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0
Query:    1 QAAPLETNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPRKPPSVMILTPNGRFACSR 59
            QA PLETNILEWHYVITGTKG+PYEGG YHG+LKFPPEYP KPPSVM++TPNGRF  ++
Sbjct:   22 QAVPLETNILEWHYVITGTKGTPYEGGFYHGRLKFPPEYPMKPPSVMMITPNGRFKTNQ 80          
BLAST of mRNA_L-digitata_M_contig100225.1.1 vs. uniprot
Match: A0A484E228_BRELC (UBC core domain-containing protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E228_BRELC)

HSP 1 Score: 115 bits (287), Expect = 1.360e-30
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 QAAPLETNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPRKPPSVMILTPNGRFACSR 59
            QA PLETNILEWHYVITGT GSPYEGG YHGKLKFPPEYP KPPSVM++TPNGRF  ++
Sbjct:   26 QAVPLETNILEWHYVITGTTGSPYEGGFYHGKLKFPPEYPMKPPSVMMITPNGRFKTNQ 84          
BLAST of mRNA_L-digitata_M_contig100225.1.1 vs. uniprot
Match: A0A3F2RXI9_9STRA (UBC core domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXI9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.390e-30
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0
Query:    1 QAAPLETNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPRKPPSVMILTPNGRFACSR 59
            QA P+ETNILEWHYVITGTKG+PYEGG+YHGKLKFPPEYP KPPSVM+ TPNGRF  ++
Sbjct:   26 QAVPVETNILEWHYVITGTKGTPYEGGYYHGKLKFPPEYPMKPPSVMMTTPNGRFKTNQ 84          
BLAST of mRNA_L-digitata_M_contig100225.1.1 vs. uniprot
Match: H3GEL4_PHYRM (UBC core domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GEL4_PHYRM)

HSP 1 Score: 115 bits (287), Expect = 1.390e-30
Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 QAAPLETNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPRKPPSVMILTPNGRFACSR 59
            QA P+ETNILEWHYVITGTKG+PYEGG+YHGKLKFPPEYP KPP+VM++TPNGRF  ++
Sbjct:   26 QAVPVETNILEWHYVITGTKGTPYEGGYYHGKLKFPPEYPMKPPAVMMITPNGRFKTNQ 84          
BLAST of mRNA_L-digitata_M_contig100225.1.1 vs. uniprot
Match: A0A3R7J076_9STRA (UBC core domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J076_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.310e-30
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0
Query:    1 QAAPLETNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPRKPPSVMILTPNGRFACSR 59
            +AAPLE NILEWHYVITGT+G+PYEGG YHGKLKFPPEYP KPPSV++LTPNGRF  +R
Sbjct:   26 RAAPLEKNILEWHYVITGTEGTPYEGGFYHGKLKFPPEYPMKPPSVLMLTPNGRFDVNR 84          
BLAST of mRNA_L-digitata_M_contig100225.1.1 vs. uniprot
Match: A0A662YDA8_9STRA (UBC core domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDA8_9STRA)

HSP 1 Score: 114 bits (284), Expect = 6.310e-30
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 QAAPLETNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPRKPPSVMILTPNGRFACSR 59
            QA PLETNILEWHYVITGT GSPYEGG+YHGKLKFPPEYP KPPSV++ TPNGRF  ++
Sbjct:   26 QAVPLETNILEWHYVITGTAGSPYEGGYYHGKLKFPPEYPMKPPSVLMCTPNGRFKTNQ 84          
BLAST of mRNA_L-digitata_M_contig100225.1.1 vs. uniprot
Match: D0NAC0_PHYIT (Ubiquitin-conjugating enzyme E2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NAC0_PHYIT)

HSP 1 Score: 111 bits (277), Expect = 1.270e-29
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 QAAPLETNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPRKPPSVMILTPNGRFACSR 59
            +AAPLE NILEWHYVITGT+G+PYEGG YHGKLKFPPEYP KPPSV++ TPNGRF  +R
Sbjct:   22 RAAPLENNILEWHYVITGTEGTPYEGGFYHGKLKFPPEYPMKPPSVIMCTPNGRFDINR 80          
BLAST of mRNA_L-digitata_M_contig100225.1.1 vs. uniprot
Match: W2FYI4_PHYPR (UBC core domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2FYI4_PHYPR)

HSP 1 Score: 111 bits (277), Expect = 1.310e-29
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 QAAPLETNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPRKPPSVMILTPNGRFACSR 59
            +AAPLE NILEWHYVITGT+G+PYEGG YHGKLKFPPEYP KPPSV++ TPNGRF  +R
Sbjct:   26 RAAPLEKNILEWHYVITGTEGTPYEGGFYHGKLKFPPEYPMKPPSVIMCTPNGRFEINR 84          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100225.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE14_9PHAE2.480e-3387.93UBC core domain-containing protein n=2 Tax=Ectocar... [more]
W2KBB3_PHYPR4.680e-3183.05UBC core domain-containing protein n=12 Tax=Phytop... [more]
A0A0P1AWA5_PLAHL1.200e-3081.36Ubiquitin-conjugating enzyme e2 n=1 Tax=Plasmopara... [more]
A0A484E228_BRELC1.360e-3083.05UBC core domain-containing protein n=2 Tax=Bremia ... [more]
A0A3F2RXI9_9STRA1.390e-3081.36UBC core domain-containing protein n=3 Tax=Phytoph... [more]
H3GEL4_PHYRM1.390e-3079.66UBC core domain-containing protein n=6 Tax=Phytoph... [more]
A0A3R7J076_9STRA4.310e-3081.36UBC core domain-containing protein n=3 Tax=Phytoph... [more]
A0A662YDA8_9STRA6.310e-3081.36UBC core domain-containing protein n=2 Tax=Nothoph... [more]
D0NAC0_PHYIT1.270e-2979.66Ubiquitin-conjugating enzyme E2 n=2 Tax=Phytophtho... [more]
W2FYI4_PHYPR1.310e-2979.66UBC core domain-containing protein n=10 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 4..50
e-value: 4.0E-12
score: 46.0
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..59
score: 22.032425
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..59
e-value: 2.0E-21
score: 78.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..55
NoneNo IPR availablePANTHERPTHR24067:SF257UBIQUITIN CONJUGATING ENZYMEcoord: 1..57
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 1..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100225contigL-digitata_M_contig100225:504..801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100225.1.1mRNA_L-digitata_M_contig100225.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100225 504..801 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100225.1.1 ID=prot_L-digitata_M_contig100225.1.1|Name=mRNA_L-digitata_M_contig100225.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=60bp
QAAPLETNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPRKPPSVMILT
PNGRFACSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD