prot_L-digitata_M_contig100200.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100200.1.1
Unique Nameprot_L-digitata_M_contig100200.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length247
Homology
BLAST of mRNA_L-digitata_M_contig100200.1.1 vs. uniprot
Match: A0A059ECM8_9PROT (Uncharacterized protein n=5 Tax=root TaxID=1 RepID=A0A059ECM8_9PROT)

HSP 1 Score: 404 bits (1038), Expect = 5.870e-141
Identity = 209/216 (96.76%), Postives = 211/216 (97.69%), Query Frame = 0
Query:   31 MSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLARSEAGAVIHEADAQAAQVISMIEGGTVIASDKHVISL 246
            MSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLAR E+GAVIHEADAQAAQVISMIE  TVIA+D  VISL
Sbjct:    1 MSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLARGESGAVIHEADAQAAQVISMIEDSTVIAADNQVISL 216          
BLAST of mRNA_L-digitata_M_contig100200.1.1 vs. uniprot
Match: A0A2E3ATP4_9PROT (Uncharacterized protein n=1 Tax=Hyphomonadaceae bacterium TaxID=2026748 RepID=A0A2E3ATP4_9PROT)

HSP 1 Score: 348 bits (893), Expect = 1.980e-118
Identity = 178/247 (72.06%), Postives = 202/247 (81.78%), Query Frame = 0
Query:    1 MADQLTGHGSRRNYLWPWLAPYPESPKCVVMSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLARSEAGAVIHEADAQAAQVISMIEGGTVIASDKHVISLH 247
            MA +   H  RRN L P LAP P+SPKC+ M+RTICLN+ IGELPGE GRAMDRAILDVVSRCSIACGGHAGD+ SMRATLKAA+AR+VVVGAHPSYPDRQNFGRK++ M  +ELE   RQQVRTLASLAR QGV +DHLKPHGALYNDA+RD  LAE +VR+ R+ARIRA++GPP+S L+KIAH TG DFLAEGFADR YA DGSL+ARSE GAVI    AQ AQVI ++E GTV A   H I L+
Sbjct:    1 MAGEHARHWCRRNNLRPRLAPDPQSPKCLGMNRTICLNAXIGELPGEAGRAMDRAILDVVSRCSIACGGHAGDEXSMRATLKAARARNVVVGAHPSYPDRQNFGRKTVAMSXEELEMSXRQQVRTLASLARLQGVTLDHLKPHGALYNDAARDSDLAEIVVRIARDARIRAIIGPPNSRLSKIAHGTGMDFLAEGFADRRYAGDGSLIARSEPGAVIEATQAQVAQVIGIVENGTVSAQGSHAIPLN 247          
BLAST of mRNA_L-digitata_M_contig100200.1.1 vs. uniprot
Match: A0A059DW94_9PROT (Uncharacterized protein n=4 Tax=Hyphomonas TaxID=85 RepID=A0A059DW94_9PROT)

HSP 1 Score: 289 bits (740), Expect = 1.270e-95
Identity = 146/216 (67.59%), Postives = 177/216 (81.94%), Query Frame = 0
Query:   31 MSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLARSEAGAVIHEADAQAAQVISMIEGGTVIASDKHVISL 246
            MSRTICLNSDIGELPGETGRA+DRAILDVVSRCSIACGGHAGD+DSMRATLKAAKAR VV GAHPSYPD++NFGR S+ +  ++LE+ LRQQVRTL+SLAR QGV +DHLKPHGALYND+++D  LA+ +VR+  + RIRAV+GPP+S+L K+A   G DF+AEGFADR Y+ DGSL+ R+E G+V+     Q AQV+ + E G V   D  +ISL
Sbjct:    1 MSRTICLNSDIGELPGETGRALDRAILDVVSRCSIACGGHAGDEDSMRATLKAAKARGVVAGAHPSYPDKKNFGRISVSLSPEDLEASLRQQVRTLSSLARLQGVVLDHLKPHGALYNDSAKDADLAQIVVRIAHQNRIRAVIGPPNSVLRKVALEAGLDFVAEGFADRQYSSDGSLVPRAEPGSVLTSVQEQVAQVLHISEEGCVTTRDGSMISL 216          
BLAST of mRNA_L-digitata_M_contig100200.1.1 vs. uniprot
Match: A0A062U741_9PROT (Uncharacterized protein n=1 Tax=Hyphomonas beringensis TaxID=1280946 RepID=A0A062U741_9PROT)

HSP 1 Score: 258 bits (660), Expect = 1.710e-83
Identity = 127/206 (61.65%), Postives = 160/206 (77.67%), Query Frame = 0
Query:   31 MSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLARSEAGAVIHEADAQAAQVISMIEGGTV 236
            M+RTICLN+DIGELPG+ GRAMDRAILDVVSRC+IACGGHAGD+ SM  TLKAAKAR+V+ GAHPSYPD++NFGR SM M  ++L+  LRQQVRT  S+AR  G  ++HLKPHGALYNDA+RD  LA  +  + REAR++ ++GPPDS L++ A      +L EGFADR Y  DGSL+ RSEAGAV+ +   Q +QV+  ++ G+V
Sbjct:    1 MTRTICLNADIGELPGQNGRAMDRAILDVVSRCNIACGGHAGDETSMSQTLKAAKARNVIAGAHPSYPDQENFGRVSMSMSSEDLKDTLRQQVRTFLSIARDIGAPVEHLKPHGALYNDAARDAGLASIVAAVAREARLKVLVGPPDSELSRAAAEFRLSYLPEGFADRRYQVDGSLMPRSEAGAVLSDIKDQISQVMEFVDNGSV 206          
BLAST of mRNA_L-digitata_M_contig100200.1.1 vs. uniprot
Match: A0A062U3Q4_9PROT (Uncharacterized protein n=1 Tax=Hyphomonas pacifica TaxID=1280941 RepID=A0A062U3Q4_9PROT)

HSP 1 Score: 251 bits (641), Expect = 1.300e-80
Identity = 126/206 (61.17%), Postives = 156/206 (75.73%), Query Frame = 0
Query:   31 MSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLARSEAGAVIHEADAQAAQVISMIEGGTV 236
            M+RTICLN+DIGELPG  GRAMDRAILDVVSRC+IACGGHAGD+ SM  TLKAAKAR+V+ GAHPSYPD++NFGR SM MP +EL+  LRQQVRT   +A   G  ++HLKPHGALYNDA+R+  LA  I  + REAR+  ++GPP+S L++ A     ++L EGFADR Y  DGSL  RSE GAV+ +   Q AQV+  ++ G+V
Sbjct:    1 MTRTICLNADIGELPGHNGRAMDRAILDVVSRCNIACGGHAGDETSMGQTLKAAKARNVIAGAHPSYPDKENFGRLSMAMPAEELKDTLRQQVRTFLRIALDIGAPVEHLKPHGALYNDAARNAGLASIIAAVAREARLNVLVGPPNSELSRAAAEFHLNYLPEGFADRRYQADGSLTPRSEPGAVLKDIKDQIAQVLEFVDQGSV 206          
BLAST of mRNA_L-digitata_M_contig100200.1.1 vs. uniprot
Match: A0A059FW14_9PROT (LamB/YcsF family protein n=2 Tax=Hyphomonas johnsonii TaxID=81031 RepID=A0A059FW14_9PROT)

HSP 1 Score: 234 bits (596), Expect = 9.100e-74
Identity = 120/218 (55.05%), Postives = 153/218 (70.18%), Query Frame = 0
Query:   29 VVMSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLARSEAGAVIHEADAQAAQVISMIEGGTVIASDKHVISL 246
            + +++ ICLN+DIGE+PGE GRA+DRA+LDVV+RCSIA GGHAGD  SM AT+KAA AR+V++GAHPSYPDR+ FGR++M M  D L   L +QVR LAS+AR +G A+ HLKPHGALYN A+RD  +A  +V  T  +RI  ++GPP S LA  A  +G  FLAEGFADRTY   G L  R+E GAVI     +  Q + ++E GTV       + L
Sbjct:    1 MAVTKAICLNADIGEMPGEPGRALDRAMLDVVTRCSIASGGHAGDAQSMAATVKAADARNVLIGAHPSYPDREGFGRRAMAMDADALRDSLLEQVRALASIARERGQALSHLKPHGALYNTAARDAGIARVVVEATLRSRIDLLIGPPHSKLAAAAADSGLPFLAEGFADRTYEASGDLTPRTEPGAVIETDADRIRQALQIVETGTVTTRTGETLQL 218          
BLAST of mRNA_L-digitata_M_contig100200.1.1 vs. uniprot
Match: A0A0F2QFD5_9PROT (Uncharacterized protein n=1 Tax=Hyphomonadaceae bacterium BRH_c29 TaxID=1629720 RepID=A0A0F2QFD5_9PROT)

HSP 1 Score: 228 bits (581), Expect = 1.450e-71
Identity = 113/208 (54.33%), Postives = 150/208 (72.12%), Query Frame = 0
Query:   31 MSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLARSEAGAVIHEADAQAAQVISMIEGGTVIA 238
            M   ICLN+D+GELPG+ GRA+DRAILDVV+RC+IACGGHAGD++SM AT++AA AR+V +GAHPSYPDR+ FGR    +   ELE  L  QVR L ++A  QG ++ HLKPHG+LYNDA++D +LA  +V + +   +  ++GPPDS L +     G  F+AE FADR+Y  DGSL  R+  GAV+ +   Q AQV+S++E G VIA
Sbjct:    1 MRTRICLNADVGELPGDNGRALDRAILDVVTRCNIACGGHAGDEESMAATIQAAVARNVRIGAHPSYPDREGFGRTRPSVSDQELEQSLLSQVRALKTIAHRQGASVAHLKPHGSLYNDAAKDESLAGIVVSICQRVGVPELLGPPDSALERKTREAGLVFVAEAFADRSYEADGSLTPRALPGAVMADEAMQLAQVVSIVEAGEVIA 208          
BLAST of mRNA_L-digitata_M_contig100200.1.1 vs. uniprot
Match: A0A059G643_9PROT (LamB/YcsF family protein n=1 Tax=Hyphomonas oceanitis SCH89 TaxID=1280953 RepID=A0A059G643_9PROT)

HSP 1 Score: 228 bits (580), Expect = 2.260e-71
Identity = 118/216 (54.63%), Postives = 149/216 (68.98%), Query Frame = 0
Query:   31 MSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLARSEAGAVIHEADAQAAQVISMIEGGTVIASDKHVISL 246
            M +TICLN+DIGELPG   RA+DRAILDVVSRCSIACGGHAGD  SM AT+KAA AR V++GAHPSYPDR+ FGRK M M +++L + L QQVR LA++ R +G ++ HLKPHGALYN A+ D  +A  IV +T ++RI  ++GPP S L   A   G D+L+EGFADR Y   G+L+ RS  GAV+     +  Q + +   G V A     I L
Sbjct:    1 MKKTICLNADIGELPGSNARALDRAILDVVSRCSIACGGHAGDQTSMAATVKAAYARGVLMGAHPSYPDREGFGRKPMAMSREDLSATLSQQVRALAAITRERGASLSHLKPHGALYNTAAGDEGIARTIVDVTIQSRIPLLIGPPRSCLESAASDAGLDYLSEGFADRAYETSGALMPRSTTGAVLETDAERIRQAVQIAATGKVSARTGETIDL 216          
BLAST of mRNA_L-digitata_M_contig100200.1.1 vs. uniprot
Match: A0A0F2RCN9_9PROT (Uncharacterized protein n=1 Tax=Hyphomonas sp. BRH_c22 TaxID=1629710 RepID=A0A0F2RCN9_9PROT)

HSP 1 Score: 228 bits (580), Expect = 2.260e-71
Identity = 120/216 (55.56%), Postives = 150/216 (69.44%), Query Frame = 0
Query:   31 MSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLARSEAGAVIHEADAQAAQVISMIEGGTVIASDKHVISL 246
            M R ICLN+DIGELPG+ GRA+DRAILDVV+RCSIA GGHAGD +SM AT+KAA AR+V++GAHPSYPDR+ FGR +M + + +L   L QQVR LA++AR +GV I HLKPHGALYN A+RD   A+ IV +T ++RI  ++GPP S LA  AH  G  +LAEGFADR Y   G L  R+  GAVI   + +  Q + +   G V       I L
Sbjct:    1 MIREICLNADIGELPGDNGRALDRAILDVVTRCSIASGGHAGDQESMAATVKAADARNVLIGAHPSYPDREGFGRNAMTLSRADLSITLLQQVRALAAIARERGVPIAHLKPHGALYNTAARDEDTAQTIVDVTIQSRIPLLIGPPTSRLALAAHHAGLPYLAEGFADRAYEASGELTPRTMEGAVIAADEDRVRQAVQIASTGQVTTRTGETIQL 216          
BLAST of mRNA_L-digitata_M_contig100200.1.1 vs. uniprot
Match: A0A069E1Q3_9PROT (LamB/YcsF family protein n=4 Tax=Hyphomonas TaxID=85 RepID=A0A069E1Q3_9PROT)

HSP 1 Score: 224 bits (572), Expect = 3.550e-70
Identity = 115/210 (54.76%), Postives = 145/210 (69.05%), Query Frame = 0
Query:   29 VVMSRTICLNSDIGELPGETGRAMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDRQNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDASRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRTYARDGSLLARSEAGAVIHEADAQAAQVISMIEGGTVIA 238
            + MS  ICLN+D+GELPG+ GRA+DRAILDVV+RC+IACGGHAGDD+SM AT+ AA AR V+ GAHPSYPDR+ FGR    +  + LE  L  QVRTL ++A GQG  + HLKPHG+LYNDA++D +LAE +V +     I  ++GPPDS L   A   G  F AE FADR+Y  DG L  R+  GAV+ +   Q  Q +S+I  G V A
Sbjct:    1 MAMSTRICLNADVGELPGDNGRALDRAILDVVTRCNIACGGHAGDDESMAATIHAAVARKVLTGAHPSYPDREGFGRARPNISNEALEQSLLSQVRTLKAIAHGQGATVAHLKPHGSLYNDAAKDESLAEMVVSICLRLGIPELLGPPDSALELKARNVGLVFAAEAFADRSYEADGHLTPRALPGAVMTDEAKQLEQALSIIVAGEVSA 210          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100200.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A059ECM8_9PROT5.870e-14196.76Uncharacterized protein n=5 Tax=root TaxID=1 RepID... [more]
A0A2E3ATP4_9PROT1.980e-11872.06Uncharacterized protein n=1 Tax=Hyphomonadaceae ba... [more]
A0A059DW94_9PROT1.270e-9567.59Uncharacterized protein n=4 Tax=Hyphomonas TaxID=8... [more]
A0A062U741_9PROT1.710e-8361.65Uncharacterized protein n=1 Tax=Hyphomonas beringe... [more]
A0A062U3Q4_9PROT1.300e-8061.17Uncharacterized protein n=1 Tax=Hyphomonas pacific... [more]
A0A059FW14_9PROT9.100e-7455.05LamB/YcsF family protein n=2 Tax=Hyphomonas johnso... [more]
A0A0F2QFD5_9PROT1.450e-7154.33Uncharacterized protein n=1 Tax=Hyphomonadaceae ba... [more]
A0A059G643_9PROT2.260e-7154.63LamB/YcsF family protein n=1 Tax=Hyphomonas oceani... [more]
A0A0F2RCN9_9PROT2.260e-7155.56Uncharacterized protein n=1 Tax=Hyphomonas sp. BRH... [more]
A0A069E1Q3_9PROT3.550e-7054.76LamB/YcsF family protein n=4 Tax=Hyphomonas TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005501LamB/YcsF/PxpA-likePFAMPF03746LamB_YcsFcoord: 35..246
e-value: 9.7E-68
score: 228.4
IPR005501LamB/YcsF/PxpA-likePANTHERPTHR30292UNCHARACTERIZED PROTEIN YBGL-RELATEDcoord: 33..246
NoneNo IPR availableGENE3D3.20.20.370Glycoside hydrolase/deacetylasecoord: 33..247
e-value: 2.3E-72
score: 245.5
NoneNo IPR availableCDDcd10801LamB_YcsF_like_1coord: 35..247
e-value: 1.59407E-91
score: 267.503
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrelSUPERFAMILY88713Glycoside hydrolase/deacetylasecoord: 34..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100200contigL-digitata_M_contig100200:202..942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100200.1.1mRNA_L-digitata_M_contig100200.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100200 2..942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100200.1.1 ID=prot_L-digitata_M_contig100200.1.1|Name=mRNA_L-digitata_M_contig100200.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=247bp
MADQLTGHGSRRNYLWPWLAPYPESPKCVVMSRTICLNSDIGELPGETGR
AMDRAILDVVSRCSIACGGHAGDDDSMRATLKAAKARHVVVGAHPSYPDR
QNFGRKSMKMPQDELESLLRQQVRTLASLARGQGVAIDHLKPHGALYNDA
SRDPTLAEFIVRLTREARIRAVMGPPDSMLAKIAHATGTDFLAEGFADRT
YARDGSLLARSEAGAVIHEADAQAAQVISMIEGGTVIASDKHVISLH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005501LamB/YcsF/PxpA-like
IPR011330Glyco_hydro/deAcase_b/a-brl