mRNA_L-digitata_M_contig100637.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig100637.2.1
Unique NamemRNA_L-digitata_M_contig100637.2.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig100637.2.1 vs. uniprot
Match: A0A3C1KQ26_9GAMM (Anti-sigma factor n=9 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KQ26_9GAMM)

HSP 1 Score: 481 bits (1238), Expect = 3.450e-172
Identity = 219/226 (96.90%), Postives = 222/226 (98.23%), Query Frame = 1
Query:    1 MTDNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGATFPAHDHPLGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSHEGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAEILVLRGSFADEHGHYSTHCWLRIPAGGTVNPISDDYCELYIKEGGFTY 678
            M DNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGA+FPAHDHP GEEILVLEGVFSDEHGDWPAGSYLLNPEGF+HAPFS EGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAE+LVLRGSFADEHGHY THCWLRIPAGGTVNPISDDYCELYIKEGGFTY
Sbjct:    1 MADNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGASFPAHDHPQGEEILVLEGVFSDEHGDWPAGSYLLNPEGFQHAPFSREGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAEVLVLRGSFADEHGHYGTHCWLRIPAGGTVNPISDDYCELYIKEGGFTY 226          
BLAST of mRNA_L-digitata_M_contig100637.2.1 vs. uniprot
Match: A0A2N5Y5A5_9GAMM (Anti-sigma factor n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y5A5_9GAMM)

HSP 1 Score: 424 bits (1091), Expect = 8.960e-150
Identity = 192/226 (84.96%), Postives = 206/226 (91.15%), Query Frame = 1
Query:    1 MTDNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGATFPAHDHPLGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSHEGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAEILVLRGSFADEHGHYSTHCWLRIPAGGTVNPISDDYCELYIKEGGFTY 678
            MTD+ + LNGDLS R VVD Q+MDWTPSP G VLRKRLH VGQ+ESGQVTSLVRYEPGA+FPAHDHP GEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFS EGCLLFVKLRQYPG DREHVAI T  +PWQPS+RKNTSWKKLYAQEPYTDFMRLESWD P+AIGQINFPQGAEILVL+GSFAD+ G Y THCWLRIPAGG ++P S++YCELYIKEGGFTY
Sbjct:    1 MTDSTIVLNGDLSRRVVVDTQSMDWTPSPAGQVLRKRLHLVGQAESGQVTSLVRYEPGASFPAHDHPQGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSREGCLLFVKLRQYPGADREHVAIDTTARPWQPSVRKNTSWKKLYAQEPYTDFMRLESWDTPAAIGQINFPQGAEILVLKGSFADDEGSYRTHCWLRIPAGGAIHPTSNEYCELYIKEGGFTY 226          
BLAST of mRNA_L-digitata_M_contig100637.2.1 vs. uniprot
Match: A0A2D8IS44_9GAMM (Anti-sigma factor n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D8IS44_9GAMM)

HSP 1 Score: 391 bits (1005), Expect = 1.150e-136
Identity = 172/226 (76.11%), Postives = 195/226 (86.28%), Query Frame = 1
Query:    1 MTDNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGATFPAHDHPLGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSHEGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAEILVLRGSFADEHGHYSTHCWLRIPAGGTVNPISDDYCELYIKEGGFTY 678
            M+D+   LNGDLS R V+ P+ + WTPSPGGHVLRKR HRVG  ESGQVTSLVRYEPGA FPAHDHP GEEILVLEGVFSDEHGDWPAGSYLLNPEGF H PFS +GCLLFVKLRQ+PG DREHVA+ T  +PWQPS++K+ SWKKLYAQEPYTDFMRLE+WD P+ +G+INFPQGAE+LVL+GSF+D  G Y  H WLRIPAGG++ P S+DYCELYIKEGGF+Y
Sbjct:    1 MSDSNTPLNGDLSQRIVMRPEHLSWTPSPGGHVLRKRFHRVGAQESGQVTSLVRYEPGANFPAHDHPQGEEILVLEGVFSDEHGDWPAGSYLLNPEGFTHQPFSRDGCLLFVKLRQFPGADREHVAVDTRARPWQPSVKKSVSWKKLYAQEPYTDFMRLEAWDTPAELGRINFPQGAELLVLKGSFSDARGSYGLHTWLRIPAGGSLEPTSNDYCELYIKEGGFSY 226          
BLAST of mRNA_L-digitata_M_contig100637.2.1 vs. uniprot
Match: A0A5C8ZZG8_9GAMM (Anti-sigma factor n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C8ZZG8_9GAMM)

HSP 1 Score: 378 bits (971), Expect = 2.660e-131
Identity = 167/226 (73.89%), Postives = 193/226 (85.40%), Query Frame = 1
Query:    1 MTDNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGATFPAHDHPLGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSHEGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAEILVLRGSFADEHGHYSTHCWLRIPAGGTVNPISDDYCELYIKEGGFTY 678
            MTD   A+NGDLS R VVD Q+M W+ SPG  V R+R+HRVG +ESGQVTS+VRYEPGA FP+HDHP GEEILVLEGVFSDE GDWPAGSYLLNPEGF+HAP+S EGC L VKLRQYPG DR+ VAI T ++PWQPS+R+N+ WKKLYAQEPYTDFMRLE+WD P  +GQ+NFP+GAE+ VL+GSFAD  G Y THCWLRIPAGG++ P S++YCELYIKEGGFTY
Sbjct:    1 MTDENQAINGDLSKRVVVDTQSMPWSASPGAEVWRRRVHRVGPAESGQVTSVVRYEPGARFPSHDHPQGEEILVLEGVFSDEQGDWPAGSYLLNPEGFRHAPWSKEGCTLLVKLRQYPGADRDKVAIQTLDRPWQPSVRRNSQWKKLYAQEPYTDFMRLEAWDCPGDLGQVNFPRGAELFVLKGSFADAQGTYGTHCWLRIPAGGSLTPTSNEYCELYIKEGGFTY 226          
BLAST of mRNA_L-digitata_M_contig100637.2.1 vs. uniprot
Match: UPI0019D36214 (cupin domain-containing protein n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D36214)

HSP 1 Score: 378 bits (971), Expect = 2.660e-131
Identity = 166/226 (73.45%), Postives = 190/226 (84.07%), Query Frame = 1
Query:    1 MTDNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGATFPAHDHPLGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSHEGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAEILVLRGSFADEHGHYSTHCWLRIPAGGTVNPISDDYCELYIKEGGFTY 678
            MTD+  A+NGDLS R  V+   M W+ SPG  V RKR+HRVG +ESGQVTS+VRYEPGA FP+HDHP GEEILVLEGVFSDE GDWPAGSYLLNPEGF+HAP+S +GC LFVKLRQYPG DRE VA+ T +  W+PS+R+N  WKKLYAQEPY+DFMRLE+WD P+ +GQINFP+GAE+ VL G FADEHG Y THCWLRIPAGG++ P SDDYCELYIKEGGFTY
Sbjct:    1 MTDSNKAINGDLSKRVAVETSDMPWSASPGVDVWRKRVHRVGPTESGQVTSVVRYEPGARFPSHDHPQGEEILVLEGVFSDEQGDWPAGSYLLNPEGFRHAPWSEQGCTLFVKLRQYPGADRERVALQTRDSQWRPSVRRNVQWKKLYAQEPYSDFMRLEAWDAPAELGQINFPRGAELFVLSGRFADEHGEYGTHCWLRIPAGGSITPTSDDYCELYIKEGGFTY 226          
BLAST of mRNA_L-digitata_M_contig100637.2.1 vs. uniprot
Match: UPI00167B3D38 (cupin domain-containing protein n=1 Tax=Halioglobus pacificus TaxID=930806 RepID=UPI00167B3D38)

HSP 1 Score: 370 bits (951), Expect = 1.800e-128
Identity = 161/226 (71.24%), Postives = 191/226 (84.51%), Query Frame = 1
Query:    1 MTDNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGATFPAHDHPLGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSHEGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAEILVLRGSFADEHGHYSTHCWLRIPAGGTVNPISDDYCELYIKEGGFTY 678
            MT++  ALN DLS+R  +D   M +TPSPGGHVLRKRLHRVG +E+GQVTS+V+Y+PGA FPAHDH  GEEILVL+G+FSDEHGDWPAG+YLLNPEGF+H+PFS +GCLLFVKLRQ+ G DR+H+A+ T ++ W+PS+RK  SWKKLYAQEPYTDFMRLE WD P  +GQ+NFPQGAE+LVL G FAD  GHY  H WLRIPAGGT+ P+SD  CE+YIKEGGFTY
Sbjct:    1 MTNDEEALNADLSVRLAIDTDAMAFTPSPGGHVLRKRLHRVGPAEAGQVTSIVQYQPGAQFPAHDHLEGEEILVLDGIFSDEHGDWPAGTYLLNPEGFRHSPFSKDGCLLFVKLRQFHGRDRQHIALQTRDEAWRPSVRKTVSWKKLYAQEPYTDFMRLERWDSPQEMGQLNFPQGAELLVLEGGFADGQGHYPVHAWLRIPAGGTLTPVSDARCEVYIKEGGFTY 226          
BLAST of mRNA_L-digitata_M_contig100637.2.1 vs. uniprot
Match: A0A5C8ZXS5_9GAMM (Anti-sigma factor n=2 Tax=Parahaliea TaxID=1857932 RepID=A0A5C8ZXS5_9GAMM)

HSP 1 Score: 370 bits (951), Expect = 2.960e-128
Identity = 164/226 (72.57%), Postives = 188/226 (83.19%), Query Frame = 1
Query:    1 MTDNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGATFPAHDHPLGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSHEGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAEILVLRGSFADEHGHYSTHCWLRIPAGGTVNPISDDYCELYIKEGGFTY 678
            MT+   A+NGDLS R VV  Q M W+ SPG  V RKR+HRVG +ESGQVTS+VRYEPGA FP HDHP GEEILVLEGVFSDE GDWPAGSYLLNPEGF+HAP+S +GC LFVKLRQ+PG DR+ VA+ T ++PWQ S+R++  WKKLYAQEPYTDFMRLE+WD P+ +GQINFP+GAE+ VL+G FAD HG Y TH WLRIPAGG + P SDDYCELYIKEGGFTY
Sbjct:    1 MTNENQAINGDLSQRVVVATQAMPWSASPGADVWRKRVHRVGAAESGQVTSVVRYEPGARFPGHDHPQGEEILVLEGVFSDEQGDWPAGSYLLNPEGFRHAPWSEQGCTLFVKLRQFPGADRQKVAMQTQDQPWQSSVRRSVQWKKLYAQEPYTDFMRLEAWDSPAELGQINFPRGAELFVLKGRFADAHGEYGTHTWLRIPAGGALTPNSDDYCELYIKEGGFTY 226          
BLAST of mRNA_L-digitata_M_contig100637.2.1 vs. uniprot
Match: A0A7W2YKL5_9GAMM (Cupin domain-containing protein n=1 Tax=Sediminihaliea albiluteola TaxID=2758564 RepID=A0A7W2YKL5_9GAMM)

HSP 1 Score: 366 bits (940), Expect = 1.350e-126
Identity = 163/226 (72.12%), Postives = 188/226 (83.19%), Query Frame = 1
Query:    1 MTDNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGATFPAHDHPLGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSHEGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAEILVLRGSFADEHGHYSTHCWLRIPAGGTVNPISDDYCELYIKEGGFTY 678
            M +   A++GDLS R VVD Q M W+PSP   V RKRLH+VG  ESGQVTS+VRYEPGA F  HDHP GEEILVLEGVFSDE GDWPAGSYLLNPEGF HAP+S  GC LFVKLRQ+PG DRE VAI T ++ WQ S+R++  W+KLYAQ+PYTDFMRLE+WD P  +GQINFPQGAE+LV++GSF+DE+GHY TH WLRIPAGG +NPISDDYCE+YIKEGGF+Y
Sbjct:    1 MNNKYQAIHGDLSKRVVVDTQAMSWSPSPANKVWRKRLHQVGPGESGQVTSIVRYEPGARFHKHDHPEGEEILVLEGVFSDEQGDWPAGSYLLNPEGFCHAPWSETGCTLFVKLRQFPGHDRERVAIQTRDQAWQSSVRRSVQWQKLYAQDPYTDFMRLEAWDSPDEMGQINFPQGAEVLVIKGSFSDENGHYGTHSWLRIPAGGLLNPISDDYCEVYIKEGGFSY 226          
BLAST of mRNA_L-digitata_M_contig100637.2.1 vs. uniprot
Match: A0A4R2KPA9_9GAMM (ChrR-like anti-ECFsigma factor n=1 Tax=Chromatocurvus halotolerans TaxID=1132028 RepID=A0A4R2KPA9_9GAMM)

HSP 1 Score: 360 bits (924), Expect = 2.420e-124
Identity = 156/224 (69.64%), Postives = 188/224 (83.93%), Query Frame = 1
Query:    7 DNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGATFPAHDHPLGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSHEGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAEILVLRGSFADEHGHYSTHCWLRIPAGGTVNPISDDYCELYIKEGGFTY 678
            D++V LN D S R  VD + M+WTPSPGGHVLRKRLH VG++E+GQVTSLV+Y P + FP H+HP GEEILVLEGVFSDE GD+PAGSYLLNPEGF H PFS EGCLLFVKLRQYPG DRE +A+ T ++PW+ S+RK  SWKKLYAQEPYTDF RLE+WDEP+++G++NFP GAEILV+RG F+DEHGHY  + WLR+P GG++ P S+ YCE++IKEGGF Y
Sbjct:    2 DDKVFLNADFSRRVAVDTEKMEWTPSPGGHVLRKRLHLVGRAEAGQVTSLVQYLPDSEFPEHNHPDGEEILVLEGVFSDETGDYPAGSYLLNPEGFSHKPFSREGCLLFVKLRQYPGQDRERIAVQTADQPWRSSVRKGASWKKLYAQEPYTDFSRLEAWDEPASLGRLNFPGGAEILVIRGEFSDEHGHYGQYSWLRVPQGGSITPTSNSYCEVFIKEGGFAY 225          
BLAST of mRNA_L-digitata_M_contig100637.2.1 vs. uniprot
Match: A0A095WZM8_9GAMM (Uncharacterized protein n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A095WZM8_9GAMM)

HSP 1 Score: 339 bits (869), Expect = 6.170e-116
Identity = 147/226 (65.04%), Postives = 179/226 (79.20%), Query Frame = 1
Query:    1 MTDNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVTSLVRYEPGATFPAHDHPLGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSHEGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQEPYTDFMRLESWDEPSAIGQINFPQGAEILVLRGSFADEHGHYSTHCWLRIPAGGTVNPISDDYCELYIKEGGFTY 678
            M+ ++  LNGD   R  +D Q + W+PSPGGHV RKRLH VG++E+GQVTSLVRYEPGA FP HDHP GEEILVLEGVFSD+ G WPAG+YLLNPEG+ HAP+S +GC LFVKLRQYPG DRE +A+ T ++PW+ S+RK  +WKKLYAQEPY D  RLE W+EP+++G + FP GAEILVL G+F D++G Y    WLRIPAGGT+ P   +YCELY+KEGGF Y
Sbjct:    1 MSQDQQVLNGDFRQRLTIDTQDLPWSPSPGGHVQRKRLHLVGRAEAGQVTSLVRYEPGARFPRHDHPEGEEILVLEGVFSDDRGHWPAGTYLLNPEGYSHAPYSEDGCTLFVKLRQYPGNDREKIALETADQPWRGSVRKGVAWKKLYAQEPYADSARLERWEEPASLGTLTFPAGAEILVLAGAFTDDYGTYRRWSWLRIPAGGTLAPTGGEYCELYVKEGGFAY 226          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100637.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1KQ26_9GAMM3.450e-17296.90Anti-sigma factor n=9 Tax=Halieaceae TaxID=1706372... [more]
A0A2N5Y5A5_9GAMM8.960e-15084.96Anti-sigma factor n=1 Tax=Kineobactrum sediminis T... [more]
A0A2D8IS44_9GAMM1.150e-13676.11Anti-sigma factor n=1 Tax=Haliea sp. TaxID=1932666... [more]
A0A5C8ZZG8_9GAMM2.660e-13173.89Anti-sigma factor n=1 Tax=Parahaliea maris TaxID=2... [more]
UPI0019D362142.660e-13173.45cupin domain-containing protein n=1 Tax=Parahaliea... [more]
UPI00167B3D381.800e-12871.24cupin domain-containing protein n=1 Tax=Halioglobu... [more]
A0A5C8ZXS5_9GAMM2.960e-12872.57Anti-sigma factor n=2 Tax=Parahaliea TaxID=1857932... [more]
A0A7W2YKL5_9GAMM1.350e-12672.12Cupin domain-containing protein n=1 Tax=Sediminiha... [more]
A0A4R2KPA9_9GAMM2.420e-12469.64ChrR-like anti-ECFsigma factor n=1 Tax=Chromatocur... [more]
A0A095WZM8_9GAMM6.170e-11665.04Uncharacterized protein n=2 Tax=Halieaceae TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100637contigL-digitata_M_contig100637:262..939 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1121937.AUHJ01000010_gene1690
PFAMsCupin_7
Model size678
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.68e-173
EggNOG OGsCOG1917@1|root,COG1917@2|Bacteria,1QU6U@1224|Proteobacteria,1T1P4@1236|Gammaproteobacteria
Ec32 ortholog descriptionRmlC-like jelly roll fold
Ec32 orthologEc-16_004810.1
DescriptionAnti-ECFsigma factor ChrR
Cds size678
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406608.8118505-CDS-L-digitata_M_contig100637:261..9391682406608.8118505-CDS-L-digitata_M_contig100637:261..939Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig100637 262..939 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100637.2.1prot_L-digitata_M_contig100637.2.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig100637 262..939 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig100637.2.1

>prot_L-digitata_M_contig100637.2.1 ID=prot_L-digitata_M_contig100637.2.1|Name=mRNA_L-digitata_M_contig100637.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=226bp
MTDNRVALNGDLSLRTVVDPQTMDWTPSPGGHVLRKRLHRVGQSESGQVT
SLVRYEPGATFPAHDHPLGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKH
APFSHEGCLLFVKLRQYPGPDREHVAIATHNKPWQPSIRKNTSWKKLYAQ
EPYTDFMRLESWDEPSAIGQINFPQGAEILVLRGSFADEHGHYSTHCWLR
IPAGGTVNPISDDYCELYIKEGGFTY
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mRNA from alignment at L-digitata_M_contig100637:262..939+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig100637.2.1 ID=mRNA_L-digitata_M_contig100637.2.1|Name=mRNA_L-digitata_M_contig100637.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=678bp|location=Sequence derived from alignment at L-digitata_M_contig100637:262..939+ (Laminaria digitata LdigPH10_18mv male)
ATGACCGACAACCGCGTTGCCCTCAACGGCGACCTCTCCCTGCGCACCGT AGTGGACCCGCAAACCATGGACTGGACACCCAGCCCCGGCGGCCACGTGT TGCGTAAACGCCTGCACCGCGTGGGGCAGTCGGAATCGGGGCAGGTGACC TCGCTTGTGCGCTATGAGCCAGGGGCCACCTTCCCCGCTCATGACCATCC CCTGGGCGAGGAGATTCTGGTGCTCGAGGGCGTTTTCTCCGATGAACACG GCGACTGGCCCGCCGGCAGCTACCTGCTGAACCCGGAAGGATTCAAGCAC GCACCCTTTTCACACGAGGGCTGCCTGCTGTTCGTGAAACTGCGGCAGTA TCCAGGGCCCGACCGGGAACACGTTGCCATCGCGACCCACAACAAGCCCT GGCAGCCGTCGATACGCAAGAACACCAGCTGGAAGAAACTCTACGCCCAG GAACCCTACACCGACTTCATGCGCCTGGAGAGCTGGGACGAGCCGTCTGC GATCGGCCAGATCAACTTCCCCCAGGGCGCGGAGATTCTGGTGTTGCGCG GCAGCTTCGCCGATGAACACGGGCATTACAGCACGCACTGCTGGCTGCGC ATCCCTGCAGGTGGCACGGTCAACCCGATCAGTGACGACTACTGCGAGTT GTACATCAAGGAAGGCGGTTTCACCTAC
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Coding sequence (CDS) from alignment at L-digitata_M_contig100637:262..939+

>mRNA_L-digitata_M_contig100637.2.1 ID=mRNA_L-digitata_M_contig100637.2.1|Name=mRNA_L-digitata_M_contig100637.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=678bp|location=Sequence derived from alignment at L-digitata_M_contig100637:262..939+ (Laminaria digitata LdigPH10_18mv male)
ATGACCGACAACCGCGTTGCCCTCAACGGCGACCTCTCCCTGCGCACCGT
AGTGGACCCGCAAACCATGGACTGGACACCCAGCCCCGGCGGCCACGTGT
TGCGTAAACGCCTGCACCGCGTGGGGCAGTCGGAATCGGGGCAGGTGACC
TCGCTTGTGCGCTATGAGCCAGGGGCCACCTTCCCCGCTCATGACCATCC
CCTGGGCGAGGAGATTCTGGTGCTCGAGGGCGTTTTCTCCGATGAACACG
GCGACTGGCCCGCCGGCAGCTACCTGCTGAACCCGGAAGGATTCAAGCAC
GCACCCTTTTCACACGAGGGCTGCCTGCTGTTCGTGAAACTGCGGCAGTA
TCCAGGGCCCGACCGGGAACACGTTGCCATCGCGACCCACAACAAGCCCT
GGCAGCCGTCGATACGCAAGAACACCAGCTGGAAGAAACTCTACGCCCAG
GAACCCTACACCGACTTCATGCGCCTGGAGAGCTGGGACGAGCCGTCTGC
GATCGGCCAGATCAACTTCCCCCAGGGCGCGGAGATTCTGGTGTTGCGCG
GCAGCTTCGCCGATGAACACGGGCATTACAGCACGCACTGCTGGCTGCGC
ATCCCTGCAGGTGGCACGGTCAACCCGATCAGTGACGACTACTGCGAGTT
GTACATCAAGGAAGGCGGTTTCACCTAC
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