mRNA_L-digitata_M_contig10016.1.3 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-digitata_M_contig10016.1.3
Unique Name	mRNA_L-digitata_M_contig10016.1.3
Type	mRNA
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))

Homology

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: D8LEZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ4_ECTSI)

HSP 1 Score: 691 bits (1782), Expect = 4.650e-232
Identity = 387/496 (78.02%), Postives = 411/496 (82.86%), Query Frame = 1

Query:    4 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGG-EGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDK-------VFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVA-AVSFPSHSGAXXXXXXXXTA-----------GVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLSLH 1431
            +VHERHAGCDFLLGLLRAVLRRR DLKVVLMSATINPELFSRFFDGAPLIRVPGRM+PVEVRYVPT+ADNDIQEVVS+HDGEGQRKLRSR GGG EGKR +FDARPYVKLL+SIDTTTPRDERGDLLVFLSGM DMLAV+EGVREYVE KSPRRWVVLMLHSSLSVEEQDK       VFDASPLGTRKMILATNIAETSVTIDGVRFV DSGKAKEMSWDP SGV RSLQEFWVSRASAEQRKGRAGRTGPG+CFRLYAR TFDRL PFAEPEIRRCPLEGLVLQMKSLGL+DPRYFPYLSPPPPENLRAALE+LALLGATD A AVS P+ +     XXXXX             G AGL  P H +  P  P   + P+                        T   FDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAA++SGANP+AEF+S  G+  T+++ +
Sbjct:  487 EVHERHAGCDFLLGLLRAVLRRRPDLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSKHDGEGQRKLRSRGGGGGEGKRVMFDARPYVKLLESIDTTTPRDERGDLLVFLSGMSDMLAVTEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKARDFLGLVFDASPLGTRKMILATNIAETSVTIDGVRFVCDSGKAKEMSWDPASGV-RSLQEFWVSRASAEQRKGRAGRTGPGVCFRLYARSTFDRLPPFAEPEIRRCPLEGLVLQMKSLGLDDPRYFPYLSPPPPENLRAALESLALLGATDAASAVSVPAAAADEAAXXXXXXTEGAVAVGSDPRGGAGLGAP-HAERLPAAPESNAEPRRREEGTTAT--------------TTPPTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAAAASGANPVAEFASSHGDPFTVMNAY 966

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A6H5K4A6_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A6_9PHAE)

HSP 1 Score: 547 bits (1410), Expect = 8.880e-184
Identity = 319/485 (65.77%), Postives = 340/485 (70.10%), Query Frame = 1

Query:    4 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGG-EGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVA-AVSFPSHSG---------------AXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGE 1407
            +VHERHAGCDFLLGLLRAVLRRR DLKVVLMSATINPELFSRFFDGAPLIRVPGRM+PVEVRYVPT+ADNDIQEVVSRHDGEGQRKLRSR GGG EGKR +FDARP+VKLL+SIDTTTPRDERGDLLVFLSGM DMLAV+EGVREYVE KSPRRWVVLMLHSSLSVEEQDK  D   L                                                         RKGRAGRTGPG+CFRLYAR TFDRL PFAEPEIRRCPLEGLVLQMKSLGL+DPR+FPYLSPPPPENLRAAL +LALLGATD A AVS P+ +                           G AGL  P H +  P  P   + P+                        T   FDDATARAPLTPLGRVLS LPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFD RAA+++SGANP+AEF+SP GE
Sbjct:  522 EVHERHAGCDFLLGLLRAVLRRRPDLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGGEGKRVMFDARPFVKLLESIDTTTPRDERGDLLVFLSGMSDMLAVTEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKARDFLGL---------------------------------------------------------RKGRAGRTGPGVCFRLYARSTFDRLPPFAEPEIRRCPLEGLVLQMKSLGLDDPRFFPYLSPPPPENLRAALGSLALLGATDPASAVSVPAAAADXXXXXXXXXXEAITEGAVAAGSDLRGGAGLGAP-HAERLPAAPESNAEPRRREQGTTAATI-------------TPPTFDDATARAPLTPLGRVLSKLPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDTRAASAASGANPVAEFASPHGE 935

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A8J4K430_EUDMI (Putative ATP-dependent RNA helicase DHX34 (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A8J4K430_EUDMI)

HSP 1 Score: 345 bits (884), Expect = 4.020e-108
Identity = 215/475 (45.26%), Postives = 266/475 (56.00%), Query Frame = 1

Query:    4 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLSL 1428
            +VHERH   DFLLG+LR +L  R DLK+VLMSATIN  LFS +F GAP+++VPGR++P+ V Y P                    K  +   G  GK    D  PY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RW+VL LHS+LSV EQDKVFD  P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  +P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPP  +L  A+  L   GA                                                                          LD  +D      LTP+G +L+ LPVD  VGKML LG LFG +E  LT+AAALS Q+PF      +   A       SP G+ LTLL++
Sbjct:  278 EVHERHLHSDFLLGVLRRLLPARPDLKLVLMSATINISLFSGYFGGAPVLQVPGRIFPISVIYQPIP------------------KEEASAVGKLGKSERLDPLPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAYAA--RTQRWIVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQLKSMGLGDPRTFPFLEPPPASSLETAVRYLRDQGA--------------------------------------------------------------------------LDEAED------LTPIGNLLAQLPVDVVVGKMLVLGTLFGLAEPTLTVAAALSVQSPFLRPVHPNPDCATARRPLESPHGDPLTLLNI 651

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: UPI001C67EC2F (probable ATP-dependent RNA helicase DHX34 n=1 Tax=Tyto alba TaxID=56313 RepID=UPI001C67EC2F)

HSP 1 Score: 355 bits (910), Expect = 5.020e-108
Identity = 222/475 (46.74%), Postives = 270/475 (56.84%), Query Frame = 1

Query:    4 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLSL 1428
            +VHERH  CDFLLG+LR +L  R DLK+VLMSATIN  LFS +F GAP+++VPGR++P+ V Y P                    K  + VGG  GK    D  PY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RWVVL LHS+LSV EQDKVFD  P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  +P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPP  +L  AL  L   GA                                                                          LD  +D      LT +G +L+ LPVD  VGKML LGALFG +E  LT+AAALS Q+PF   A  +   A       SP G+ LTLL+L
Sbjct:  271 EVHERHLHCDFLLGVLRRLLPARPDLKLVLMSATINIRLFSGYFGGAPVLQVPGRIFPISVIYQPIP------------------KEEAPVGGKWGKSERLDPLPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAYAA--RTQRWVVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDSLVLQLKSMGLGDPRSFPFLEPPPSSSLETALRYLKDQGA--------------------------------------------------------------------------LDEAED------LTLIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRSAHPNPDCATARRPLESPHGDPLTLLNL 644

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A7L0JZ23_CHATO (DHX34 helicase (Fragment) n=2 Tax=Anseriformes TaxID=8826 RepID=A0A7L0JZ23_CHATO)

HSP 1 Score: 354 bits (909), Expect = 1.420e-107
Identity = 218/474 (45.99%), Postives = 267/474 (56.33%), Query Frame = 1

Query:    4 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLS 1425
            +VHERH   DFLLG+LR +L  R DLK+VLMSATIN  LFS +F GAP+++VPGR++P+ V Y P   +                      GG  GK    D RPY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RW+VL LHS+LSV EQDKVFD  P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  +P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPP  +L  A+  L   GA D A                                                                                  LTP+G +L+ LPVD  VGKML LGALFG +E  LT+AAALS Q+PF   A A+   A       SP G+ LTLL+
Sbjct:  284 EVHERHLHSDFLLGVLRRLLPARPDLKLVLMSATINIRLFSGYFGGAPVLQVPGRIFPISVIYEPIPKEEAAA-----------------AGGKTGKSERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQVYAA--HTQRWIVLPLHSTLSVTEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQLKSMGLGDPRTFPFLEPPPASSLETAVRYLREQGALDEA--------------------------------------------------------------------------------EELTPIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRLANANPDCATARRPLESPHGDPLTLLN 657

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A7K7BJT6_9AVES (DHX34 helicase (Fragment) n=1 Tax=Nothoprocta ornata TaxID=83376 RepID=A0A7K7BJT6_9AVES)

HSP 1 Score: 344 bits (883), Expect = 1.550e-107
Identity = 214/475 (45.05%), Postives = 268/475 (56.42%), Query Frame = 1

Query:    4 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLSL 1428
            +VHERH   DFLLG+LR +L  R DLK++LMSATIN  LFS +F GAP+++VPGR +P+ V Y P   +                       GG+ +R   D RP++++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RWVVL LHS+LSV EQDKVFD  P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  +P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPPP +L  A+  L   GA D A                                                                                  LTP+G++L+ LPVD  VGK+L LGAL G +E  LT+AAALS Q+PF   A  +   A       SP G+ LTLL++
Sbjct:  156 EVHERHLHGDFLLGVLRRLLPARPDLKLILMSATINIGLFSSYFGGAPVLQVPGRSFPITVIYQPIPKEEAAP-------------------GGKTER--LDPRPFLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQPYAA--RTQRWVVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDVLVLQLKSMGLGDPRTFPFLEPPPPSSLETAVRYLREQGALDEA--------------------------------------------------------------------------------EELTPIGKLLAQLPVDVVVGKVLVLGALLGLAEPALTVAAALSVQSPFLRAAPGNPERATARRPLESPHGDPLTLLNV 526

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: S4R5D4_PETMA (DEAH (Asp-Glu-Ala-His) box polypeptide 34 n=5 Tax=Petromyzon marinus TaxID=7757 RepID=S4R5D4_PETMA)

HSP 1 Score: 352 bits (904), Expect = 1.960e-107
Identity = 210/476 (44.12%), Postives = 269/476 (56.51%), Query Frame = 1

Query:    4 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREY-VEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLSL 1428
            +VHERH  CD LLG+LR +L  R DL++VLMSATIN +LFSR+   AP+++VPGR+YP++V Y P   +                          GK    D RPY++++QSID   P DERGDLLVFLSGM D+  V+E  + Y VE K   RW+VL LHS+LS E+QDKVFD +P G RK I++TNIAETSVTIDGVRF+ DSGK KEMS+DP + + R LQEFW+SRASAEQRKGRAGRTGPG+CFRLYA   +D L P+A PE++R PL+ +VLQMKS+GL DPR F +L PPP  +L  +++ L   GA D                                                                                 +  LTP+GRVL+ LP+D   GKML +G + G  E VLT+AAA+S Q+PF   A  +   +       S  G+ LTLL++
Sbjct:  223 EVHERHLHCDLLLGVLRELLPLRDDLRLVLMSATINIQLFSRYLGDAPVLQVPGRLYPIQVIYRPVPEEEKT-----------------------GKSERIDPRPYLRIMQSIDHKYPADERGDLLVFLSGMADIARVAEAAQSYAVETK---RWIVLQLHSTLSAEQQDKVFDLAPEGVRKCIVSTNIAETSVTIDGVRFIVDSGKVKEMSYDPKAKMQR-LQEFWISRASAEQRKGRAGRTGPGVCFRLYAESEYDALEPYAVPEVQRVPLDSVVLQMKSMGLGDPRLFGFLEPPPASSLETSMQFLQEQGALD--------------------------------------------------------------------------------EQEELTPIGRVLATLPLDVLTGKMLLVGCVLGAVEPVLTIAAAMSVQSPFHRNAHTNPDCSRARRSLESDHGDPLTLLNV 591

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A452H9F6_9SAUR (DExH-box helicase 34 n=3 Tax=Gopherus agassizii TaxID=38772 RepID=A0A452H9F6_9SAUR)

HSP 1 Score: 346 bits (887), Expect = 5.490e-107
Identity = 213/474 (44.94%), Postives = 265/474 (55.91%), Query Frame = 1

Query:    4 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLS 1425
            +VHERH   DFLLG+LR +L  R DLK+VLMSATIN  LF+ +F GAP+++VPGR++P+ V Y P   +                          GK    D RPY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RWVVL LHS+LS+ EQDKVFD  P G RK I++TNIAETSVTIDGVRFV DSGK KE+S+DP + + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  AP+  PEI+R  L+ LVLQMKS+GL DPR FP+L PPP  +L  A+  L   GA D A                                                                                  LTP+G +L+ LPVD  +GKML LGALFG +  VLT+AAALS Q+PF     A+   A       SP G+ LTLL+
Sbjct:  290 EVHERHLHSDFLLGVLRRLLPSRPDLKLVLMSATINIRLFAGYFGGAPVVQVPGRLFPITVVYQPIPQEE---------------------AAASGKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAYAT--HTQRWVVLPLHSTLSLAEQDKVFDMPPSGVRKCIVSTNIAETSVTIDGVRFVLDSGKVKELSYDPQAKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIQRVALDALVLQMKSMGLGDPRTFPFLEPPPQSSLEMAVRYLREQGALDEA--------------------------------------------------------------------------------ESLTPIGSLLAQLPVDVVIGKMLVLGALFGLAGPVLTVAAALSVQSPFLRPVRANPDCATARRPLESPHGDPLTLLN 659

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: UPI0015D5EB47 (probable ATP-dependent RNA helicase DHX34 n=1 Tax=Cygnus atratus TaxID=8868 RepID=UPI0015D5EB47)

HSP 1 Score: 351 bits (901), Expect = 7.640e-107
Identity = 217/474 (45.78%), Postives = 266/474 (56.12%), Query Frame = 1

Query:    4 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLS 1425
            +VHERH   DFLLG+LR +L  R DLK+VLMSATIN  LFS +F GAP+++VPGR++P+ V Y P   +                     V    GK    D RPY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RW+VL LHS+LSV EQDKVFD  P G RK ILATNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D  +P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPP  +L  A+  L   GA D A                                                                                  LTP+G +L+ LPVD  VGKML LGALFG +E  LT+AAALS Q+PF   + A+   A       SP G+ LTLL+
Sbjct:  262 EVHERHLHGDFLLGVLRRLLPARPDLKLVLMSATINIRLFSDYFGGAPVLQVPGRIFPISVIYEPIPKEE--------------------VAAAAGKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVQEAAQVYAA--HTQRWIVLPLHSTLSVSEQDKVFDVPPPGVRKCILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQVKSMGLGDPRTFPFLEPPPAASLETAVRYLREQGALDEA--------------------------------------------------------------------------------EELTPIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRLSNANPDCATARRPLESPHGDPLTLLN 632

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BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Match: A0A8C3GJ77_CAIMO (DExH-box helicase 34 n=1 Tax=Cairina moschata domestica TaxID=1240228 RepID=A0A8C3GJ77_CAIMO)

HSP 1 Score: 350 bits (899), Expect = 1.390e-106
Identity = 217/474 (45.78%), Postives = 265/474 (55.91%), Query Frame = 1

Query:    4 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRTIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSHSGAXXXXXXXXTAGVAGLPVPPHLQTPPPLPPQQSFPQXXXXXXXXXXXXXXXXXXXXXXXATLDAFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPIAEFSSPDGERLTLLS 1425
            +VHERH   DFLLG+LR +L  R DLK+VLMSATIN  LFS +F GAP+++VPGR++P+ V Y P   +                     V    GK    D RPY+++LQ+ID   P +ERGDLLVFLSG+ ++ AV E  + Y      +RW+VL LHS+LSV EQDKVFD  P G RK ILATNIAETSVTIDGVRFV DSGK KEMS+DP   + R LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA   +D   P+  PEI+R  L+ LVLQ+KS+GL DPR FP+L PPP  +L  A+  L   GA D A                                                                                  LTP+G +L+ LPVD  VGKML LGALFG +E  LT+AAALS Q+PF   + A+   A       SP G+ LTLL+
Sbjct:  258 EVHERHLHGDFLLGVLRRLLPARPDLKLVLMSATINIRLFSDYFGGAPVLQVPGRIFPISVIYEPIPKEE--------------------VAAAAGKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVQEAAQVYAT--QTQRWIVLPLHSTLSVSEQDKVFDVPPPGVRKCILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQR-LQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFPPYPVPEIQRVALDALVLQVKSMGLGDPRTFPFLEPPPSASLETAVRYLRDQGALDEA--------------------------------------------------------------------------------EELTPIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRLSNANPDCATARRPLESPHGDPLTLLN 628

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot

BLAST of mRNA_L-digitata_M_contig10016.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LEZ4_ECTSI	4.650e-232	78.02	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K4A6_9PHAE	8.880e-184	65.77	Helicase ATP-binding domain-containing protein n=1...	[more]
A0A8J4K430_EUDMI	4.020e-108	45.26	Putative ATP-dependent RNA helicase DHX34 (Fragmen...	[more]
UPI001C67EC2F	5.020e-108	46.74	probable ATP-dependent RNA helicase DHX34 n=1 Tax=...	[more]
A0A7L0JZ23_CHATO	1.420e-107	45.99	DHX34 helicase (Fragment) n=2 Tax=Anseriformes Tax...	[more]
A0A7K7BJT6_9AVES	1.550e-107	45.05	DHX34 helicase (Fragment) n=1 Tax=Nothoprocta orna...	[more]
S4R5D4_PETMA	1.960e-107	44.12	DEAH (Asp-Glu-Ala-His) box polypeptide 34 n=5 Tax=...	[more]
A0A452H9F6_9SAUR	5.490e-107	44.94	DExH-box helicase 34 n=3 Tax=Gopherus agassizii Ta...	[more]
UPI0015D5EB47	7.640e-107	45.78	probable ATP-dependent RNA helicase DHX34 n=1 Tax=...	[more]
A0A8C3GJ77_CAIMO	1.390e-106	45.78	DExH-box helicase 34 n=1 Tax=Cairina moschata dome...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig10016	contig	L-digitata_M_contig10016:536..8198 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Seed ortholog	2880.D8LEZ4
Preferred name	DHX34
PFAMs	DEAD,HA2,Helicase_C,OB_NTP_bind
Model size	1431
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K20101
Hectar predicted targeting category	other localisation
GOs	GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0045934,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0061013,GO:0065007,GO:0070035,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902369,GO:1902373,GO:1903311,GO:1903312,GO:2000622,GO:2000623
Exons	7
Evalue	7.63e-233
EggNOG OGs	COG1643@1\|root,KOG0922@2759\|Eukaryota
EC	3.6.4.13
Description	helicase activity
Cds size	1431
COG category	L
BRITE	ko00000,ko01000,ko03019

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig10016.1.3	prot_L-digitata_M_contig10016.1.3	Laminaria digitata LdigPH10_18mv male	polypeptide	L-digitata_M_contig10016 536..8198 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682406604.0954196-CDS-L-digitata_M_contig10016:535..663	1682406604.0954196-CDS-L-digitata_M_contig10016:535..663	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10016 536..663 +
1682406604.1072998-CDS-L-digitata_M_contig10016:1730..1827	1682406604.1072998-CDS-L-digitata_M_contig10016:1730..1827	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10016 1731..1827 +
1682406604.1166449-CDS-L-digitata_M_contig10016:2918..3020	1682406604.1166449-CDS-L-digitata_M_contig10016:2918..3020	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10016 2919..3020 +
1682406604.1253202-CDS-L-digitata_M_contig10016:4823..5009	1682406604.1253202-CDS-L-digitata_M_contig10016:4823..5009	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10016 4824..5009 +
1682406604.1342227-CDS-L-digitata_M_contig10016:5783..5929	1682406604.1342227-CDS-L-digitata_M_contig10016:5783..5929	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10016 5784..5929 +
1682406604.143398-CDS-L-digitata_M_contig10016:7042..7421	1682406604.143398-CDS-L-digitata_M_contig10016:7042..7421	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10016 7043..7421 +
1682406604.1525328-CDS-L-digitata_M_contig10016:7805..8198	1682406604.1525328-CDS-L-digitata_M_contig10016:7805..8198	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10016 7806..8198 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-digitata_M_contig10016:536..8198+
coding sequence from alignment at L-digitata_M_contig10016:536..8198+

protein sequence of mRNA_L-digitata_M_contig10016.1.3

>prot_L-digitata_M_contig10016.1.3 ID=prot_L-digitata_M_contig10016.1.3|Name=mRNA_L-digitata_M_contig10016.1.3|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=477bp
MQVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPL
IRVPGRMYPVEVRYVPTSADNDIQEVVSRHDGEGQRKLRSRVGGGEGKRT
IFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEGK
SPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVR
FVADSGKAKEMSWDPTSGVSRSLQEFWVSRASAEQRKGRAGRTGPGLCFR
LYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPE
NLRAALEALALLGATDVAAVSFPSHSGAGAGAGAAATAGVAGLPVPPHLQ
TPPPLPPQQSFPQQPERQGSSHPPSSPQAAAAAAAAATLDAFDDATARAP
LTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARA
AASSSGANPIAEFSSPDGERLTLLSLH

mRNA from alignment at L-digitata_M_contig10016:536..8198+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-digitata_M_contig10016.1.3 ID=mRNA_L-digitata_M_contig10016.1.3|Name=mRNA_L-digitata_M_contig10016.1.3|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=7663bp|location=Sequence derived from alignment at L-digitata_M_contig10016:536..8198+ (Laminaria digitata LdigPH10_18mv male)
ATGCAGGTGCACGAGCGGCACGCGGGGTGCGATTTTTTGCTGGGATTGCT
GCGAGCCGTACTGAGGAGGAGGGCGGACCTGAAGGTCGTGCTCATGTCTG
CCACCATCAATCCCGAGCTATTTTCGAGGTAGGTTTGCTGTTGTTATTGT
TGTTGTTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGTTGGTGGTGGTG
TTGGTGTTGGTGTTGGTGTTGGTGGTGTAGGTGGTGTTGGTGGTGGTAGA
AGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTAGTGGTGGTGA
TGGCGGTGGTGATGGTGGTGGTAGTGGTGGTGTTGGTGTTGGTGTTGGTG
TTTTTGGTGTTGGTGTTGGTGTTGGTGTTGGTGGTGGTGATGTTGGCGGT
GGTGGTGTCGGTGTTGTCGCTATTGTTGTTTCTGTTTTTGTTTATGTTGT
TGTTGTTGTTGCTGTTGTCTTTGCTGCGGAGCTGTTGCTGCTGCTGTTGC
TGTTGTTTCTGCTAGAAGGCTCAGTGAAACACCGGGGGGGCATAGGGAGT
GCACCGGACCTTAACCTTGCAAATGCACCGCAACGAAACACCTGTATACC
TAGAAAAATAACGCCTGCATGGGATGAAACGCTACTGGTATCATCAAAGA
AACGAACGGATCGGAGCTAATTTTTCTGCTAAACATATAGTGTGTTGACC
TGCTTATCACTTTTCTTCATCCCTGCCGGGCACTTAGCGGTCTGTGCGTA
GCCCCTGACGGATATCGCGAAGTCGGATCGATCACCCCATATCTCGTCCC
TCGTTTGCGAAATAAATTAATTACAACCAACCCCGCCCAAAGTATATATA
CTGGTATATCATACGTATGTATTTAGGAGACGATATAGAACGACAGTCGA
GTGCGATACGATACACATATACATTAGTGGTCTGCTTTGTTTTCTGTTTG
TTTTTACGCTTCATTTTTTTTGTTTTTTTTTATGAACGAAGCATACAGAT
ACAGACAGCAGGCAGGGTTACGGGTTTCACGGGTACTAGGGGTGCACGGG
GATCCGAGTCCCTGACCCCCCACTACCCCCCCCCCCCCGCCGTTTTTATA
ATTTTCACAGCCCAAAACCAATCAAGGCCTCCCGTGTGCCTCCATACAAA
CGAAATCCTTGCGGCGACCGGGATCTGCTTCGTTCCTTTGATCAGGTTCT
TTGACGGCGCGCCACTCATCAGAGTGCCTGGTAGGATGTACCCGGTTGAA
GTGCGATACGTGCCTACATCGGCGGACAACGACATCCAGGAGGTACGAGT
AAACTATAGGAATAAGAAAGAGCCAAAATAAGAATAAGAACAAAAGGATC
AATTATTAGAGGGTCGTTAAGAAAATTCGATTAAGGAAAAATGCTCAGCG
GTGAGCGCTACACTAAAAAATCCACTATGATAGCCTGTGCTCAAGGTTGT
TCGAGGACGGTGCCACAATGTGGTTCTAAGGCTTTTTGCTCAGATTAGGT
GTTTCTTGCTGGCCGGCCCGTACTGTATGGTGGCGTGATACGTGCGGGAT
CAGACTTCCTCGTACCTACAGCAGTAGTGGCGTTTTCGCTCGTTCTGGCA
TCGCTCCAAACATGTGAAGTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGCTGTTGTTGGTGTCGTTGTTGCTGTTGTTGCTGTTGTCGTTGGAAG
GGGAGCTTTATTTGATGTGTAAGCGTTTGCGCGTGTTTCTTGAAGATTGC
GACCAGGGTGGGTAACAAGAGAGCTGCACGGAAAGCGGCAGCGTGAGAGA
GCAACAGCGCGAATCAATCAAACAAATGGACGAGTGGTGGGGAGTTCGTG
CTGACCCCACTCAATGACCACGACGACCCTTTTACTAGAGGAGCCGACGT
TTGTTTACCCGCACGTTCGATCTACCACGTAGCCATGTCAGGATGCTGCC
ATTAGGGTATTTGCGATTCACCCAGGTTGGAACCACTTTGGTTGGGTTTC
TTGTGGTCTGTTTCCTATACAAAAACGACCCCAACCCATGGAACGTTCCT
AAGAGTTAACCAAACCCGAGAATACTTAGCAAAAAGTGGCCAAAATGTCG
CTTCTAACCTAATTATTATTGGGTTGGACTAACTCTCAGGAAGGTTCCAT
GGGTTGGGGGCCATGATTATACAGGAAACAGACCACAAGAAACTCAACCA
AAGTGGTTCCAACTTGGGGTTAATCGCAAACACCCTATTGACGTAGACAG
GATGGTTGGAATGTGGTTCCTTGACGGATCTTAAAGTCGCTCGGGTATAC
CCAAATCCGCTCAACTGTTCAGAGAGGCTGGTCTGTCTTAGAGCATTAAC
AATCAACGTACGCTCGTCCACGTCTCCGAGCAGGTTGTCTCGAGGCATGA
CGGGGAAGGGCAGCGAAAGCTCAGGAGTCGGGTTGGCGGGGGCGAGGGGA
AGCGAACCATCTTCGACGCCCGCCCTTACGTGAAGGTCAGGAGGCGTGCC
GCGAGAGGGGTACAGTAGTGGGGTACCCGACTTAAGAGCCCCTCGGAGCA
GGCCAGTTTTACCGCTCGTATCTCCGTGCCGCTCTTATCTCAGATTGGGT
ATCATTTACTGGTAGGTTTTACTATAGGTGTCACAAGGCGTCACAACCGA
TTTAACCGCTCTTAACTCCGTATTCTCTTAACTCGGACGCTCTTGAATCG
GGTACCCCACTGTAGCATATTTCGGCCACATCTGGCTGACGGGGCTCCTC
GACTAAGGAACTGGTACCGAGTATCGTTGGCATTTAGTTTGTGTTTTTTG
CTATATTGTATCGTGACATAAACTAGATAACTGATTATTAATAGTTCATC
GGGTCAAGTTTGCCATTCTATCTCATACCAGTCTGACAATAAATATATGC
AACTTATTGGTTGTGTATTCTATGTTATTGTATATTATATTAAGGTTTCT
TGTATTTAATTGTCAGACTGGTAGCCAGTTTTTAGGGTGAGGTGAAATCT
CGTCAAGTCAGGAGAGCCTCAGAAAAACGTAGGTGCCCCTTGTACCTACG
ACTGGGGCTGGGGCTGGCTTCCAAACAGAGCGATCAAATTGAGAGAGCAA
TCCAAGCGAGCAAGTCGAGCGAGCAAACCGAGCGTGCAAAGCGAGTCGGT
AGAAGCTTTGGGATCGTTTGACACGTCGGACAGATCATGGTCCAGATCAA
CCATTGTAGATCCTAAACCTGCAGCTATGCGATGCTGTGCAGGATCTGTA
TTCGTGAGTGCAGATCCCACCCAGGAAAATATGTCCTGTATCATGCAGGT
GATACGGCTCCCACCCGGCGACACGAGCTAGATCGTACAGATCGGGAAAT
AGATCTATCTGCCCTGAAAGACCTACTGTAGACCATGAAGTAGGAGATCG
ATGATCTGTCCGTCCGAGGTGTGGAATCGTTTTAGACGATTTTTTTCTTC
GCGGACCTGTCCTTCTGTTGTTGTTGCTGCTGCTTGTTGTGGATTGTATT
GTACCATGTATAATAGTAGTTTGCACGAAACGCGCCCAAGGAGCTCTGAC
TGCTCAATCCCTTTAGAACTGGAACCCGTTTTTGTGGACGTATTACTTGG
AATTTGTATAGGGAGGCGTTTTCGGGCTCTAAAGGGGTTGACCCTGTTTA
CCACTGCATTGTACAGAAGCACGCATATGCCTCTATTTGTAAGTCATTTT
GTCCCTCAAACGGGACAACGCGATACTATTTCCTTAAAAGAGGGGCGCGA
ATGTTGCGCGGCTGCTTCGTCGCCATACCGGAAGCGGTCCTCTCGGCATT
TATTTTGGTTTTGGTGCTTGTTGCATATTTGCATTCTCAAGCCCCATTTG
TTTCCTGTTTCCTGTTTTCTGTTTTCTGTTTTCTGTCTTCTGTTCTGCTT
CGTTTTTGTTTGCTTCGTTTTTGTTTGCTTTGTTTTGTTTGCTTTGTTTT
GTTTGTTGGTTTTGTTTGTTTTGTTTTGTTTGTTTTGTTTGTTTGTCTTG
CCAGCTTTGTTTCAGAGCATTGACAACCTGTTCTCAGTTTTTTTTTTTGA
AAGAAGCATAACATCAGCCGTCGACGTATAGTCAATCAACTAGCTGAGGG
GTTCATTTCCGGATCGCTCGCAATAAAAAGACCACCATATTTCATGGCGG
GGATACCTAATAAAGCACGCCCATCTATACTCATCATTTCTCACCTATAT
TTATCTACTTGCTTGTACTCACCTGTATCTATCTACGACTATCTATGGCG
CGCAATTTTTTGTCTTTTCTCTCTGACCTTGCTTTCAGCTTCTGCAGAGC
ATCGACACCACTACCCCCCGCGACGAGAGGGGCGACCTTCTCGTGTTCCT
GTCCGGCATGGGCGACATGCTGGCCGTGTCGGAGGGAGTGCGCGAGTACG
TCGAGGGGAAGAGCCCGCGGCGCTGGGTGGTGCTGATGCTGCACTCCAGC
CTCTCCGTGGAGGAGCAAGACAAGGTAACGCTCAACGCTAGCGCGAACCA
AACGGGTGTGGGTCGGGTTGGGTTGGGTTGGGTTGGGTTGGGTTGGAATG
GGTTGGGTTGGGTTGGGTTTGGGGGGCGTCAGGTCGGGTCGGGTCGGGTC
TAGTCGGGTTTGAGGTGGTCGGGTTTGGGGGGATCGGGCTTGGAGAGGGG
CGACTCGGCTCAGCTCGGCTCGGCTCGGACTGGGTTGAGTTTGGGGAGGG
CTGGAAGGGTTCGCAGACTCTCGTGCTGCTTGTTCTGATAAAGCAGCGGG
GCACTTTCTTATCTTGACCCTGTTGGCGCAAGCCTTACACGCTCCTCGCC
GTTGCCCTTGACAGGGCAAGGTGGTTTTACGACGTGGGTAACAGCGTAAA
CCTTGTATGCGACGGTCCGCCTTTCTTCTCCACCCACCCCACCCCACCCC
ACCCCACCCCACCCCACCCCACCCCACCCCTCCCCACCCCCCGCCCCCCC
CACGAAAATCTGTCTGTCGAGCCGCACAACCGCGCTGGTTTTCAGTCAGC
CCCCCAGGTTGTCATTATCCTCACAGAAACACTGATGTGATCGCTCTGTA
CGCGCGCGATGCAACGACGAACGTAAAGTTACTGTTACGGGGGACCATAG
TAATCAGGACCAACGATTCACACCAAAAAACACAATTTCCCCTATTATGT
TTATTACCCGATTTGGTCCTGATTACTATGTTCTCCCGTAACACCAGGTA
CTGTACTGTTTACAAGTTTTTTATTTTGTGCCGTGTATGAAATACCAGGT
GTTCGACGCCTCCCCCCTGGGAACGCGCAAGATGATCCTGGCGACGAACA
TCGCGGAGACGAGCGTGACGATCGATGGGGTGCGGTTCGTGGCGGACAGC
GGGAAGGCGAAAGAGATGTCGTGGGATCCAACGTCGGGAGTGAGGTGAGG
TAGTACGAGCACCTATTTTTTTCTGAGCTTCACTTGAGGAGCTCCATATC
TCACCCAAAACTGACTTTGAGAAAAAATTGCACACATAGCCCGCCGAACA
ATCTCATGGCCTAGATGTAAACGAAACAATAGTGTAGCCAGGATTCGTCG
GAGTTCTATCCAGTGCATCTGCCTTTCCTTTGTTGAGTACTCTCATGATG
TTTGCGTCCAAAAATCAAGTGGTGTGCACTCTTTACGGCATTTACACACG
GCACTCATTTCGACCATAGGTTCAAGACTCGGGGGGTTTGTCGACAGATA
CATGCCGCGTAAGCGGCCACACCTTTTCCCGGAATGACTGCGAAACGTGG
AACCAAAAGTATTGTACGAGCAGCCTACCTCAAACACGAAATCGTGTGCT
GGTACGCATTACAACACACATGGGATACCGGGTAGTCCCTCCGTTCAGGC
GCTCCGTCAGTCATAAATGTTTTGACGAACAAGGGCTGCCCTTATCGTAG
CAAGCGTTCGCCGCCCTTATCGTAGGAAGCGTTCGCCGCTAATAGAGCTG
ATAGAGCTAATAGACACTCTGCTCGGAAATGTGAGGACCGTTGGGATATT
CACATGTATGCCCAAACGGTCCTTTAACTTCCAGATAGAGTCGCACAACT
AAGCGAATTGCTAATTTATACACGGCCTCCTAAAGCAACAACGGGCCCCC
TCTGAACTGGGTTAAGAGGACGACAAAGCACTTTTCCAAACGCCTTCCCC
CTTGACCCTCCGAATCTTCCCGAAAAACCGCAGAAACACAACAAGCCTCA
CACACCCAGAGCTTTCGGAATCCTATCCTCAAATTCCCTCAAAAACCTCA
AAAACCTGAGCATCCTTCGAACCCCCAGAAACTCCTCAGATTCCCCGGAA
CCCTCAGGAACCCCTGGAATATTCAGAAACCATATGACGTAAACCTTAAC
CCTTTTACTACTGCGCTGTGCAGAAACGTATATTTGACTCTAATTCCAAG
TACTTTGTCCCCAAACGGGAGTGGAGTGCGGTCACAAAGGGGTTAATTAA
TAATCTCCCGAACCCATATATAAACGGTACACGCGCGGCCGCAAAAACAA
AAACGAGCAGGTCCCTCCAAGAGTTCTGGGTGAGCCGCGCGTCCGCGGAG
CAGCGTAAGGGCAGGGCGGGCAGGACGGGGCCGGGGCTCTGCTTCCGGCT
GTACGCCCGCGGTACGTTCGACCGCCTCGCCCCCTTCGCCGAGCCGGAGA
TCCGCCGCTGCCCGCTGGAAGGCCTGGTATTACAGATGAAGAGCTTGGGC
CTGGAAGACCCGCGCTACTTCCCCTACTTGTCTCCGCCTCCTCCTGAGAA
TCTAAGGGCCGCTCTTGAGGCGCTCGCGCTTCTGGGCGCCACGGACGTGG
CTGCTGTTTCTTTTCCGTCGCATTCTGGTGCTGGTGCTGGTGCTGGTGCC
GCTGCTACCGCTGGTGTGGCTGGGTTGCCGGTGCCGGTGCCGGTGCCAAT
GCTCCCCTCGCGCTCGGTCGATGGAGATGGGGACACCGGTGGCGTGGGTT
CACGGACGACCGTGGGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGT
GGTGGCGGCGGTGGCGGTGGTGGTGGTTGCGGTGGTTGTGGTGGTGGCGG
TGGTGGTGGTGGCGGCGGCGGTGGCGGTGGTGGTGGTGGTAGTGGTGGTG
GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGACGGC
GGTGGCGGCGGGGGCGGAGGGGACGGGGGCGGTGGTGGAGGTGGGAGTGG
CGGCGGGGGCAGGGGCGGAAGCAGCTCCGACAGACTGCAGGAAGTATCGC
AACAGCCGCATCCGCCGCAGCCGCATCTGCAGACACCGCCACCGCTACCG
CCGCAGCAAAGCTTTCCGCAGCAGCCGGAACGGCAAGGTTCATCACACCC
ACCTTCGTCGCCTCAGGCGGCGGCGGCGGCGGCAGCGGCGGCGACCCTAG
ACGCCTTCGACGACGCCACCGCTCGCGCGCCGCTCACCCCGCTGGGACGA
GTGCTGTCGGCGCTGCCGGTGGACCCGTCGGTCGGGAAGATGCTGGCGCT
GGGAGCGCTGTTCGGCGAGAGCGAGCACGTGCTCACCCTGGCGGCCGCGC
TGAGCACGCAGACCCCGTTCGACGCGAGGGCGGCCGCGTCTTCCTCGGGC
GCTAACCCTATCGCGGAGTTTTCATCACCGGACGGTGAGCGCTTAACCCT
TTTATCACTGCAC

Coding sequence (CDS) from alignment at L-digitata_M_contig10016:536..8198+

>mRNA_L-digitata_M_contig10016.1.3 ID=mRNA_L-digitata_M_contig10016.1.3|Name=mRNA_L-digitata_M_contig10016.1.3|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=1431bp|location=Sequence derived from alignment at L-digitata_M_contig10016:536..8198+ (Laminaria digitata LdigPH10_18mv male)
ATGCAGGTGCACGAGCGGCACGCGGGGTGCGATTTTTTGCTGGGATTGCT
GCGAGCCGTACTGAGGAGGAGGGCGGACCTGAAGGTCGTGCTCATGTCTG
CCACCATCAATCCCGAGCTATTTTCGAGGTTCTTTGACGGCGCGCCACTC
ATCAGAGTGCCTGGTAGGATGTACCCGGTTGAAGTGCGATACGTGCCTAC
ATCGGCGGACAACGACATCCAGGAGGTTGTCTCGAGGCATGACGGGGAAG
GGCAGCGAAAGCTCAGGAGTCGGGTTGGCGGGGGCGAGGGGAAGCGAACC
ATCTTCGACGCCCGCCCTTACGTGAAGCTTCTGCAGAGCATCGACACCAC
TACCCCCCGCGACGAGAGGGGCGACCTTCTCGTGTTCCTGTCCGGCATGG
GCGACATGCTGGCCGTGTCGGAGGGAGTGCGCGAGTACGTCGAGGGGAAG
AGCCCGCGGCGCTGGGTGGTGCTGATGCTGCACTCCAGCCTCTCCGTGGA
GGAGCAAGACAAGGTGTTCGACGCCTCCCCCCTGGGAACGCGCAAGATGA
TCCTGGCGACGAACATCGCGGAGACGAGCGTGACGATCGATGGGGTGCGG
TTCGTGGCGGACAGCGGGAAGGCGAAAGAGATGTCGTGGGATCCAACGTC
GGGAGTGAGCAGGTCCCTCCAAGAGTTCTGGGTGAGCCGCGCGTCCGCGG
AGCAGCGTAAGGGCAGGGCGGGCAGGACGGGGCCGGGGCTCTGCTTCCGG
CTGTACGCCCGCGGTACGTTCGACCGCCTCGCCCCCTTCGCCGAGCCGGA
GATCCGCCGCTGCCCGCTGGAAGGCCTGGTATTACAGATGAAGAGCTTGG
GCCTGGAAGACCCGCGCTACTTCCCCTACTTGTCTCCGCCTCCTCCTGAG
AATCTAAGGGCCGCTCTTGAGGCGCTCGCGCTTCTGGGCGCCACGGACGT
GGCTGCTGTTTCTTTTCCGTCGCATTCTGGTGCTGGTGCTGGTGCTGGTG
CCGCTGCTACCGCTGGTGTGGCTGGGTTGCCGGTGCCGCCGCATCTGCAG
ACACCGCCACCGCTACCGCCGCAGCAAAGCTTTCCGCAGCAGCCGGAACG
GCAAGGTTCATCACACCCACCTTCGTCGCCTCAGGCGGCGGCGGCGGCGG
CAGCGGCGGCGACCCTAGACGCCTTCGACGACGCCACCGCTCGCGCGCCG
CTCACCCCGCTGGGACGAGTGCTGTCGGCGCTGCCGGTGGACCCGTCGGT
CGGGAAGATGCTGGCGCTGGGAGCGCTGTTCGGCGAGAGCGAGCACGTGC
TCACCCTGGCGGCCGCGCTGAGCACGCAGACCCCGTTCGACGCGAGGGCG
GCCGCGTCTTCCTCGGGCGCTAACCCTATCGCGGAGTTTTCATCACCGGA
CGGTGAGCGCTTAACCCTTTTATCACTGCAC