prot_L-digitata_M_contig10016.1.3 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-digitata_M_contig10016.1.3
Unique Name	prot_L-digitata_M_contig10016.1.3
Type	polypeptide
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length	477

Homology

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: D8LEZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ4_ECTSI)

HSP 1 Score: 691 bits (1782), Expect = 4.650e-232
Identity = 387/496 (78.02%), Postives = 411/496 (82.86%), Query Frame = 0

Query:    2 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGG-EGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDK-------VFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVA-AVSFPSHSGAXXXXXXXXTA-----------GVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLSLH 477
            +VHERHAGCDFLLGLLRAVLRRR DLKVVLMSATINPELFSRFFDGAPLIRVPGRM+PVEVRYVPT+ADNDIQEVVS+HDGEGQRKLRSR GGG EGKR +FDARPYVKLL+SIDTTTPRDERGDLLVFLSGM DMLAV+EGVREYVE KSPRRWVVLMLHSSLSVEEQDK       VFDASPLGTRKMILATNIAETSVTIDGVRFV DSGKAKEMSWDP SGV RSLQEFWVSRASAEQRKGRAGRTGPG+CFRLYAR TFDRL PFAEPEIRRCPLEGLVLQMKSLGL+DPRYFPYLSPPPPENLRAALE+LALLGATD A AVS P+ +     XXXXX             G AGL  P H +  P  P   + P+                        T   FDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAA++SGANP+AEF+S  G+  T+++ +
Sbjct:  487 EVHERHAGCDFLLGLLRAVLRRRPDLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSKHDGEGQRKLRSRGGGGGEGKRVMFDARPYVKLLESIDTTTPRDERGDLLVFLSGMSDMLAVTEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKARDFLGLVFDASPLGTRKMILATNIAETSVTIDGVRFVCDSGKAKEMSWDPASGV-RSLQEFWVSRASAEQRKGRAGRTGPGVCFRLYARSTFDRLPPFAEPEIRRCPLEGLVLQMKSLGLDDPRYFPYLSPPPPENLRAALESLALLGATDAASAVSVPAAAADEAAXXXXXXTEGAVAVGSDPRGGAGLGAP-HAERLPAAPESNAEPRRREEGTTAT--------------TTPPTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAAAASGANPVAEFASSHGDPFTVMNAY 966

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A6H5K4A6_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A6_9PHAE)

HSP 1 Score: 547 bits (1410), Expect = 8.880e-184
Identity = 319/485 (65.77%), Postives = 340/485 (70.10%), Query Frame = 0

Query:    2 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGG-EGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVA-AVSFPSHSG---------------AXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGE 469
            +VHERHAGCDFLLGLLRAVLRRR DLKVVLMSATINPELFSRFFDGAPLIRVPGRM+PVEVRYVPT+ADNDIQEVVSRHDGEGQRKLRSR GGG EGKR +FDARP+VKLL+SIDTTTPRDERGDLLVFLSGM DMLAV+EGVREYVE KSPRRWVVLMLHSSLSVEEQDK  D   L                                                         RKGRAGRTGPG+CFRLYAR TFDRL PFAEPEIRRCPLEGLVLQMKSLGL+DPR+FPYLSPPPPENLRAAL +LALLGATD A AVS P+ +                           G AGL  P H +  P  P   + P+                        T   FDDATARAPLTPLGRVLS LPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFD RAA+++SGANP+AEF+SP GE
Sbjct:  522 EVHERHAGCDFLLGLLRAVLRRRPDLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGGEGKRVMFDARPFVKLLESIDTTTPRDERGDLLVFLSGMSDMLAVTEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKARDFLGL---------------------------------------------------------RKGRAGRTGPGVCFRLYARSTFDRLPPFAEPEIRRCPLEGLVLQMKSLGLDDPRFFPYLSPPPPENLRAALGSLALLGATDPASAVSVPAAAADXXXXXXXXXXEAITEGAVAAGSDLRGGAGLGAP-HAERLPAAPESNAEPRRREQGTTAATI-------------TPPTFDDATARAPLTPLGRVLSKLPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDTRAASAASGANPVAEFASPHGE 935

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A8J4K430_EUDMI (Putative ATP-dependent RNA helicase DHX34 (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A8J4K430_EUDMI)

HSP 1 Score: 345 bits (884), Expect = 4.020e-108
Identity = 215/475 (45.26%), Postives = 266/475 (56.00%), Query Frame = 0

Query:    2 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLSL 476
            +VHERH   DFLLG+LR +L  R DLK+VLMSATIN  LFS +F GAP+++VPGR++P+ V Y P                    K  +   G  GK    D  PY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RW+VL LHS+LSV EQDKVFD  P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  +P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPP  +L  A+  L   GA                                                                          LD  +D      LTP+G +L+ LPVD  VGKML LG LFG +E  LT+AAALS Q+PF      +   A       SP G+ LTLL++
Sbjct:  278 EVHERHLHSDFLLGVLRRLLPARPDLKLVLMSATINISLFSGYFGGAPVLQVPGRIFPISVIYQPIP------------------KEEASAVGKLGKSERLDPLPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAYAA--RTQRWIVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQLKSMGLGDPRTFPFLEPPPASSLETAVRYLRDQGA--------------------------------------------------------------------------LDEAED------LTPIGNLLAQLPVDVVVGKMLVLGTLFGLAEPTLTVAAALSVQSPFLRPVHPNPDCATARRPLESPHGDPLTLLNI 651

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: UPI001C67EC2F (probable ATP-dependent RNA helicase DHX34 n=1 Tax=Tyto alba TaxID=56313 RepID=UPI001C67EC2F)

HSP 1 Score: 355 bits (910), Expect = 5.020e-108
Identity = 222/475 (46.74%), Postives = 270/475 (56.84%), Query Frame = 0

Query:    2 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLSL 476
            +VHERH  CDFLLG+LR +L  R DLK+VLMSATIN  LFS +F GAP+++VPGR++P+ V Y P                    K  + VGG  GK    D  PY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RWVVL LHS+LSV EQDKVFD  P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  +P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPP  +L  AL  L   GA                                                                          LD  +D      LT +G +L+ LPVD  VGKML LGALFG +E  LT+AAALS Q+PF   A  +   A       SP G+ LTLL+L
Sbjct:  271 EVHERHLHCDFLLGVLRRLLPARPDLKLVLMSATINIRLFSGYFGGAPVLQVPGRIFPISVIYQPIP------------------KEEAPVGGKWGKSERLDPLPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAYAA--RTQRWVVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDSLVLQLKSMGLGDPRSFPFLEPPPSSSLETALRYLKDQGA--------------------------------------------------------------------------LDEAED------LTLIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRSAHPNPDCATARRPLESPHGDPLTLLNL 644

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A7L0JZ23_CHATO (DHX34 helicase (Fragment) n=2 Tax=Anseriformes TaxID=8826 RepID=A0A7L0JZ23_CHATO)

HSP 1 Score: 354 bits (909), Expect = 1.420e-107
Identity = 218/474 (45.99%), Postives = 267/474 (56.33%), Query Frame = 0

Query:    2 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLS 475
            +VHERH   DFLLG+LR +L  R DLK+VLMSATIN  LFS +F GAP+++VPGR++P+ V Y P   +                      GG  GK    D RPY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RW+VL LHS+LSV EQDKVFD  P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  +P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPP  +L  A+  L   GA D A                                                                                  LTP+G +L+ LPVD  VGKML LGALFG +E  LT+AAALS Q+PF   A A+   A       SP G+ LTLL+
Sbjct:  284 EVHERHLHSDFLLGVLRRLLPARPDLKLVLMSATINIRLFSGYFGGAPVLQVPGRIFPISVIYEPIPKEEAAA-----------------AGGKTGKSERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQVYAA--HTQRWIVLPLHSTLSVTEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQLKSMGLGDPRTFPFLEPPPASSLETAVRYLREQGALDEA--------------------------------------------------------------------------------EELTPIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRLANANPDCATARRPLESPHGDPLTLLN 657

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A7K7BJT6_9AVES (DHX34 helicase (Fragment) n=1 Tax=Nothoprocta ornata TaxID=83376 RepID=A0A7K7BJT6_9AVES)

HSP 1 Score: 344 bits (883), Expect = 1.550e-107
Identity = 214/475 (45.05%), Postives = 268/475 (56.42%), Query Frame = 0

Query:    2 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLSL 476
            +VHERH   DFLLG+LR +L  R DLK++LMSATIN  LFS +F GAP+++VPGR +P+ V Y P   +                       GG+ +R   D RP++++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RWVVL LHS+LSV EQDKVFD  P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  +P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPPP +L  A+  L   GA D A                                                                                  LTP+G++L+ LPVD  VGK+L LGAL G +E  LT+AAALS Q+PF   A  +   A       SP G+ LTLL++
Sbjct:  156 EVHERHLHGDFLLGVLRRLLPARPDLKLILMSATINIGLFSSYFGGAPVLQVPGRSFPITVIYQPIPKEEAAP-------------------GGKTER--LDPRPFLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQPYAA--RTQRWVVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDVLVLQLKSMGLGDPRTFPFLEPPPPSSLETAVRYLREQGALDEA--------------------------------------------------------------------------------EELTPIGKLLAQLPVDVVVGKVLVLGALLGLAEPALTVAAALSVQSPFLRAAPGNPERATARRPLESPHGDPLTLLNV 526

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: S4R5D4_PETMA (DEAH (Asp-Glu-Ala-His) box polypeptide 34 n=5 Tax=Petromyzon marinus TaxID=7757 RepID=S4R5D4_PETMA)

HSP 1 Score: 352 bits (904), Expect = 1.960e-107
Identity = 210/476 (44.12%), Postives = 269/476 (56.51%), Query Frame = 0

Query:    2 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREY-VEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLSL 476
            +VHERH  CD LLG+LR +L  R DL++VLMSATIN +LFSR+   AP+++VPGR+YP++V Y P   +                          GK    D RPY++++QSID   P DERGDLLVFLSGM D+  V+E  + Y VE K   RW+VL LHS+LS E+QDKVFD +P G RK I++TNIAETSVTIDGVRF+ DSGK KEMS+DP + + R LQEFW+SRASAEQRKGRAGRTGPG+CFRLYA   +D L P+A PE++R PL+ +VLQMKS+GL DPR F +L PPP  +L  +++ L   GA D                                                                                 +  LTP+GRVL+ LP+D   GKML +G + G  E VLT+AAA+S Q+PF   A  +   +       S  G+ LTLL++
Sbjct:  223 EVHERHLHCDLLLGVLRELLPLRDDLRLVLMSATINIQLFSRYLGDAPVLQVPGRLYPIQVIYRPVPEEEKT-----------------------GKSERIDPRPYLRIMQSIDHKYPADERGDLLVFLSGMADIARVAEAAQSYAVETK---RWIVLQLHSTLSAEQQDKVFDLAPEGVRKCIVSTNIAETSVTIDGVRFIVDSGKVKEMSYDPKAKMQR-LQEFWISRASAEQRKGRAGRTGPGVCFRLYAESEYDALEPYAVPEVQRVPLDSVVLQMKSMGLGDPRLFGFLEPPPASSLETSMQFLQEQGALD--------------------------------------------------------------------------------EQEELTPIGRVLATLPLDVLTGKMLLVGCVLGAVEPVLTIAAAMSVQSPFHRNAHTNPDCSRARRSLESDHGDPLTLLNV 591

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A452H9F6_9SAUR (DExH-box helicase 34 n=3 Tax=Gopherus agassizii TaxID=38772 RepID=A0A452H9F6_9SAUR)

HSP 1 Score: 346 bits (887), Expect = 5.490e-107
Identity = 213/474 (44.94%), Postives = 265/474 (55.91%), Query Frame = 0

Query:    2 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLS 475
            +VHERH   DFLLG+LR +L  R DLK+VLMSATIN  LF+ +F GAP+++VPGR++P+ V Y P   +                          GK    D RPY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RWVVL LHS+LS+ EQDKVFD  P G RK I++TNIAETSVTIDGVRFV DSGK KE+S+DP + + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  AP+  PEI+R  L+ LVLQMKS+GL DPR FP+L PPP  +L  A+  L   GA D A                                                                                  LTP+G +L+ LPVD  +GKML LGALFG +  VLT+AAALS Q+PF     A+   A       SP G+ LTLL+
Sbjct:  290 EVHERHLHSDFLLGVLRRLLPSRPDLKLVLMSATINIRLFAGYFGGAPVVQVPGRLFPITVVYQPIPQEE---------------------AAASGKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAYAT--HTQRWVVLPLHSTLSLAEQDKVFDMPPSGVRKCIVSTNIAETSVTIDGVRFVLDSGKVKELSYDPQAKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIQRVALDALVLQMKSMGLGDPRTFPFLEPPPQSSLEMAVRYLREQGALDEA--------------------------------------------------------------------------------ESLTPIGSLLAQLPVDVVIGKMLVLGALFGLAGPVLTVAAALSVQSPFLRPVRANPDCATARRPLESPHGDPLTLLN 659

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: UPI0015D5EB47 (probable ATP-dependent RNA helicase DHX34 n=1 Tax=Cygnus atratus TaxID=8868 RepID=UPI0015D5EB47)

HSP 1 Score: 351 bits (901), Expect = 7.640e-107
Identity = 217/474 (45.78%), Postives = 266/474 (56.12%), Query Frame = 0

Query:    2 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLS 475
            +VHERH   DFLLG+LR +L  R DLK+VLMSATIN  LFS +F GAP+++VPGR++P+ V Y P   +                     V    GK    D RPY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RW+VL LHS+LSV EQDKVFD  P G RK ILATNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  +P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPP  +L  A+  L   GA D A                                                                                  LTP+G +L+ LPVD  VGKML LGALFG +E  LT+AAALS Q+PF   + A+   A       SP G+ LTLL+
Sbjct:  262 EVHERHLHGDFLLGVLRRLLPARPDLKLVLMSATINIRLFSDYFGGAPVLQVPGRIFPISVIYEPIPKEE--------------------VAAAAGKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVQEAAQVYAA--HTQRWIVLPLHSTLSVSEQDKVFDVPPPGVRKCILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQVKSMGLGDPRTFPFLEPPPAASLETAVRYLREQGALDEA--------------------------------------------------------------------------------EELTPIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRLSNANPDCATARRPLESPHGDPLTLLN 632

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A8C3GJ77_CAIMO (DExH-box helicase 34 n=1 Tax=Cairina moschata domestica TaxID=1240228 RepID=A0A8C3GJ77_CAIMO)

HSP 1 Score: 350 bits (899), Expect = 1.390e-106
Identity = 217/474 (45.78%), Postives = 265/474 (55.91%), Query Frame = 0

Query:    2 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLS 475
            +VHERH   DFLLG+LR +L  R DLK+VLMSATIN  LFS +F GAP+++VPGR++P+ V Y P   +                     V    GK    D RPY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RW+VL LHS+LSV EQDKVFD  P G RK ILATNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D   P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPP  +L  A+  L   GA D A                                                                                  LTP+G +L+ LPVD  VGKML LGALFG +E  LT+AAALS Q+PF   + A+   A       SP G+ LTLL+
Sbjct:  258 EVHERHLHGDFLLGVLRRLLPARPDLKLVLMSATINIRLFSDYFGGAPVLQVPGRIFPISVIYEPIPKEE--------------------VAAAAGKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVQEAAQVYAT--QTQRWIVLPLHSTLSVSEQDKVFDVPPPGVRKCILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFPPYPVPEIQRVALDALVLQVKSMGLGDPRTFPFLEPPPSASLETAVRYLRDQGALDEA--------------------------------------------------------------------------------EELTPIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRLSNANPDCATARRPLESPHGDPLTLLN 628

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot

BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LEZ4_ECTSI	4.650e-232	78.02	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K4A6_9PHAE	8.880e-184	65.77	Helicase ATP-binding domain-containing protein n=1...	[more]
A0A8J4K430_EUDMI	4.020e-108	45.26	Putative ATP-dependent RNA helicase DHX34 (Fragmen...	[more]
UPI001C67EC2F	5.020e-108	46.74	probable ATP-dependent RNA helicase DHX34 n=1 Tax=...	[more]
A0A7L0JZ23_CHATO	1.420e-107	45.99	DHX34 helicase (Fragment) n=2 Tax=Anseriformes Tax...	[more]
A0A7K7BJT6_9AVES	1.550e-107	45.05	DHX34 helicase (Fragment) n=1 Tax=Nothoprocta orna...	[more]
S4R5D4_PETMA	1.960e-107	44.12	DEAH (Asp-Glu-Ala-His) box polypeptide 34 n=5 Tax=...	[more]
A0A452H9F6_9SAUR	5.490e-107	44.94	DExH-box helicase 34 n=3 Tax=Gopherus agassizii Ta...	[more]
UPI0015D5EB47	7.640e-107	45.78	probable ATP-dependent RNA helicase DHX34 n=1 Tax=...	[more]
A0A8C3GJ77_CAIMO	1.390e-106	45.78	DExH-box helicase 34 n=1 Tax=Cairina moschata dome...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 304..474 e-value: 1.8E-7 score: 40.8
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 397..453 e-value: 3.5E-10 score: 40.1
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 145..244 e-value: 6.3E-15 score: 65.6
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 120..244 e-value: 1.2E-11 score: 44.9
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 109..284 score: 13.98953
IPR042035	DEAH helicase, winged-helix domain	GENE3D	1.10.10.2130		coord: 266..310 e-value: 7.4E-15 score: 56.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 57..261 e-value: 3.0E-51 score: 175.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..56 e-value: 9.4E-18 score: 66.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 110..317
None	No IPR available	GENE3D	1.20.120.1080		coord: 367..464 e-value: 2.7E-15 score: 58.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..384
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 362..377
None	No IPR available	PANTHER	PTHR18934:SF148	ATP-DEPENDENT RNA HELICASE DHX34-RELATED	coord: 3..458
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 3..458
None	No IPR available	CDD	cd18791	SF2_C_RHA	coord: 58..252 e-value: 9.86103E-69 score: 215.09

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig10016	contig	L-digitata_M_contig10016:536..8198 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig10016.1.3	mRNA_L-digitata_M_contig10016.1.3	Laminaria digitata LdigPH10_18mv male	mRNA	L-digitata_M_contig10016 536..8198 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-digitata_M_contig10016.1.3 ID=prot_L-digitata_M_contig10016.1.3|Name=mRNA_L-digitata_M_contig10016.1.3|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=477bp
MQVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPL
IRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRT
IFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGK
SPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVR
FVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFR
LYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPE
NLRAALEALALLGATDVAAVSFPSHSGAGAGAGAAATAGVAGLPVPPHLQ
TPPPLPPQQSFPQQPERQGSSHPPSSPQAAAAAAAAATLDAFDDATARAP
LTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARA
AASSSGANPIAEFSSPDGERLTLLSLH

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007502	Helicase-assoc_dom
IPR001650	Helicase_C
IPR042035	DEAH_win-hel_dom
IPR027417	P-loop_NTPase