mRNA_L-digitata_M_contig1020.4.2 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-digitata_M_contig1020.4.2
Unique Name	mRNA_L-digitata_M_contig1020.4.2
Type	mRNA
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))

Homology

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BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot
Match: D7FTY3_ECTSI (S5 DRBM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY3_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 4.720e-144
Identity = 220/260 (84.62%), Postives = 238/260 (91.54%), Query Frame = 1

Query:    1 ADLIMSGTRYKDAVKGTDFDDLDEETAQEFEESVRRLTALRENRLEEYLENIGETDLLAQIQATKGEPQTSKDAGLPAPPRKKR--TVEMAQGKWAEILVHTDR---TVKGGMEIQYRALVTVGNLNGVGGFAIGKAISPAEAITEASRKAKLLPNLVYVERYKQASLCQDLVGKHNGSKVYIWSRSPGSGMRAGKLSRDILYNMGITDGACKMIGRRNKYSMIYAFFDALAKHQGIESIARGRGKRILSLQREMAGRFA 765
            ADLIMSGT Y++AVKGT+FD LD+ET++EFEES RRLTALRENRLEEYLE  GETDLL +++A  GEP+TS+    PAPP+KK+  TVEMAQG+WAEILVHTDR   TVKGGMEIQYRALVTVGNL+GVGGFAIGKA +PA AITEASRKAKLL NLVYVERYKQASLCQDLVGKHNGSKVYIWSR PGSGMRAGKLSRDILYNMGITDGACK+IGRRNKYSMIYA FDALAKH+GIESIARGRGKRILSLQREMAGRFA
Sbjct:  111 ADLIMSGTSYEEAVKGTEFDALDKETSKEFEESTRRLTALRENRLEEYLEETGETDLLDKVRAIYGEPETSEQTDGPAPPKKKKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKRILSLQREMAGRFA 370

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BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot
Match: D7FTY0_ECTSI (S5 DRBM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTY0_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 9.280e-140
Identity = 214/258 (82.95%), Postives = 232/258 (89.92%), Query Frame = 1

Query:    1 ADLIMSGTRYKDAVKGTDFDDLDEETAQEFEESVRRLTALRENRLEEYLENIGETDLLAQIQATKGEPQTSKDAGLPAPPRKKRTVEMAQGKWAEILVHTDR---TVKGGMEIQYRALVTVGNLNGVGGFAIGKAISPAEAITEASRKAKLLPNLVYVERYKQASLCQDLVGKHNGSKVYIWSRSPGSGMRAGKLSRDILYNMGITDGACKMIGRRNKYSMIYAFFDALAKHQGIESIARGRGKRILSLQREMAGRFA 765
            ADLIMSGT Y++AVKGT+FD LD+ET++EFEES RRLTALRENRLEEYLE  GETDLL +++A  GEP+TS+    PAPP+KK+TVEMAQG+WAEILVHTDR   TVKGGMEIQYRALVTVGNL+GVGGFAIGKA +PA AITEASRKAKLL NLVYVERYKQASLCQDLVGKHNGSKVYIWSR       AGKLSRDILYNMGITDGACK+IGRRNKYSMIYA FDALAKH+GIESIARGRGKRILSLQREMAGRFA
Sbjct:   52 ADLIMSGTSYEEAVKGTEFDALDKETSKEFEESTRRLTALRENRLEEYLEETGETDLLDKVRAIYGEPETSEQTDGPAPPKKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSR-------AGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKRILSLQREMAGRFA 302

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BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot
Match: A0A6H5LA05_9PHAE (S5 DRBM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA05_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 5.400e-68
Identity = 112/122 (91.80%), Postives = 115/122 (94.26%), Query Frame = 1

Query:  262 MAQGKWAEILVHTDR---TVKGGMEIQYRALVTVGNLNGVGGFAIGKAISPAEAITEASRKAKLLPNLVYVERYKQASLCQDLVGKHNGSKVYIWSRSPGSGMRAGKLSRDILYNMGITDGA 618
            MAQG+WAEILVHTDR   TVKGGMEIQYRALVTVGNL+GVGGFAIGKA +PA AITEASRKAKLL NLVYVERYKQASLCQDLVGKHNGSKVYIWSR PGSGMRAGKLSRDILYNMGITDGA
Sbjct:    1 MAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGA 122

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BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot
Match: A0A1Z5K7E2_FISSO (Small subunit ribosomal protein S5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7E2_FISSO)

HSP 1 Score: 137 bits (344), Expect = 2.170e-34
Identity = 80/167 (47.90%), Postives = 101/167 (60.48%), Query Frame = 1

Query:  259 EMAQGKWAEILVHTDRTVK---GGMEIQYRALVTVGNLNGVGGFAIGKAISPAEAITEASRKAKLLPNLVYVERYKQASLCQDLVGKHNGSKVYIWSRSPGSGMRAGKLSRDILYNMGITDGACKMIGRRNKYSMIYAFFDALAKHQGIESIARGRGKRILSLQREM 750
            ++A G+W+E+LV  DRT K   GG    YRALV  GNLNG GGF IGK+  P  A+  ASRK K   N+ +V+RY+   L  DL GK N  KVY+  RS   G+R   L R+IL   GIT+   K  G RN Y++  A F AL  H+ IE IA  RGKR++S+ R M
Sbjct:  234 QLAHGEWSEMLVTVDRTTKLWRGGRLESYRALVIGGNLNGCGGFGIGKSKDPINAVAVASRKCKR--NIFFVDRYQGNGLTSDLAGKQNSCKVYL--RSTDDGLRGNHLIREILKRFGITNCVAKSHGNRNPYNVTRATFKALMTHESIEDIALKRGKRLVSIDRAM 396

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BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot
Match: A0A7S3UU99_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU99_HETAK)

HSP 1 Score: 129 bits (324), Expect = 1.660e-33
Identity = 73/175 (41.71%), Postives = 108/175 (61.71%), Query Frame = 1

Query:  244 KKRTVEM--AQGKWAEILVHTDRT---VKGGMEIQYRALVTVGNLNGVGGFAIGKAISPAEAITEASRKAKLLPNLVYVERYKQASLCQDLVGKHNGSKVYIWSRSPGSGMRAGKLSRDILYNMGITDGACKMIGRRNKYSMIYAFFDALAKHQGIESIARGRGKRILSLQREMA 753
            K++ VE+   +G WA  +V  D T   VKGG     RA+V +GNL G  G+ +GKA    +A+  A R A    NL+YV+R+    L QD  GKHN   V + +  PG+G+ AG L R +L + G+ D + K +GRRN ++++ A F AL +H+G+E+IAR RGKRI+S+++  A
Sbjct:   17 KEQKVEIPGTEGPWAVTIVKEDSTTKVVKGGYLSTNRAVVVIGNLKGAVGYGMGKAAENRDAVDRAIRAASR--NLIYVDRFLDGGLAQDCAGKHNTCLVKLRAVRPGAGLSAGPLIRTVLQSAGVADASGKAVGRRNVFAVLRATFRALERHEGVEAIARKRGKRIVSMEKARA 189

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BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot
Match: A0A4D9DA75_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA75_9STRA)

HSP 1 Score: 136 bits (343), Expect = 7.230e-33
Identity = 68/162 (41.98%), Postives = 105/162 (64.81%), Query Frame = 1

Query:  268 QGKWAEILVHTDRT---VKGGMEIQYRALVTVGNLNGVGGFAIGKAISPAEAITEASRKAKLLPNLVYVERYKQASLCQDLVGKHNGSKVYIWSRSPGSGMRAGKLSRDILYNMGITDGACKMIGRRNKYSMIYAFFDALAKHQGIESIARGRGKRILSLQR 744
            +GKW ++LV TD T   +KGG  + YRALV VGNL G GG+ +GK  +  EA   A R AK   NL++++ Y+   +  DL GKHN  ++YI +  P    + G++  D+L  MG+  G  + IGRRN YS++ A F A++KH+G+E+++R RG+R++S+ +
Sbjct:  730 EGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAK--KNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSK 889

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BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot
Match: W7U5Y7_9STRA (30s ribosomal protein s5 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 7.290e-33
Identity = 68/162 (41.98%), Postives = 105/162 (64.81%), Query Frame = 1

Query:  268 QGKWAEILVHTDRT---VKGGMEIQYRALVTVGNLNGVGGFAIGKAISPAEAITEASRKAKLLPNLVYVERYKQASLCQDLVGKHNGSKVYIWSRSPGSGMRAGKLSRDILYNMGITDGACKMIGRRNKYSMIYAFFDALAKHQGIESIARGRGKRILSLQR 744
            +GKW ++LV TD T   +KGG  + YRALV VGNL G GG+ +GK  +  EA   A R AK   NL++++ Y+   +  DL GKHN  ++YI +  P    + G++  D+L  MG+  G  + IGRRN YS++ A F A++KH+G+E+++R RG+R++S+ +
Sbjct:  751 EGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAK--KNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSK 910

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BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot
Match: A0A1E7EQX8_9STRA (30S ribosomal protein S5 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQX8_9STRA)

HSP 1 Score: 106 bits (264), Expect = 5.390e-25
Identity = 61/156 (39.10%), Postives = 93/156 (59.62%), Query Frame = 1

Query:  286 ILVHTDRTVK---GGMEIQYRALVTVGNLNGVGGFAIGKAISPAEAITEASRKAKLLPNLVYVERYKQASLCQDLVGKHNGSKVYIWSRSPGSGMRAGKLSRDILYNMGITDGACKMIGRRNKYSMIYAFFDALAKHQGIESIARGRGKRILSLQR 744
            +L+ TDR  K   GG  + +RALV  GN  G GGF +GKA  P +A+  A R AK   N+ +V+R++  ++ +DLVG+ N  KV +  R   +G+R   L  +IL   GIT+   K  G RN Y+++ A F AL  H+ ++ IA  RG R+++L++
Sbjct:    1 MLIRTDRVSKMWRGGRVVSFRALVIGGNTKGCGGFGLGKAFEPEDAVEIACRMAKR--NIFFVDRFRNMTITRDLVGRQNSCKVQL--RVTNNGLRGNPLCCEILKLFGITNVVAKAHGSRNHYNVVRATFKALLTHESLDDIAMKRGIRLVNLEK 152

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BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot
Match: D7FIU8_ECTSI (Ribosomal_S5_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU8_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 5.630e-22
Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 1

Query:  619 CKMIGRRNKYSMIYAFFDALAKHQGIESIARGRGKRILSLQREMAGRFA 765
            CK+IGRRNKYSMIYA FDALAKH+GIESIARGRGKRILSLQREMAGRFA
Sbjct:    3 CKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKRILSLQREMAGRFA 51

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BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot
Match: A0A420WMI4_9PROT (30S ribosomal protein S5 n=4 Tax=Robiginitomaculaceae TaxID=2800062 RepID=A0A420WMI4_9PROT)

HSP 1 Score: 92.0 bits (227), Expect = 3.240e-19
Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = 1

Query:  241 RKKRTVEMAQGKWAEILVHTDR---TVKGGMEIQYRALVTVGNLNGVGGFAIGKAISPAEAITEASRKAKLLPNLVYVERYKQASLCQDLVGKHNGSKVYIWSRSPGSGMRAGKLSRDILYNMGITDGACKMIGRRNKYSMIYAFFDALAKHQGIESIARGRGKRILSL 738
            R+ +  E    ++ + LVH +R   TVKGG  + + ALV VG+  G  GF  GKA    EAI +A+ +AK    ++ V   +  +L  D+ G+H   K+ + S  PG+G+ AG   R +L  +G+ D   K +G  N Y+M+ A FDAL + +    IA  RGK++  +
Sbjct:    7 RRNKRDEEQDNEFIDRLVHINRVAKTVKGGRNMSFAALVIVGDEKGRVGFGKGKAREVPEAIRKATEEAK--KTMIRVPLREGRTLHHDVRGRHGAGKIVMRSAPPGTGVIAGGPMRAVLECLGVQDVVGKSVGTSNPYNMVRATFDALKRMESPRMIANKRGKKVAEI 173

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot

BLAST of mRNA_L-digitata_M_contig1020.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FTY3_ECTSI	4.720e-144	84.62	S5 DRBM domain-containing protein n=1 Tax=Ectocarp...	[more]
D7FTY0_ECTSI	9.280e-140	82.95	S5 DRBM domain-containing protein n=2 Tax=Ectocarp...	[more]
A0A6H5LA05_9PHAE	5.400e-68	91.80	S5 DRBM domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A1Z5K7E2_FISSO	2.170e-34	47.90	Small subunit ribosomal protein S5 n=2 Tax=Fistuli...	[more]
A0A7S3UU99_HETAK	1.660e-33	41.71	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A4D9DA75_9STRA	7.230e-33	41.98	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
W7U5Y7_9STRA	7.290e-33	41.98	30s ribosomal protein s5 n=1 Tax=Nannochloropsis g...	[more]
A0A1E7EQX8_9STRA	5.390e-25	39.10	30S ribosomal protein S5 n=1 Tax=Fragilariopsis cy...	[more]
D7FIU8_ECTSI	5.630e-22	93.88	Ribosomal_S5_C domain-containing protein n=1 Tax=E...	[more]
A0A420WMI4_9PROT	3.240e-19	34.91	30S ribosomal protein S5 n=4 Tax=Robiginitomaculac...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig1020	contig	L-digitata_M_contig1020:7964..11457 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FTY3
Preferred name	MRPS5
PFAMs	Ribosomal_S5,Ribosomal_S5_C
Model size	768
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K02988,ko:K14026
KEGG Pathway	ko03010,ko04141,map03010,map04141
KEGG Module	M00178,M00179,M00403
Hectar predicted targeting category	other localisation
GOs	GO:0000313,GO:0000314,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005761,GO:0005763,GO:0005840,GO:0006412,GO:0006414,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0019866,GO:0022411,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032543,GO:0032984,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0070125,GO:0070126,GO:0071704,GO:0071840,GO:0098798,GO:0140053,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons	7
Evalue	1.79e-142
EggNOG OGs	COG0098@1\|root,KOG2646@2759\|Eukaryota
Description	structural constituent of ribosome
Cds size	756
COG category	J
BRITE	br01610,ko00000,ko00001,ko00002,ko03011

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig1020.4.2	prot_L-digitata_M_contig1020.4.2	Laminaria digitata LdigPH10_18mv male	polypeptide	L-digitata_M_contig1020 7976..11457 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682406624.8677607-UTR-L-digitata_M_contig1020:7963..7975	1682406624.8677607-UTR-L-digitata_M_contig1020:7963..7975	Laminaria digitata LdigPH10_18mv male	UTR	L-digitata_M_contig1020 7964..7975 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682406624.8770025-CDS-L-digitata_M_contig1020:7975..8121	1682406624.8770025-CDS-L-digitata_M_contig1020:7975..8121	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig1020 7976..8121 +
1682406624.8843508-CDS-L-digitata_M_contig1020:8449..8510	1682406624.8843508-CDS-L-digitata_M_contig1020:8449..8510	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig1020 8450..8510 +
1682406624.892023-CDS-L-digitata_M_contig1020:8959..9046	1682406624.892023-CDS-L-digitata_M_contig1020:8959..9046	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig1020 8960..9046 +
1682406624.8993995-CDS-L-digitata_M_contig1020:9512..9637	1682406624.8993995-CDS-L-digitata_M_contig1020:9512..9637	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig1020 9513..9637 +
1682406624.906667-CDS-L-digitata_M_contig1020:10103..10197	1682406624.906667-CDS-L-digitata_M_contig1020:10103..10197	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig1020 10104..10197 +
1682406624.914022-CDS-L-digitata_M_contig1020:10828..10921	1682406624.914022-CDS-L-digitata_M_contig1020:10828..10921	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig1020 10829..10921 +
1682406624.921313-CDS-L-digitata_M_contig1020:11307..11457	1682406624.921313-CDS-L-digitata_M_contig1020:11307..11457	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig1020 11308..11457 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-digitata_M_contig1020:7964..11457+
coding sequence from alignment at L-digitata_M_contig1020:7964..11457+

protein sequence of mRNA_L-digitata_M_contig1020.4.2

>prot_L-digitata_M_contig1020.4.2 ID=prot_L-digitata_M_contig1020.4.2|Name=mRNA_L-digitata_M_contig1020.4.2|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=252bp
MSGTRYKDAVKGTDFDDLDEETAQEFEESVRRLTALRENRLEEYLENIGE
TDLLAQIQATKGEPQTSKDAGLPAPPRKKRTVEMAQGKWAEILVHTDRTV
KGGMEIQYRALVTVGNLNGVGGFAIGKAISPAEAITEASRKAKLLPNLVY
VERYKQASLCQDLVGKHNGSKVYIWSRSPGSGMRAGKLSRDILYNMGITD
GACKMIGRRNKYSMIYAFFDALAKHQGIESIARGRGKRILSLQREMAGRF
A*

mRNA from alignment at L-digitata_M_contig1020:7964..11457+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-digitata_M_contig1020.4.2 ID=mRNA_L-digitata_M_contig1020.4.2|Name=mRNA_L-digitata_M_contig1020.4.2|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=3494bp|location=Sequence derived from alignment at L-digitata_M_contig1020:7964..11457+ (Laminaria digitata LdigPH10_18mv male)
GCGGACTTGATAATGTCGGGAACAAGGTATAAGGATGCCGTCAAGGGAAC
AGATTTTGACGATTTGGACGAGGAAACAGCACAGGAGTTCGAGGAGTCAG
TCAGGCGTTTAACGGCACTGCGAGAGAACCGTCTCGAGGAGTACTTGGAG
AACATTGGGTGAGCGCAGTGCAGCGGAATAGAGTAGAGTAGAAAAGAGAA
GGGAGTTAGTGGGTATTTTGGGGTTGCGTGGCATGACATGAACCTGACAT
AAACATGACATAAACATGATACATGCGAGACTGGACACCTCCTGTCAACC
CTTCCGGATGAGATTCGAACAATGTGTACCGACAGTAAACCCCAAAGCAA
CTGCAAAATTAGAGAAATGTAGCGCTGGATGCAGGCTACACACCTTAAGG
ATTCAGTACCAGGTAGGTTTTAATCCCTTGGTCATAGCAATCGAACTAAT
GAATGCCAACCGCTTCTGTTGTTGTGAATTTATCAGTGAAACGGATCTTC
TTGCTCAAATACAGGCCACGAAGGGCGAGCCCCAGACCTCCAAAGATGTG
AGCCCCAGATGTGTACCGTGTCGGGGGTTCGATGCGTCACCCTGTTTTTT
ACACGACACATGGAACAACCTGGTACATGAGACGTCATCACCTTTTGATT
TTTGTCGACCGCGCCGCTGATTTTTGCCTGAAATTGATCAGTCTGCAGAG
GACGTAGCTTCAGCTTTTATAACTAGGGTTCATGGCATATCTCTACCAGT
TGCTTTCTTGAACTGCTGTACCCTAGAGCTCTATTGAAAAGGGAATAGCC
CCTGTAATTCACCTTTGTTCTTCACAACGCTTTTCGATGACCATTTTGAT
GTATGCATATCACATGCGCTCGACGCCTATGTACCGTGTTTTCTTTTTGT
GTGAAGACATCTTGATGGACAACCTGTCATGGCATCATGCCATCATGTAC
CGAAATGCCCCTCCCGACCCCCAACGTTACCTCACAACTGCCGCAGGCGG
GGCTTCCTGCACCCCCCAGGAAGAAACGAACGGTCGAAATGGCGCAAGGC
AAATGGGCCGAAATTTTAGTACACACCGACCGAGTCACTAAGGCAAGAAA
GGAATCACGACATACTTTGCTGCTTCCTGGTAGTGCTTTGTTTAGTTGTC
TGTTAATAGTTATTTTAGGTAACGTGAAACAGCACCGAAGCGCTATTCGT
ATACTTCGGTATACGTCGAAGTACAAGTACTGGGGCATTTGGGCTCTAAA
TCGATGGGAACGCCAACGCTGACTCAGTTCGCGCGTACGTTTTGCCACAT
TGTTTTAAAGTTCGATTTACACCGGGCCTGAATATCTTGTTACGCACAAC
CTTTGGCACCCTATCAAACGTCAAAAGGGTCATGGCGCACCGCTAGCTCA
TCCAAGTTTTCCCGAACCTCCAGTGCCCTTTTGCGTGGTTGATTGCTCTA
TTGCTTCCCATTGCCGGAGCTGGGAGCACGAACACTTTGAAGTAAGGCAG
GACTATGATAAAGTTTGTTAATTTGTCTCTCCTGTTGCACCTCCCTCAGA
CCGTGAAGGGTGGAATGGAGATCCAGTACAGGGCGCTGGTGACTGTGGGC
AATCTGAACGGCGTTGGAGGGTTCGCTATTGGGAAAGCAATCAGCCCTGC
CGAGGCCATCACGGAAGCCAGCCGGTAAGGCCATACTTGGTACGTATTTC
TACCTGCTATTTCACCTGTTGACATTTGATATTTGACAAATCATATGAGA
CCGCTGGACTATGTGGACGTTGAAGTCTGGGGGCAGGATCTGTTTCTATC
CAAGTACGTCAGATACTCTGCTGACGTTTTTGGGAGGTTGACGCCAGCCA
TTGCGGCGATCATGAACACTTTTGTGGTATCGTAAGGGCTCGTCAACGAA
AAAATTGTCGTATCGTCTGCTTTCGTGTGAGACTAAGACGAGCATGCATG
CCTTGAGTTAAACGTGCCTCGTGCCACGCTGATTGGACCCTCTTCTTTAT
TTTACGGTAATTTGTGCAATGGCTTTCACCATCTTGATTTTGTGCGTGTT
TTGTTACGTTTGCTAATGCTGTTTTGCTGTTGTTTGCCGTTTTCGTGCAT
ACCGCGTGCCACTTGCCGATATGTATATATATTTTCTCAGAAAAGCAAAG
TTGCTGCCCAACCTTGTGTACGTGGAGCGATACAAGCAGGCGTCTCTTTG
CCAAGACCTGGTGGGAAAACACAACGGGAGCAAGGTGTGTCACCCTATTA
ATAGGGAAATGTTGCTATACTTCGTACAATAATGTTGAAGTGCTATTGCA
GACAGAAAGCCAGTCATGCCGCAATCAACGAAGTGCGTCGACCTGATAGG
ACTGACGAAAGGATTGTCAATAGTTCGCCGCCAGTAGGGTTGCGAGTGAA
TGTTTGGCTCTTCAAACATCACCGCCGCTTTGTGCTGTACTGCAACATAC
CTGATATTGCTCTACAGAGTGCTATTTTCCCTTTTGAGGCCCAGGCATAA
GCAATCTACTTAAGGGCAATCTACTTAAGGACAATCTACTTGAGGACAAT
CTACTTAAGGAAGCGACAAAGGTGTTATCATCCCCCTTTAGAACTATCAA
TAGTCAATAAAGTATCAACGTGCTGCGCTCGTATGACACTACTCCCTCCG
TTGCACTTCGGACGCATCCCCTACCACAGCAGCATTGATTGACTGAATGG
TTCCCAAAGGGTTAATTAGGTATGGTAGTAAGGTAGGTATCTACGTACCG
ACCTGGTACTACAGTAAATTAGATTATGCACGCTACTCGTATGGTGTTAT
GATGCCTCATCGCTGTTAACGGAACGGTGTCTGTCATTGATGCTATCATT
GATGGTGTTTGCTAGGTGTACATCTGGTCTAGGTCACCAGGATCTGGCAT
GCGAGCGGGCAAGCTGTCGCGGGATATTCTGTACAACATGGGCATCACCG
ACGGCGCGGTAAGGAAGTTATTACTAATTATACTGTTAATACTATTAATA
CGAGATTACAGAACTGCTCGTCATGGACGGTGACAGTGTTTAATACTATT
ATAATGTTCATACGAAGTAGTGGTACTACGGGAGCAGACTTATGCTATCA
TACCTGGTCGCCATGTGACCCTTCGGTGGTGGCTATACGTCAAATCGTAC
CGGCATAAAATACACGGTATAAAAAAGAGCTGTGGTCCACAGGATACCGC
TTAGAGTCCCTGCCTTGTACTGCCATTGCTGTAATTCGTCGCGCTCGGGA
CGTGAACTCCCAACTCTTGTGCCATATGTGTCTCTCTTATGCCATACCTG
GTATCATTTGTACCCCCCTTGTGCCATCTGTGCCGAATGTTCAGTGCAAG
ATGATCGGGAGGCGCAACAAATACTCGATGATCTACGCCTTCTTCGACGC
CCTCGCCAAGCATCAAGGAATCGAGAGCATCGCACGAGGCCGAGGGAAAC
GGATTTTGTCTCTCCAAAGAGAGATGGCGGGACGGTTTGCCTAG

Coding sequence (CDS) from alignment at L-digitata_M_contig1020:7964..11457+

>mRNA_L-digitata_M_contig1020.4.2 ID=mRNA_L-digitata_M_contig1020.4.2|Name=mRNA_L-digitata_M_contig1020.4.2|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=756bp|location=Sequence derived from alignment at L-digitata_M_contig1020:7964..11457+ (Laminaria digitata LdigPH10_18mv male)
ATGTCGGGAACAAGGTATAAGGATGCCGTCAAGGGAACAGATTTTGACGA
TTTGGACGAGGAAACAGCACAGGAGTTCGAGGAGTCAGTCAGGCGTTTAA
CGGCACTGCGAGAGAACCGTCTCGAGGAGTACTTGGAGAACATTGGTGAA
ACGGATCTTCTTGCTCAAATACAGGCCACGAAGGGCGAGCCCCAGACCTC
CAAAGATGCGGGGCTTCCTGCACCCCCCAGGAAGAAACGAACGGTCGAAA
TGGCGCAAGGCAAATGGGCCGAAATTTTAGTACACACCGACCGAACCGTG
AAGGGTGGAATGGAGATCCAGTACAGGGCGCTGGTGACTGTGGGCAATCT
GAACGGCGTTGGAGGGTTCGCTATTGGGAAAGCAATCAGCCCTGCCGAGG
CCATCACGGAAGCCAGCCGAAAAGCAAAGTTGCTGCCCAACCTTGTGTAC
GTGGAGCGATACAAGCAGGCGTCTCTTTGCCAAGACCTGGTGGGAAAACA
CAACGGGAGCAAGGTGTACATCTGGTCTAGGTCACCAGGATCTGGCATGC
GAGCGGGCAAGCTGTCGCGGGATATTCTGTACAACATGGGCATCACCGAC
GGCGCGTGCAAGATGATCGGGAGGCGCAACAAATACTCGATGATCTACGC
CTTCTTCGACGCCCTCGCCAAGCATCAAGGAATCGAGAGCATCGCACGAG
GCCGAGGGAAACGGATTTTGTCTCTCCAAAGAGAGATGGCGGGACGGTTT
GCCTAG