prot_L-digitata_M_contig10019.3.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10019.3.1
Unique Nameprot_L-digitata_M_contig10019.3.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length815
Homology
BLAST of mRNA_L-digitata_M_contig10019.3.1 vs. uniprot
Match: A0A6H5KJR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJR7_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 1.690e-87
Identity = 340/864 (39.35%), Postives = 396/864 (45.83%), Query Frame = 0
Query:    1 RASVGRSNKLSVFDAMADLDLAVGQEEWNDFADESTAPPRSPTXXXXXXXXXXXXXXXXXXXALPEATDSLAAAPGEELVETVGVASTVDGSATVAAAKETEGIDGAEPTPPE----------------PFIAGEGWPFSAGEG-VEAGAEAVVGGGSGGADGAVKAESEDDDWGDFEDAGAGGGQRPSDQPRDGEETEGK--REGNSVPLPDPEN--------SEDEWGGFVDVPVALALAEEEPATTGGAGSGXXXXXXXXXXXXXPFAAISPPXXXSRPQPLQDGSGFGETSSPAGGGDEGGEGTEAPQVSTQHIGEALFGTMGGSGXXXXXXXXXXXXXVAGLPLSLRDLRDALAGRGRLEEAVEVQRRMELPT-PTGTAGAGVGFTGETPDASNFSGEKGDEEGDGGG---DGDLERWRAAA--ELPPAPTLEQLAGAVSEVDAARGEKFRERFVAGRPPVEEEALAGGGAV-SLGRAVKRQRAARRAVSLSAALHLPAAAEAVAAGGGGGAEAEEG---GL---GGAEGVYHGVLDIDLGLGSTGGRLPPSLSDWASMVAYVARVAEDGLDALKEGGSVAGAGRS-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTGLXXXXXXXKGDGTDGDVVREVALSARFVAFSRGLREAVRVCRMLQAAAEDG--LETVDGFAAMERAWAEFRRRARQAAALRWPHGADGDGDXXXXXXXXXATEYYPDVFGPEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSGS-VKAVREAGVGRAPAG--SALCAVCLQPLEVFGGGGRPA---------PDVVEYCGVRYLAAAVNLWVNVVNKPPPGPLP 809
            RAS  R+ KLSVFD MADLDLAVGQE+WNDFADE+TAPPRSPT  XXXXXXXXXX       A      ++  A      +  G    +D    V                                  P +  +G P  + EG V A A A +  G+  A  A  A+ +DD+WGDF DA A G      Q   G E E    RE N+                 ++EWG F D P A A  EE     G A S              PFA I P   X            G T+          E  EA ++ ++           G  XXXXXXXXX      GLPLSLR LRDALA +GRLEEAVEVQRRMELP+ P  T    V ++ E   A + +        DGGG   D DLERWR AA  +L P PT+E LA  +S  DAARGEKFRERFV GRPPVEEEA        +L  AVKRQR+ARRAV L + L     A   A  G    + E+G   GL   G  E      L++DLGL +   R PPSL+DWA+M++YV  +A  G++AL  GG         A                                 GL         DG  G V REVA S  F +F RGLREA++VCRMLQA+AED   L+ VDGFAAMERAWAE RR AR+A             D              P VFG ED                                           S V A+REA V  AP    SALC V LQPL VF GG             P VVEYCGVRYLA A NLWVNV++KPPP P P
Sbjct:  390 RASSSRT-KLSVFDEMADLDLAVGQEDWNDFADETTAPPRSPTPSXXXXXXXXXXATEEVVKAAVVEEPAIDDAICNSDADIRGEPRPLDQDPGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHAWPGLEQQGMPLFSSEGAVAASAHASIADGAAPAAAAEGAQGQDDEWGDFLDATAEGEGTTGQQHLAGPEGEATAVREDNAATXXXXXXXXXXXXXXGDEEWGTFADAPEAAA-GEEAGLAIGDASSTGGSREAPPEEAVDPFADIEPTTPXXXXXXXXX---XGATA----------EDEEAGRLGSEEX--------XGXXXXXXXXXXXTTVTAPGLPLSLRGLRDALAKQGRLEEAVEVQRRMELPSSPPRTID--VPYSPEDVTAEDANAHA-----DGGGEAEDADLERWRGAAAGDLRPFPTVEDLAATMSAADAARGEKFRERFVRGRPPVEEEAXXXXXXXXALDVAVKRQRSARRAVCLLSMLD----AAGTAGDGAADKDVEDGRDRGLTSGGAVEKEEEDKLELDLGLDTRRARSPPSLADWAAMMSYVTSMAGKGIEALAGGGXXXXXXSDRAAATPASLTRPSSPFSRPTTEREGADCRAEIDSAGLPPDAAALASDG--GAVRREVARSQEFESFCRGLREAIKVCRMLQASAEDACCLQGVDGFAAMERAWAELRRSAREAXXXXXXXXXXXXXDL-------------PSVFGVEDGEEGVCMEKEAQGVGGSPGAASGLVGGKGERTAVGGGVAPAGSSIVAAIREACVETAPPAEDSALCGVSLQPLAVFSGGAXXXXXXXXXVEPPGVVEYCGVRYLACAFNLWVNVLDKPPPRPSP 1204          
BLAST of mRNA_L-digitata_M_contig10019.3.1 vs. uniprot
Match: D8LT09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT09_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 1.160e-80
Identity = 225/516 (43.60%), Postives = 264/516 (51.16%), Query Frame = 0
Query:  319 GLPLSLRDLRDALAGRGRLEEAVEVQRRMELPTPTGTAGAGVGFTGETPDASNFSGEKGDEEGDGGGDGDLERWRAAA--ELPPAPTLEQLAGAVSEVDAARGEKFRERFVAGRPPVEEEALAGGGAVS-LGRAVKRQRAARRAVSLSAALHLPAAAEAVAAGGGGGAEAE-----EGGL---GGAEGVYHGVLDIDLGLGSTGGRLPPSLSDWASMVAYVARVAEDGLDALKEGG--SVAGAGRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTGLXXXXXXXKGDGTDGDVVREVALSARFVAFSRGLREAVRVCRMLQAAAEDG--LETVDGFAAMERAWAEFRRRARQAAALRWPHGADGDGDXXXXXXXXXATEYYPDVFGPEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL-SGSVKAVREAGVGRAPAG--SALCAVCLQPLEVFGGG-------GRPAPDVVEYCGVRYLAAAVNLWVNVVNKPPPGPLP 809
            GLPLSLR LRDALA RGRLEEAVEVQRRMELP+        V ++ E   A + +            D DLERWRA A  +L P PT+E+LA  +S  DAARGEKFRERFV GRPPVEEE          LG AV+RQR+ARRAV L + L      +A    G G A+ +     +GGL   GG E      L++DLGL +   R PPSL+DWA+M++YV  +A  G++AL  GG  S +G+ R+A                                 G+         DG    V REVA S    +F RGLREAV+VCRMLQA+AEDG  L+ VDGFAAMERAWAE RR AR+A          GD                P VFG ED                                          S SV A+REA V   P    SALC V LQPL VF GG       G   P VVEYCGVRYLA A+NLWVNV++KPPPGP P
Sbjct:  181 GLPLSLRGLRDALAKRGRLEEAVEVQRRMELPSTPPPRAIDVPYSPEDVTADDDANXXXXXXXXXXXDADLERWRAVAAEDLRPFPTVEELAATMSAADAARGEKFRERFVRGRPPVEEEXXXXXXXXXXLGVAVRRQRSARRAVCLLSML------DAAGTAGDGAADKDLEDGRDGGLTSGGGDEKEEQDKLELDLGLDTRRARSPPSLADWAAMMSYVTSMAARGIEALAGGGAGSRSGSDRAAATPASPTRPSSPFTRPTAEREGADCRAEIDS-AGVPPDADALASDGVA--VRREVARSQELESFCRGLREAVKVCRMLQASAEDGCCLQGVDGFAAMERAWAELRRSAREAXXXXXXXXXXGD---------------LPSVFGVEDGEEGVCMGKEAQGVGGSPGAASGLVGGKDERTAVGGGVAPAGSSSVAAIREACVETPPPAEDSALCGVSLQPLAVFSGGAGXXXXSGVEPPGVVEYCGVRYLACAINLWVNVLDKPPPGPSP 672          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10019.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJR7_9PHAE1.690e-8739.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT09_ECTSI1.160e-8043.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 666..709
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10019contigL-digitata_M_contig10019:6012..8741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10019.3.1mRNA_L-digitata_M_contig10019.3.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10019 6012..8741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10019.3.1 ID=prot_L-digitata_M_contig10019.3.1|Name=mRNA_L-digitata_M_contig10019.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=815bp
RASVGRSNKLSVFDAMADLDLAVGQEEWNDFADESTAPPRSPTPPPPPSP
PPSPPPPSSSPPALPEATDSLAAAPGEELVETVGVASTVDGSATVAAAKE
TEGIDGAEPTPPEPFIAGEGWPFSAGEGVEAGAEAVVGGGSGGADGAVKA
ESEDDDWGDFEDAGAGGGQRPSDQPRDGEETEGKREGNSVPLPDPENSED
EWGGFVDVPVALALAEEEPATTGGAGSGGSTDAPELPEVDDPFAAISPPT
PPSRPQPLQDGSGFGETSSPAGGGDEGGEGTEAPQVSTQHIGEALFGTMG
GSGGGPLGGSAAAAAAVAGLPLSLRDLRDALAGRGRLEEAVEVQRRMELP
TPTGTAGAGVGFTGETPDASNFSGEKGDEEGDGGGDGDLERWRAAAELPP
APTLEQLAGAVSEVDAARGEKFRERFVAGRPPVEEEALAGGGAVSLGRAV
KRQRAARRAVSLSAALHLPAAAEAVAAGGGGGAEAEEGGLGGAEGVYHGV
LDIDLGLGSTGGRLPPSLSDWASMVAYVARVAEDGLDALKEGGSVAGAGR
SAETETETENPGMGAGLASFGGGGGSGVGVGVGDTGLGGQGSGEKGDGTD
GDVVREVALSARFVAFSRGLREAVRVCRMLQAAAEDGLETVDGFAAMERA
WAEFRRRARQAAALRWPHGADGDGDGGGGSGGGGATEYYPDVFGPEDDNN
EEEKENGSLEESVFSSVLLSGGGKGRNRGNGGGGGGVLSGSVKAVREAGV
GRAPAGSALCAVCLQPLEVFGGGGRPAPDVVEYCGVRYLAAAVNLWVNVV
NKPPPGPLPLDSHD*
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