mRNA_L-digitata_M_contig10039.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig10039.1.1
Unique NamemRNA_L-digitata_M_contig10039.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
[Close]
BLAST of mRNA_L-digitata_M_contig10039.1.1 vs. uniprot
Match: A0A6H5KIH8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIH8_9PHAE)

HSP 1 Score: 412 bits (1060), Expect = 1.020e-139
Identity = 218/294 (74.15%), Postives = 244/294 (82.99%), Query Frame = 2 
Query:   47 MWAT--APSVGRSAGKQRLVRVGNLLPVIVFRSFFPDLSGVIPKGNHRAHREKRVVPYSPEQFFAVVADVKSYKKFVPFCVDSRVVRVIDDNTMEADMSVGFKLFTETYTSRVVVRKPSEVAVKAIDSRLFSSLDSTWRFRPGKAANTTLVDFSVEFEVKNLLAAQAMDVFFEEVALQQVKAFERRCRHLYGASPAAKRKRAVEEAAAEAAGLADPCGGFLFAVKDALAVESQVNVVRDACLRHFGQG--GVDVGDGLTAAQFQAACLDLAKEKDFENFSELAEDKGLAAAVYS 916
            MW+T  A  V R AG   L RVG LLP IV RSFFPDLSGVI  GN R HRE+RVVPY PEQF+ VVADV +YK FVPFCVDSRVV+VID+NTMEA+MSVGFKLFTE YTSRVV + PSEVAVKA+ SRLFSSLDSTWRFRPG A NTT++DFSVEFEVKNLLAAQAMD+FF+EV     KAFERRCRHLYG SP+AKRKRA +EAAA+AAG+++PCGGFLF VKDALAVE+ V VVRDACLRH G+G  G   G GLTAAQFQAAC DLAKE DF  F +LA++ GL++AVYS
Sbjct:    1 MWSTNAARPVRRGAG---LHRVGRLLPAIVCRSFFPDLSGVITNGNRRTHRERRVVPYLPEQFYGVVADVDNYKNFVPFCVDSRVVKVIDENTMEAEMSVGFKLFTEKYTSRVVTKPPSEVAVKAMHSRLFSSLDSTWRFRPGTAPNTTVIDFSVEFEVKNLLAAQAMDMFFDEV-----KAFERRCRHLYGTSPSAKRKRAAQEAAAQAAGISNPCGGFLFQVKDALAVETHVKVVRDACLRHAGRGRGGGAEGGGLTAAQFQAACADLAKEDDFAEFKKLADNDGLSSAVYS 286
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BLAST of mRNA_L-digitata_M_contig10039.1.1 vs. uniprot
Match: A0A835ZID9_9STRA (Polyketide_cyc domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID9_9STRA)

HSP 1 Score: 177 bits (448), Expect = 6.300e-52
Identity = 83/149 (55.70%), Postives = 116/149 (77.85%), Query Frame = 2 
Query:  182 RAHREKRVVPYSPEQFFAVVADVKSYKKFVPFCVDSRVVRVID--DNTMEADMSVGFKLFTETYTSRVVVRKPSEVAVKAIDSRLFSSLDSTWRFRPGKAANTTLVDFSVEFEVKNLLAAQAMDVFFEEVALQQVKAFERRCRHLYGAS 622
            + + E+++V ++P+Q ++VV+DV +YKKFVPFCVDSR++R +     T++A+++VGFK+FTE YTSRV ++ PS VA +A+DSR+FS L STW F+PG    TT + F VEFEVKN +AA A++ FFE+V  QQVKAFERRC+ LYG S
Sbjct:    1 KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYGES 149
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BLAST of mRNA_L-digitata_M_contig10039.1.1 vs. uniprot
Match: D8LFG9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG9_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 9.450e-46
Identity = 116/294 (39.46%), Postives = 129/294 (43.88%), Query Frame = 2 
Query:   47 MWA--TAPSVGRSAGKQRLVRVGNLLPVIVFRSFFPDLSGVIPKGNHRAHREKRVVPYSPEQFFAVVADVKSYKKFVPFCVDSRVVRVIDDNTMEADMSVGFKLFTETYTSRVVVRKPSEVAVKAIDSRLFSSLDSTWRFRPGKAANTTLVDFSVEFEVKNLLAAQAMDVFFEEVALQQVKAFERRCRHLYGASPAAKRKRAVEEAAAEAAGLADPCGGFLFAVKDALAVESQVNVVRDACLRHFGQG--GVDVGDGLTAAQFQAACLDLAKEKDFENFSELAEDKGLAAAVYS 916
            MW+   A  V R AG   L RVG LLP I++RSFFPDLSGVIP GN R HRE+RVVPY PEQFF VVADV +YK FVPFCVDSRVV+VIDDNTMEA+MSVGFK                                                                                                                                    VVRDACLRH G+G  G    DGLTAAQFQAAC DLAKE DF  F +LA++ GL++AVYS
Sbjct:    1 MWSKHVARPVRRGAG---LHRVGRLLPAILYRSFFPDLSGVIPNGNRRTHRERRVVPYLPEQFFGVVADVDNYKNFVPFCVDSRVVKVIDDNTMEAEMSVGFK------------------------------------------------------------------------------------------------------------------------------------VVRDACLRHAGRGRGGGAEDDGLTAAQFQAACADLAKEDDFAEFKKLADNDGLSSAVYS 159
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BLAST of mRNA_L-digitata_M_contig10039.1.1 vs. uniprot
Match: A0A225X2L0_9STRA (EF-hand domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2L0_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.270e-40
Identity = 95/263 (36.12%), Postives = 145/263 (55.13%), Query Frame = 2 
Query:  182 RAHREKRVVPYSPEQFFAVVADVKSYKKFVPFCVDSRVVRVIDDNTMEADMSVGFKLFTETYTSRVVVRKPSEVAVKAIDSRLFSSLDSTWRFRPGKAANTTLVDFSVEFEVKNLLAAQAMDVFFEEVALQQVKAFERRCRHLYGASPAAKRKRAVEEAAAEAAGLADPCGGFLFAVKDALAVESQVNVVRDACLRHFGQ--GGV----------------DVGDGLTAAQFQAACLDLAKEKDFENFSELAEDKGLAAAVYS 916
            ++H E RVVP+S  + F VVADV  Y +F+PFCV+SRV+R  +DN MEA + VGF +FTE+YTSRV++ +P+++AVKAIDS  F  ++S W F+P   + +  +DF V FEV + L A A+ +FF++VAL Q+ AF  R R +YG  P    + ++++         +       A       +      R+A  R   +  GG+                D  + L    F AAC+ L+ E  +E+  +++E   LA AV+S
Sbjct:   34 KSHTETRVVPFSCSEMFDVVADVDRYSEFLPFCVESRVLRRPNDNVMEAALRVGFNIFTESYTSRVLMIRPNKIAVKAIDSPTFKRIESEWIFKPYTTSGSCKIDFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKVYGTGPRTIPQTSIKKELVSTPESTETVRRVATATDATQTSQDDEAARREAKARASRRIKGGISAQTYTDLAAVFHDYADKDEKLYYGGFAAACMALSNE--YEDMKDVSESAALAGAVFS 294
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BLAST of mRNA_L-digitata_M_contig10039.1.1 vs. uniprot
Match: A0A6A3EIG8_9STRA (EF-hand domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EIG8_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.640e-40
Identity = 75/148 (50.68%), Postives = 108/148 (72.97%), Query Frame = 2 
Query:  182 RAHREKRVVPYSPEQFFAVVADVKSYKKFVPFCVDSRVVRVIDDNTMEADMSVGFKLFTETYTSRVVVRKPSEVAVKAIDSRLFSSLDSTWRFRPGKAANTTLVDFSVEFEVKNLLAAQAMDVFFEEVALQQVKAFERRCRHLYGASP 625
            ++H E RVVP+S  + F VVADV SY +F+PFCV+SRV+R  +DN MEA + VGF +FTE+YTSRV++ +PS++AVKAIDS  F  ++S W F+P +   +  ++F V FEV + L A A+ +FF++VAL Q+ AF  R R +YG++P
Sbjct:   43 KSHTETRVVPFSCSEMFDVVADVDSYSEFLPFCVESRVLRRPNDNVMEAALRVGFNIFTESYTSRVLMIRPSKIAVKAIDSPTFKRIESEWVFKPCRTPGSCQIEFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKMYGSAP 190
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BLAST of mRNA_L-digitata_M_contig10039.1.1 vs. uniprot
Match: K3WIA0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIA0_GLOUD)

HSP 1 Score: 156 bits (394), Expect = 3.310e-40
Identity = 70/144 (48.61%), Postives = 107/144 (74.31%), Query Frame = 2 
Query:  182 RAHREKRVVPYSPEQFFAVVADVKSYKKFVPFCVDSRVVRVIDDNTMEADMSVGFKLFTETYTSRVVVRKPSEVAVKAIDSRLFSSLDSTWRFRPGKAANTTLVDFSVEFEVKNLLAAQAMDVFFEEVALQQVKAFERRCRHLY 613
            ++H+E +VVP+SPE+ + VVADV  Y +F+PFCV+SRV+R  ++N MEA + +GFK+FTE+YTSRV++++P ++ VKAI+S  F  ++S W FRP    +T  +DF V FEV + L A A+ +FF++VA+ Q+ AF RR + +Y
Sbjct:   52 KSHKETKVVPFSPEEMYDVVADVDKYHEFLPFCVESRVLRQPNENVMEAALKIGFKVFTESYTSRVIMKRPEKIVVKAIESPTFKRIESEWVFRPTATPDTCAIDFKVTFEVASFLHANAIQLFFDDVAVAQLNAFIRRAKKVY 195
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BLAST of mRNA_L-digitata_M_contig10039.1.1 vs. uniprot
Match: H3H2N5_PHYRM (EF-hand domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2N5_PHYRM)

HSP 1 Score: 155 bits (392), Expect = 5.760e-40
Identity = 82/184 (44.57%), Postives = 116/184 (63.04%), Query Frame = 2 
Query:   74 RSAGKQRLVRVGNLLPVIVFRSFFPDLSGVIPKGNHRAHREKRVVPYSPEQFFAVVADVKSYKKFVPFCVDSRVVRVIDDNTMEADMSVGFKLFTETYTSRVVVRKPSEVAVKAIDSRLFSSLDSTWRFRPGKAANTTLVDFSVEFEVKNLLAAQAMDVFFEEVALQQVKAFERRCRHLYGASP 625
            RS  + R VR    L        FP  S  + K    +H E RVVP+S  + FAVVADV  Y +F+PFCV+SRV+R  +DN MEA + +GF +FTE+YTSRV++ +P+++A KAIDS  F  ++S W F+P     +  ++F V FEV + L A A+ +FF++VAL Q+ AF  R R +YG +P
Sbjct:    6 RSGRRLRAVRTALWLDQRASFFSFPSASQALVK----SHTETRVVPFSCSEMFAVVADVAHYSEFLPFCVESRVLRSPNDNVMEAALRIGFNIFTESYTSRVLMIRPNKIATKAIDSPTFKRIESEWVFKPCSTPGSCEINFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKMYGTTP 185
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BLAST of mRNA_L-digitata_M_contig10039.1.1 vs. uniprot
Match: A0A329RPM1_9STRA (EF-hand domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RPM1_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.660e-39
Identity = 109/303 (35.97%), Postives = 158/303 (52.15%), Query Frame = 2 
Query:   80 AGKQRLVRVGNLLPVIVFR-SFF--PDLSGVIPKGNHRAHREKRVVPYSPEQFFAVVADVKSYKKFVPFCVDSRVVRVIDDNTMEADMSVGFKLFTETYTSRVVVRKPSEVAVKAIDSRLFSSLDSTWRFRPGKAANTTLVDFSVEFEVKNLLAAQAMDVFFEEVALQQVKAFERRCRHLYGASP-----AAKRKRAVEEAAAEAAGLADPCGGFLFAVKDALAVESQVNVVRDACLRHFGQGGV----------------DVGDGLTAAQFQAACLDLAKEKDFENFSELAEDKGLAAAVYS 916
            A + R++R  +  P +V R SFF  P  S  + K    +H E RVVP+S  + F VVADV  Y +F+PFCV+SRV+R  +DN MEA + VGF +FTE+YTSRV++ +P+++A KAIDS  F  ++S W F+P     +  VDF V FEV + L A A+ +FF++V+L Q+ AF  R R +YG +P     A  +    E + A    +     G   A       +     V  A      +GG+                D    L    F AAC+ L+ E  +E+  ++ E   LA AV+S
Sbjct:    4 ARRLRVLRARS--PYLVSRASFFSFPSPSRSLVK----SHTETRVVPFSCTEMFDVVADVDRYSEFLPFCVESRVLRRPNDNVMEAALRVGFNIFTESYTSRVLMIRPNKIATKAIDSPTFKRIESEWVFKPCATPGSCEVDFKVTFEVSSFLHANAIQLFFDDVSLTQLNAFIGRARKMYGTAPRPVPPARVKAEPTEGSTARTVEIESTGSGVTEAASATDEDDEAAKRVAKARASRRIKGGISAQTYSDLAAVFADYADKDGKLYYGGFTAACMALSDE--YEDMKDINESAALAGAVFS 298
[Close]
BLAST of mRNA_L-digitata_M_contig10039.1.1 vs. uniprot
Match: M4B3J1_HYAAE (EF-hand domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3J1_HYAAE)

HSP 1 Score: 153 bits (387), Expect = 3.080e-39
Identity = 100/271 (36.90%), Postives = 147/271 (54.24%), Query Frame = 2 
Query:  182 RAHREKRVVPYSPEQFFAVVADVKSYKKFVPFCVDSRVVRVIDDNTMEADMSVGFKLFTETYTSRVVVRKPSEVAVKAIDSRLFSSLDSTWRFRPGKAANTTLVDFSVEFEVKNLLAAQAMDVFFEEVALQQVKAFERRCRHLYGASP-------AAKRKRAVEEAAAEAAGLADPCGGFLFAVKD---ALAVESQVNVVRDACLRHFGQGGV----------------DVGDGLTAAQFQAACLDLAKEKDFENFSELAEDKGLAAAVYS 916
            ++H E RVVP+S  + F VVADV+ Y  F+PFCV+SRV+R  ++N MEA + VGF +FTE+YTSRV++ +P+++A KAIDS  F  ++S W F+P +   +  + F V FEV + L A A+ +FF++VAL Q+ AF  R R  YG+ P       A +    V+ AA   A  A    G   +  D   A   E++  V R        +GG+                D    L    F AAC+ L+ E  +E+  +++E   LA AV+S
Sbjct:   34 KSHTETRVVPFSCSEMFDVVADVERYSDFLPFCVESRVLRRPNENVMEAALRVGFNIFTESYTSRVLMIRPNKIATKAIDSPTFKRIESEWMFKPCETPGSCEIAFRVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKTYGSKPRSILHASAKEDSPTVQSAANSTATNATESDGLTTSTTDDEEAPVQEAEATVSRRT------KGGISTQTYRDLAIVFDDYADKNGKLYYGGFMAACMALSDE--YEDMKDVSESATLAGAVFS 296
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BLAST of mRNA_L-digitata_M_contig10039.1.1 vs. uniprot
Match: A0A3M6VIK1_9STRA (EF-hand domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIK1_9STRA)

HSP 1 Score: 150 bits (378), Expect = 5.550e-38
Identity = 96/270 (35.56%), Postives = 146/270 (54.07%), Query Frame = 2 
Query:  182 RAHREKRVVPYSPEQFFAVVADVKSYKKFVPFCVDSRVVRVIDDNTMEADMSVGFKLFTETYTSRVVVRKPSEVAVKAIDSRLFSSLDSTWRFRPGKAANTTLVDFSVEFEVKNLLAAQAMDVFFEEVALQQVKAFERRCRHLYGASP-------------------------AAKRKRAVEEAAAEAAGLADPCGGFLFAVKDALAVESQVNVVRDACLRHFGQGGVDVGDGLTAAQFQAACLDLAKEKDFENFSELAEDKGLAAAVYS 916
            ++H E RVVP+S  Q F VVADV  Y +F+PFCV+SRV+R  +DN MEA + VGF +FTE YTSRV++ +P ++A KAIDS  F  ++S W F+P     +  ++F V FEV + L A A+ +FF++VAL Q+ AF  R R +Y ++P                         A+KR  +   +  + A L  P G     +K  ++ ++  ++   A    +     D    L    F AAC+ L+ E  +E+  +++E   LA AV+S
Sbjct:   42 KSHTETRVVPFSRTQMFDVVADVNRYSEFLPFCVESRVLRRPNDNVMEAALRVGFNIFTEAYTSRVLMIRPDKIATKAIDSPTFKRIESEWIFKPCNTPGSCEIEFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKMYKSTPQSVPPASVKKDESALLVEGSNAETGASKRTDSTLSSENDKALLQAPEGRASRRIKGCISTQNYKDLA--AVFDDYA----DKNGKLYYGGFTAACMALSGE--YEDMKDVSESATLAGAVFS 303
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10039.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIH8_9PHAE1.020e-13974.15EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZID9_9STRA6.300e-5255.70Polyketide_cyc domain-containing protein (Fragment... [more]
D8LFG9_ECTSI9.450e-4639.46EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A225X2L0_9STRA1.270e-4036.12EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
A0A6A3EIG8_9STRA2.640e-4050.68EF-hand domain-containing protein n=3 Tax=Phytopht... [more]
K3WIA0_GLOUD3.310e-4048.61Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3H2N5_PHYRM5.760e-4044.57EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
A0A329RPM1_9STRA2.660e-3935.97EF-hand domain-containing protein n=2 Tax=Phytopht... [more]
M4B3J1_HYAAE3.080e-3936.90EF-hand domain-containing protein n=1 Tax=Hyaloper... [more]
A0A3M6VIK1_9STRA5.550e-3835.56EF-hand domain-containing protein n=1 Tax=Peronosp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10039contigL-digitata_M_contig10039:1612..8292 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LFG9
Preferred nameCOQ10
PFAMsPolyketide_cyc
Model size918
Max annot lvl2759|Eukaryota
KEGG koko:K18588
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006091,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0015980,GO:0016020,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901576,GO:1901661,GO:1901663
Exons5
Evalue1.95e-46
EggNOG OGsCOG2867@1|root,KOG3177@2759|Eukaryota
Descriptionubiquinone binding
Cds size870
COG categoryI
BRITEko00000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10039.1.1prot_L-digitata_M_contig10039.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig10039 1658..8292 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406606.6755183-UTR-L-digitata_M_contig10039:1611..16571682406606.6755183-UTR-L-digitata_M_contig10039:1611..1657Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig10039 1612..1657 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406606.6859484-CDS-L-digitata_M_contig10039:1657..17671682406606.6859484-CDS-L-digitata_M_contig10039:1657..1767Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10039 1658..1767 +
1682406606.693098-CDS-L-digitata_M_contig10039:2465..26581682406606.693098-CDS-L-digitata_M_contig10039:2465..2658Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10039 2466..2658 +
1682406606.7102275-CDS-L-digitata_M_contig10039:5737..59651682406606.7102275-CDS-L-digitata_M_contig10039:5737..5965Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10039 5738..5965 +
1682406606.7193365-CDS-L-digitata_M_contig10039:6972..71051682406606.7193365-CDS-L-digitata_M_contig10039:6972..7105Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10039 6973..7105 +
1682406606.7266374-CDS-L-digitata_M_contig10039:8086..82921682406606.7266374-CDS-L-digitata_M_contig10039:8086..8292Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10039 8087..8292 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig10039.1.1

>prot_L-digitata_M_contig10039.1.1 ID=prot_L-digitata_M_contig10039.1.1|Name=mRNA_L-digitata_M_contig10039.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=290bp
MWATAPSVGRSAGKQRLVRVGNLLPVIVFRSFFPDLSGVIPKGNHRAHRE
KRVVPYSPEQFFAVVADVKSYKKFVPFCVDSRVVRVIDDNTMEADMSVGF
KLFTETYTSRVVVRKPSEVAVKAIDSRLFSSLDSTWRFRPGKAANTTLVD
FSVEFEVKNLLAAQAMDVFFEEVALQQVKAFERRCRHLYGASPAAKRKRA
VEEAAAEAAGLADPCGGFLFAVKDALAVESQVNVVRDACLRHFGQGGVDV
GDGLTAAQFQAACLDLAKEKDFENFSELAEDKGLAAAVYS
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mRNA from alignment at L-digitata_M_contig10039:1612..8292+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig10039.1.1 ID=mRNA_L-digitata_M_contig10039.1.1|Name=mRNA_L-digitata_M_contig10039.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=6681bp|location=Sequence derived from alignment at L-digitata_M_contig10039:1612..8292+ (Laminaria digitata LdigPH10_18mv male)
AGCGAAGTAGGCAGCACCGCGCAGCGAGGATAGACACATCGGCAGTATGT
GGGCGACTGCCCCATCAGTGGGAAGATCTGCGGGCAAGCAGCGCTTGGTT
CGCGTCGGAAACCTTCTTCCTGTCATCGTTTTCCGGTCCTTCTTCCCCGA
CTTGAGGTACTACAGCACTAAACACGCTCACGAAAGTGTTTTTCCGTTCG
AAATCATGCCACACAACGGTACAACAGCATCAGAACAAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCACCGCCGTATGCTGAAATACCAAGTGATCT
GTACTATCAAATGTCCCTCTCATACCAGGCCTTTTCTGTTGTTGTATCTC
CCAGCTCTTGCCTGGGTTGCTGCCTTTTTGCTGTGGGGGCAGAAGCCAAG
CCAAAACTTAAAAATCAACAGCGACGTGTCGTACGTACCCGCTGGTATGA
TACCACTGCTGTACCGGCAGGCATACCACCATTATACGTAGACGTGGCAA
CTCAGCACGGTCTTTGCTCTTGCAATTGGCTTGCTGCGTTTTCGCCAACC
GCGGGCGGTGGGCCGGTCGTAGCTGAACCAACCTGTTGGTTATATATAGC
ACTACCCACTGTTAATAGGATTGCATATAAACAGACAGACGCTCTATACC
GGAGGAAGAGGAGGAAGGGGAAAGGGCGAGTGTTCCGTCTGCAATTTGAT
GCTCACCCACTCGCCGATCGAGTTTCGCAGCACGCACGCATGTATACGAC
GATGGCCGCGTGTTTTCCCAACAACACCAACGTCGTCATCGTCCCACGTC
TCTCCTGCCTTCGGCATGCTCTGCTCTGGGCTCTGCGCCGGCTTCCGCTG
ACAGTGGTGTTATCCCTAAGGGCAACCACAGGGCACACCGCGAGAAGAGG
GTGGTTCCATACTCTCCAGAGCAGTTCTTCGCGGTGGTTGCGGACGTGAA
GAGCTACAAGAAGTTCGTGCCGTTCTGCGTGGACTCGAGGGTCGTAAGAG
TCATCGATGACAACACCATGGAGGCTGACATGAGCGTTGGATTCAAGGTA
CGGCAGCAGTAGTAGCAGGCAGCAGTTGCAGTTATAGCCGCGATAGCAGC
AGCAATAGCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAATAGCAGCGGCGGCGGCAGCGGCAGTAGCAGCAGAAGCAGCAGCAGCA
GCAGCAGTAGCAGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGTAGCAGCAGCAGCAACAGCAGCAGTAGCGTAGCAGCGGCAGCAGCAGC
AGCATCGGCAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCGGCAGCGGCAG
CAGTAGCACGAGCGGCGGCGGCAGCGGCGGCCGCAGCAGCAGCAGCAGTG
GCAGTAGACACCGAAGAATACACGCAACCCTAACATAAACGCGGCCGCCT
GTACTGCGACCTTTGGTGGTCTGCATAACAACTGCTCAATGCACCAATAA
ATCGTAGACCAAGACATAAGAGCTTTGCGAGAAAGCCTGCACCCTGCATC
CAGCCTGCAGAACTTCTGTTTCTACATGAGGGAGACAAAAAAAAAAGGCA
GCCCTTGTGCGCGCTTTGCATGCGCTCGCTTGCGCTCTGCCGCTGAGCTT
GGAGTAACGCTGTGGATTCGTCAGGTCGCGCCTTACCGTATACCAGTCTG
ACAATAAGTATAAGCAACTCCAAACGTATAATATACAATAAGTAAGTTGC
TTATATTTACGTATACCAGGTAACACGCAAGATAACACACCCCCTGGGAC
GAATTTTCCGAGCCGAGTTTTCTCCAAAGAAATAAGGGGGGCACACACAA
CGAAAAGGCCGGCTTTTGAAAGATCTCGACGGGATCTTTCCGTGGACGCA
TCGCTCGGCGTTGTTTGCGCTTCCCCGCCCATTGTCGAGAAAAATCAGCT
TCGAAAGTCGTCCGACGGGGCGTGTGCTATCATGCGTGTTGTACGGCACC
CGCTCGAAATGAAAAGGAGGTCGTCCCCTTGAGCCTCTTGCCTCTCTCGG
TCGAGACAGAAAAAAGCTCGCACGCTCTTCTTGGGCTAACGTTTCGGTCC
GTTGGTCGGGACCATCTACTACGCGCACGGCGGGCGCCCCTATGATGATG
ATGTTGATGTTGATGATGTTCTCACATTAGCGCTCATTTTCCCTGGATTC
CCGCCCGTGGTCAGTGAATACAGGCTCAACAAGAAAGCGTCTAGATGGAG
GTTGTACCCTACGATCCACAACGATTATGACAGTATCTCCTGCAAAAAGT
CATGTGACTCCGCCGACAGCTTTGCGGAGATCGCCAGTGTGTTGGTATGT
TTGTGGAGCCTGTAGTCTATCATATGATAGGTACCTCTTGTGTCGCTGCT
GACGCAGTGAGCGGGGGCGGGAAGGATTAACCCCTATGGCACTGCACTCC
CGTTTTGGGAGCAAATTACTTGGAATTAGAGTGAAAACAGATGTTTTTGT
ACAGTGCGGGCTACGGTAGGGGGTTCACTTTTAGGTCCTTTGTTTTTAGC
CGCTCAGAGCCACTTTTTAGTGACTACTACTTAGTAGGCGCAAACTTCAC
TTTTTTGTCTTTTGGATTCGCTGTAAAGCACCACACCACTGGACTGTTTG
TTACGCTGCTCCAACAAAGTATTTTCAAGTCCAATTTTGGAGTGAGGTAC
AGAGCCACTCGCCCGAGTGGCCTAAACGCGGTATTGAAAACGAAAACGGG
TGTAGCCCCCCTCTGCCGTAGCATCAGTCTGCTGTGTACCAGTCTGCTGC
TGTACGTGGCGACGAGCATCGCTTTAAGGTTTGTTTTTCTTGCGCAGGCA
ATCTCGAGCTGCGTAGTAGAGGGCAGGTCACTGCTGCACCCCGGTTGTTG
GGTTGCCGGGGATGTCCCTCCCGATCAGTTCGAAGCTTGTAGTGTTCCTG
GCATCTGTTTCGACCCATTATTTCAAGCATCCCGACGCGCGAAACGTCTC
GGCACTGTGTACCCTCCCGACGAGCACAAGTGTCACAGCCGCGAGACTCG
CCAAGAAAACTACGACGTCCGTAGCGTTAAGCACGACGATTGTGGGTTCT
AGATTACCACGGCGTCTTTCGCAAGACGAGCGTAGTTATGCCGAACGACT
GGGTAGCTGGCTGGCTGGCTACTCAAACAGTCGAGGCCGGAAGCGAGTGG
ATCAACTTTGCAGCTTGTTTCGCTCTGAATCTCCTTCTGCCCTCCTTCGG
CCCCCGCCGAAACCCGACGTTAACGCCTTCCTCCCCCCATCAAACTCTGC
CGAAACCCAACTGGCGACTGTCTGACTCGCTGTCCAACGTGTTAACGCCT
TCCTCTCCCCATCGAACTCCGCATCCATACGGTAGAGGGGGTATACTATA
GACTACTATTGTACTTTTGGGCCCACTTTTTTCTGGCTGCGTGTACTCCG
TAACTGAGGAATTGCCCAATACCTTTGCAGTCCCATTTGCAATACCTTTG
CAATCCCATTTGCGATACCTTTTGCTATCCCATTGATATTTTTCTAGACC
AGCCATTGGGACTGCTCATCGCGTGGCGCGTAATGTGCATTTTTTTAAAA
TCAATTTCAGGTTTTCGGTGGGGTATAGTCTACTCGTAGAAGTCCTCAGG
TGAGGAGCCTGACAAGAAAGCACCACTATGGCCGGAAACGTAAGGACCGT
TTGGTTTTCATATTTATGCCCCAAACGCTCCTTCCATTTCCGCCCACAGT
GGTAGGTAACTCCCCGACCGTAGATACGTTTATAGCATGGCATCTCCGCT
GAAATCCGACTGGCCGGCTCGCTGTCCAACCTGATTTTATCTCAAAAGGG
GGATTGTTATGTTGGATGCTATATGCCAACCCGGAAGTATATGAAAAGCA
CGTGAAAACGCATCCGGACCCGTCCCCTTCCTCCCCCCCTCCCCCTTCCT
TTTCTTCCTCCTCCAGCTCTTTACCGAGACGTACACGTCGAGAGTGGTCG
GTCGCGATTTTATCTCAAAAGGGCATTGTTATGTTGGATATGACAGGCCA
ACCCGGCAGTGTATGAAAAGCCAAGTGAAAAACATCCCAACCCGTCCCCT
CCCCCCTTCCTTTTCTTCGCCTCCAGTTGTTTACCGAGACGTACACGTCT
CGAGTGGTGGTGCGGAAGCCAAGCGAGGTGGCGGTGAAGGCAATCGACTC
GCGCCTGTTCTCCTCGCTGGACAGCACGTGGCGCTTCCGGCCCGGTAAGG
CGGCGAACACCACCCTGGTCGACTTTTCCGTCGAGTTCGAGGTTAAGAAC
CTGCTCGCGGCGCAAGCAATGGACGTGTTTTTCGAAGAGGTGGCCTTACA
GCAGGTGATGCGTTTTTCACAAACATCAGACAGATCAGATAGATAGATAG
ATATAATCCCCGTTGCACGCACAATCTAGATCTTTTGGCGCAGATAGATA
CATAGATCCCTGCTTTGTATAAGTTGTATGGTCTGCACGATCTAGATTAC
GTTTCCCCGGGCGGGATAAGTATGACACGGCTCTTGCGCACATATTTTCC
GGGCGGGATCTGTATGATACAACTCTTGCGCAGCATCGCATAACGGCAAA
TATAGGATCTACAGCAGCAGATGATCGGTAGATCGTGATCTGTCCGATGT
GTGAACTTTTTGCTGCATGTATACATACCGTATAATATACTCTACGTACC
TATATATTTATTGTACCTGGTACATATTAGATGATTGTCAGGATGGCAGC
AAAATGTTAATACTTTTACTATTACGGGAGAACGAACTGTAAGTAAATCA
GGACCAAATCGGGTAATAAAACGTAGTAGGGGAAAATTCGTGTTTTGATG
CCCATCGTTGGTCCTGATTACTGTGATAGGATTATACCCCGACTCTGTTT
GCAAGTGGTTTGTCCTCAAAACGTGGGTGGGTGCCTTTTGGAAGGGGCTA
CAGCAGTAAGCGTCCAAACATCTCAGCGCGCCTTGAGCTGACTCTTTCGA
CGACGGACCCATGGGGCGGCGCATCGCGTGGAGGGGTGATTACCACTTGT
TGGACAATTTGTTTTTTCTGGCTGTGGCCGACGCTCGATTCGCTGTGGCG
GACGCTCGATTTGGTGGGCGTGGGATGGGTGCCAAGCGCTATTTAATAGA
AGGGTGCAAATATGTGTGTTTTTGTGCTGGTGTGTGTGTTTGGCCAATTA
AACACCCGGAAACTTCAGTAGTTGACCAATGAAAGGGCGTCGTCGAATAA
GCATGTGTGTGTTTGTGTTGACCTGTGAAAGCTCCCGAAGCATCCGTAGA
TGACCAATGGGAGGTTTTTGTCGAATAAGTGGTGAACTCTGCTGCTTGCG
TGAGTGAGCAGGTGAAGGCGTTTGAGAGACGGTGTCGGCATCTGTATGGA
GCCTCGCCGGCGGCAAAGAGAAAGAGGGCGGTGGAGGAGGCCGCGGCGGA
GGCGGCGGGGCTTGCTGACCCTTGCGGAGGCTTTCTGTTTGCGGGTGAGG
GGCAATTGGAACGCCCACTTTTTTTTGTTCGTACGCTTCGCTTCTTTTGT
GCTTTTCGCACCCATAAATGAACTTTTGTCCCAAATCTTGTTCAACTAAC
GGGAGGAACAGCTCAGTGAAATTGTGAAACTATGGTAAATTGTCGGCTTT
GTTTTTACCGTTCCGATTTACTTCGTAGATATCTTATTATGCAGTACTGT
ACCTTCTCGCCAATGGTCTAGTCATGAGTTTGTTTTTTTCTGGATGCTTT
TTATTGCGAGCGAACGCAAACTTCTTGATTTTGACGGCGCCAAGAAAATG
GGGGACCGCCTCCGCCGTTACGGTCCCGAAAGGTATACCTACTTTTGGCT
TTTGCCCAAAAAAATATTTGGGCTGGTTTCTGTTTGTTTATGTATATCCT
GAAGCACGAGTTTTCCTAGCGACAGCTATTCGATATGTTCCGGTAGGTGA
CAACGTTTTGCGAATACTTTAATTGTACTACTCGTACACTGCACAGAAAC
AGTACCCACCTTAGCCCTTTTCGGACCGCAGTGCCGTTTTGGGGACAAAT
TACTTGGATTTAGAGTTAGAGTGTCCCCAAAACGGGAGTGCGGTCCTAAA
GACCACCTCGGGACAGGCCATTTCAGTGGTCTCATCTCCATGTTTGGTCT
TATCCTTTAACTACGGCCTATGCTAATTCCAAGTGGTTTTTCTAGGACAA
GCCGATTTGTCTGGCCTTATCCACCCGATAGTCTTAAACTGGATGGTCTT
AAAGTGGATATTCCACTGTATCTAAGTGTAATTCCAAGCAATTTGTCCCC
GAACCGGGAGTGCGGTTCTAAAGGGGTTAATCGTGATCTACAGTAGATCG
ATCTAGATCGTGATCTAGATCGCGATTTGTCCGATGTATACACCCTTTTG
CCCTCACCGACAAGCTTTCATGAAATTCTATCCGTTCTACGTACGTATCG
TCCGCCGAATCCTTGCGCCCGGCAGTCAAAGACGCCTTGGCCGTGGAGTC
ACAGGTTAACGTAGTCCGGGACGCGTGTTTGCGGCACTTCGGCCAGGGCG
GGGTTGATGTGGGGGACGGGCTGACGGCAGCCCAGTTTCAAGCGGCGTGC
TTGGACCTAGCGAAGGAGAAGGACTTTGAGAACTTTAGCGAGCTGGCGGA
GGACAAGGGTTTGGCGGCGGCAGTCTACTCG
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Coding sequence (CDS) from alignment at L-digitata_M_contig10039:1612..8292+

>mRNA_L-digitata_M_contig10039.1.1 ID=mRNA_L-digitata_M_contig10039.1.1|Name=mRNA_L-digitata_M_contig10039.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=870bp|location=Sequence derived from alignment at L-digitata_M_contig10039:1612..8292+ (Laminaria digitata LdigPH10_18mv male)
ATGTGGGCGACTGCCCCATCAGTGGGAAGATCTGCGGGCAAGCAGCGCTT
GGTTCGCGTCGGAAACCTTCTTCCTGTCATCGTTTTCCGGTCCTTCTTCC
CCGACTTGAGTGGTGTTATCCCTAAGGGCAACCACAGGGCACACCGCGAG
AAGAGGGTGGTTCCATACTCTCCAGAGCAGTTCTTCGCGGTGGTTGCGGA
CGTGAAGAGCTACAAGAAGTTCGTGCCGTTCTGCGTGGACTCGAGGGTCG
TAAGAGTCATCGATGACAACACCATGGAGGCTGACATGAGCGTTGGATTC
AAGTTGTTTACCGAGACGTACACGTCTCGAGTGGTGGTGCGGAAGCCAAG
CGAGGTGGCGGTGAAGGCAATCGACTCGCGCCTGTTCTCCTCGCTGGACA
GCACGTGGCGCTTCCGGCCCGGTAAGGCGGCGAACACCACCCTGGTCGAC
TTTTCCGTCGAGTTCGAGGTTAAGAACCTGCTCGCGGCGCAAGCAATGGA
CGTGTTTTTCGAAGAGGTGGCCTTACAGCAGGTGAAGGCGTTTGAGAGAC
GGTGTCGGCATCTGTATGGAGCCTCGCCGGCGGCAAAGAGAAAGAGGGCG
GTGGAGGAGGCCGCGGCGGAGGCGGCGGGGCTTGCTGACCCTTGCGGAGG
CTTTCTGTTTGCGGTCAAAGACGCCTTGGCCGTGGAGTCACAGGTTAACG
TAGTCCGGGACGCGTGTTTGCGGCACTTCGGCCAGGGCGGGGTTGATGTG
GGGGACGGGCTGACGGCAGCCCAGTTTCAAGCGGCGTGCTTGGACCTAGC
GAAGGAGAAGGACTTTGAGAACTTTAGCGAGCTGGCGGAGGACAAGGGTT
TGGCGGCGGCAGTCTACTCG
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