mRNA_L-digitata_M_contig10193.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig10193.1.1 vs. uniprot
Match: D7FRP4_ECTSI (Similar to Iron-containing Alcohol Dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP4_ECTSI) HSP 1 Score: 238 bits (608), Expect = 3.120e-71 Identity = 123/149 (82.55%), Postives = 131/149 (87.92%), Query Frame = 3
Query: 354 DLESLSNPGKDRDYGSERALQYGVS----GVAAGASDHFFSADTRVVFGVNALEIGLVELYDTGLQRALIVTGWNQARADPVVWELLPRGFDLAWHSVSAEPSLTDVAEGAALALEHRADCVVAMGGAAVIDAAKAIAAIAYADKDHNK 788
DLESL+NP K++DYG ALQYGV+ AGA+ HFFSADTRVVFGVNALEIGLVELYD GLQRA+IVTGWNQARADPVVWELLPRGFDL WHSVS+EPSL+DVAEGA LALEHRADCVVAMGGAAVIDA KAIAAIAYADKD K
Sbjct: 51 DLESLANPAKEKDYGDNSALQYGVTVGAEAAGAGAAHHFFSADTRVVFGVNALEIGLVELYDLGLQRAMIVTGWNQARADPVVWELLPRGFDLKWHSVSSEPSLSDVAEGAKLALEHRADCVVAMGGAAVIDAGKAIAAIAYADKDSAK 199
BLAST of mRNA_L-digitata_M_contig10193.1.1 vs. uniprot
Match: A0A7S1XY77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XY77_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 8.560e-13 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 3
Query: 459 FSADTRVVFGVNALEIGLVELYDTGLQRALIVTGWNQARADPVVWELLPRGFDLAWHSVSAEPSLTDVAE--GAALALEHRADCVVAMGGAA 728
F+ T+V FG+NALE+ ++E G Q L++TG+N ARAD V+WE PRG L +V AEPS T+VAE A ++E D +V+ GG A
Sbjct: 17 FATRTKVFFGLNALEVAMIEARALGDQM-LLLTGFNAARADAVIWETEPRGMKLHAINVIAEPSATEVAEIAEAVRSMEPPPDVIVSAGGGA 107
BLAST of mRNA_L-digitata_M_contig10193.1.1 vs. uniprot
Match: A0A2N9JIV2_9ACTN (Fe-ADH domain-containing protein n=2 Tax=Micropruina glycogenica TaxID=75385 RepID=A0A2N9JIV2_9ACTN) HSP 1 Score: 61.6 bits (148), Expect = 2.770e-7 Identity = 46/105 (43.81%), Postives = 60/105 (57.14%), Query Frame = 3
Query: 459 FSADTRVVFGVN-ALEI-GLVELYDTGLQRALIVTGWNQARADPVVWELLPRGF-DLAWHSVSAEPSLTDVAEGAALALEHRADCVVAMGGAAVIDAAKAIAAIA 764
F+ R+VFG A E+ L+ + T R + TG ADP + L G DLAW SV EP+L D+ G A A +H AD +V +GG AV+DAAK IAA+A
Sbjct: 18 FATAHRIVFGAGRAAELPALIGEFGT---RPFVCTG-----ADPTRFSGLLTGVADLAWWSVGGEPALDDIRAGVAAARDHGADVLVGLGGGAVLDAAKLIAALA 114
BLAST of mRNA_L-digitata_M_contig10193.1.1 vs. uniprot
Match: A0A7S0ZFT0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFT0_9RHOD) HSP 1 Score: 62.0 bits (149), Expect = 2.810e-7 Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 3
Query: 444 ASDHFFSADTRVVFGVNALEIGLVELYDTGLQRALIVTGWNQARADPVVWELLPR----------GFDLAWHSVSA-EPSLTDVAEGAALALEHRADCVVAMGGAAVIDAAKAIAAIA 764
A D S +++VFGV ALE + +R IVTGWNQ+RADP+VW L GF ++ E L D+ A E ADCV+ GG +DAAK ++ +A
Sbjct: 354 ADDGPLSRKSKMVFGVGALETICDRIIQCDRKRVYIVTGWNQSRADPLVWVLQKACDDGKLEYRFGFGVSSGKYRVHESGLADLERLVNDAREWGADCVIGYGGGTALDAAKMVSLLA 471
BLAST of mRNA_L-digitata_M_contig10193.1.1 vs. uniprot
Match: A0A1I1VFJ5_9DELT (Alcohol dehydrogenase, class IV n=2 Tax=Nannocystis TaxID=53 RepID=A0A1I1VFJ5_9DELT) HSP 1 Score: 60.1 bits (144), Expect = 8.980e-7 Identity = 40/97 (41.24%), Postives = 59/97 (60.82%), Query Frame = 3
Query: 474 RVVFGVNAL-EIGLVELYDTGLQRALIVTGWNQARADPVVWELLPRGFDLAWHSVSAEPSLTDVAEGAALALEHRADCVVAMGGAAVIDAAKAIAAI 761
R+VFGV A ++G + + G +RAL+VTG + ARA+PV+ + G +V+ EP++ D G A A D VVA+GG + +DA KAIAA+
Sbjct: 12 RIVFGVGAAAQVGPIAA-EHG-RRALVVTGRDPARAEPVLENIRAAGLAATVFAVAGEPTVADAERGVAAARACDCDVVVAIGGGSPLDAGKAIAAL 106
BLAST of mRNA_L-digitata_M_contig10193.1.1 vs. uniprot
Match: A0A1V5RWW4_9CHLR (Alcohol dehydrogenase 2 n=1 Tax=Chloroflexi bacterium ADurb.Bin325 TaxID=1852859 RepID=A0A1V5RWW4_9CHLR) HSP 1 Score: 59.3 bits (142), Expect = 1.620e-6 Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 3
Query: 459 FSADTRVVFGVNALEIGLVELYDTGLQRALIVTGWNQARADPVVWELLPRGFDLAWHSVSAEPSLTDVAEGAALALEHRADCVVAMGGAAVIDAAKAIAAI 761
F+ R++FG L + + G + AL+VTG +++RADP+ L G A SV EP+ + EGA H D V+ +GG + IDAAKAIA +
Sbjct: 5 FATAQRIIFGAGTLRQAGPLIAELG-RAALLVTGEDRSRADPLRAVLDAAGVTHATFSVPGEPTTDEAREGAEQVAAHGCDIVIGIGGGSAIDAAKAIAVL 104
BLAST of mRNA_L-digitata_M_contig10193.1.1 vs. uniprot
Match: B1ZPD9_OPITP (Iron-containing alcohol dehydrogenase n=1 Tax=Opitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1) TaxID=452637 RepID=B1ZPD9_OPITP) HSP 1 Score: 58.9 bits (141), Expect = 2.170e-6 Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = 3
Query: 459 FSADTRVVFGVNALEIGLVELYDTGLQRALIVTGWNQARADPVVWELLPRGFDLAWHSVSAEPSLTDVAEGAALALEHRADCVVAMGGAAVIDAAKAIAAI 761
F+ R++FG L G +RAL+VTG N ARA PV+ L G +V+ EP+ D A GA A D V+ GG + +DAAKAIAA+
Sbjct: 5 FATANRILFGAGVLAELPAAARALG-RRALVVTGRNPARAQPVLDLLASTGLATTTFAVAGEPTTDDAAYGAEQARAAGCDFVIGFGGGSALDAAKAIAAL 104
BLAST of mRNA_L-digitata_M_contig10193.1.1 vs. uniprot
Match: A0A7C7DRA6_9CHLR (Iron-containing alcohol dehydrogenase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C7DRA6_9CHLR) HSP 1 Score: 58.9 bits (141), Expect = 2.170e-6 Identity = 42/104 (40.38%), Postives = 60/104 (57.69%), Query Frame = 3
Query: 459 FSADTRVVFGVNAL-EIGLVELYDTGL-QRALIVTGWNQARADPVVWELLPRGFDLAWHSVSAEPSLTDVAEGAALALEHRADCVVAMGGAAVIDAAKAIAAIA 764
F+ R++FG L EIG + G +RAL+VTG N RA+ ++ L + +SV+ EP++ D G A A A+ +VA GG +VIDA KAIAA+A
Sbjct: 5 FATAQRILFGEGTLAEIGAIS---RGFGERALVVTGANPQRAERLLALLAAAELQPSLYSVAHEPTVEDAIAGVAAAKRAGAEVIVAFGGGSVIDAGKAIAALA 105
BLAST of mRNA_L-digitata_M_contig10193.1.1 vs. uniprot
Match: A0A085WN93_9DELT (Alcohol dehydrogenase n=3 Tax=Archangiaceae TaxID=39 RepID=A0A085WN93_9DELT) HSP 1 Score: 58.9 bits (141), Expect = 2.190e-6 Identity = 40/102 (39.22%), Postives = 53/102 (51.96%), Query Frame = 3
Query: 459 FSADTRVVFGVNALEIGLVELYDTGLQRALIVTGWNQARADPVVWELLPRGFDLAWHSVSAEPSLTDVAEGAALALEHRADCVVAMGGAAVIDAAKAIAAIA 764
F+ TRV+FG L + G +R +IVTG RA P+ L G V EP+L EG A A+ D +VA+GG +V+DA KAIAA+A
Sbjct: 9 FATATRVLFGAGRLAEAPEVVRALGGRRVMIVTGSTPVRAAPLREGLDRLGLSTVLFRVEGEPTLELAREGTATAIAAGCDALVALGGGSVLDAGKAIAALA 110
BLAST of mRNA_L-digitata_M_contig10193.1.1 vs. uniprot
Match: UPI000BAB1869 (iron-containing alcohol dehydrogenase n=1 Tax=Rhodobacterales TaxID=204455 RepID=UPI000BAB1869) HSP 1 Score: 58.5 bits (140), Expect = 2.890e-6 Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = 3
Query: 462 SADTRVVFGVNALEIGLVELYDTGLQRALIVTGWNQARADPVVWELLPRGFDLAWHSVSAEPSLTDVAEGAALALEHRADCVVAMGGAAVIDAAKAIAAIAYADKD 779
+A R +FG + E+ G R L+V G + + D + EL G L + EP L DV + A+A +HRA+C+V++GG A+ID KA+A + ++ D
Sbjct: 7 TAPNRTIFGRDCRVTTADEIARIG-SRVLLVRGRSVSWVDELAAELTRLGGSLKIVCSAGEPDLDDVRDAVAIARDHRAECIVSVGGGAIIDLGKAVAGLCVSEGD 111 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10193.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig10193.1.1 >prot_L-digitata_M_contig10193.1.1 ID=prot_L-digitata_M_contig10193.1.1|Name=mRNA_L-digitata_M_contig10193.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=258bp MTRRSRAGLALTSVLCALSPSPSEPFLAPAAVSRREASTTLFAVSTCGTAback to top mRNA from alignment at L-digitata_M_contig10193:1122..7268- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig10193.1.1 ID=mRNA_L-digitata_M_contig10193.1.1|Name=mRNA_L-digitata_M_contig10193.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=6147bp|location=Sequence derived from alignment at L-digitata_M_contig10193:1122..7268- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig10193:1122..7268- >mRNA_L-digitata_M_contig10193.1.1 ID=mRNA_L-digitata_M_contig10193.1.1|Name=mRNA_L-digitata_M_contig10193.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=774bp|location=Sequence derived from alignment at L-digitata_M_contig10193:1122..7268- (Laminaria digitata LdigPH10_18mv male)back to top |