prot_L-digitata_M_contig10018.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10018.1.1
Unique Nameprot_L-digitata_M_contig10018.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length164
Homology
BLAST of mRNA_L-digitata_M_contig10018.1.1 vs. uniprot
Match: D7FUL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL6_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 3.260e-51
Identity = 90/164 (54.88%), Postives = 119/164 (72.56%), Query Frame = 0
Query:    1 AFSHLRRIPSVVGSIQTVYRCTALAIALSCCSAPFWNDVRVTGAYFWVTYSGNARFARWISLSFLTTQAVAGFLMALILIFNVTGPRPASLIVCCRTSKRVKVYFVLTILRTCVYLYNGAVLFVDEFAVFRVGKKEMVMIGWCSKYVNVIADTFVLFSAFQEID 164
            +F  LRR+P+++GS +    C  LAI  +  SA FWN V +TG YFWVT +GN    RWISLSF  TQ VAG LMAL ++F V+G R +SL VCC+TS+RVK +F+LTI  T VYLYNG VL  DEF+ F++ K+ +V+IGWCS+YV+VIADT ++F AF  ++
Sbjct:   95 SFVKLRRVPTMIGSTRAACVCLVLAILATVLSAVFWNGVLITGGYFWVTNTGNESHGRWISLSFGATQTVAGMLMALAVLFTVSGERFSSLKVCCKTSQRVKFHFILTIFGTFVYLYNGIVLMFDEFSDFKISKR-LVIIGWCSRYVHVIADTGIIFGAFYALE 257          
BLAST of mRNA_L-digitata_M_contig10018.1.1 vs. uniprot
Match: A0A6H5JRD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD9_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 1.320e-48
Identity = 86/164 (52.44%), Postives = 116/164 (70.73%), Query Frame = 0
Query:    1 AFSHLRRIPSVVGSIQTVYRCTALAIALSCCSAPFWNDVRVTGAYFWVTYSGNARFARWISLSFLTTQAVAGFLMALILIFNVTGPRPASLIVCCRTSKRVKVYFVLTILRTCVYLYNGAVLFVDEFAVFRVGKKEMVMIGWCSKYVNVIADTFVLFSAFQEID 164
            +F  LRR+P+++GS +    C  LA+  +  SA FWN V +TG YFWVT + N    RWISLSF  TQ VAG LMAL ++F +TG R +SL VCC+TS+RVK +F+LTI  T VYLYNG VL  DEF+ F++  + +V+IGWCS+Y +VIADT ++F AF  ++
Sbjct:   95 SFVTLRRVPTMIGSTRAACVCVVLAVLATVLSAVFWNGVLITGGYFWVTNTSNESHGRWISLSFGATQTVAGILMALTVLFTMTGERFSSLRVCCKTSQRVKFHFILTIFGTFVYLYNGIVLMFDEFSDFKISTR-LVIIGWCSRYAHVIADTGIIFGAFYALE 257          
BLAST of mRNA_L-digitata_M_contig10018.1.1 vs. uniprot
Match: D7FUL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL8_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 7.210e-32
Identity = 59/102 (57.84%), Postives = 76/102 (74.51%), Query Frame = 0
Query:    1 AFSHLRRIPSVVGSIQTVYRCTALAIALSCCSAPFWNDVRVTGAYFWVTYSGNARFARWISLSFLTTQAVAGFLMALILIFNVTGPRPASLIVCCRTSKRVK 102
            AFS +RR+P V+GS + ++ C  +A+ L+  SAPFWNDV VTG+YFW+T   +   ARWISLSF+TTQ +AG LMAL L+F  TG R  SL+VC RTSKR+K
Sbjct:   70 AFSKMRRVPRVIGSSRVIWSCVFVAMGLTLLSAPFWNDVLVTGSYFWITNRNDPNLARWISLSFVTTQGIAGALMALTLVFVATGKRRKSLLVCIRTSKRMK 171          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10018.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUL6_ECTSI3.260e-5154.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRD9_9PHAE1.320e-4852.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUL8_ECTSI7.210e-3257.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10018contigL-digitata_M_contig10018:4290..9293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10018.1.1mRNA_L-digitata_M_contig10018.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10018 4290..9293 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10018.1.1 ID=prot_L-digitata_M_contig10018.1.1|Name=mRNA_L-digitata_M_contig10018.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=164bp
AFSHLRRIPSVVGSIQTVYRCTALAIALSCCSAPFWNDVRVTGAYFWVTY
SGNARFARWISLSFLTTQAVAGFLMALILIFNVTGPRPASLIVCCRTSKR
VKVYFVLTILRTCVYLYNGAVLFVDEFAVFRVGKKEMVMIGWCSKYVNVI
ADTFVLFSAFQEID
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