mRNA_L-digitata_M_contig10038.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig10038.1.1
Unique NamemRNA_L-digitata_M_contig10038.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig10038.1.1 vs. uniprot
Match: D7FVZ6_ECTSI (C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ6_ECTSI)

HSP 1 Score: 457 bits (1177), Expect = 2.230e-151
Identity = 273/555 (49.19%), Postives = 324/555 (58.38%), Query Frame = 2
Query:  164 FEIVATSFDGPLDLLRKYPETCKILAGLRALGAIALHNVDATSLDARVVGTAPSRRR----QHEQYEHIIFNHPHTGTEDMRRHRSFLGHLFHAVMHASAQPRDPAVNSARADDRSSGCDEGSSSGRGGVKAAPVAPAGGFSAVSVLSPGGAVHVTLAGDQPERWGLREQAARHGFSLAHRERFPSERIEGYMTKRHQTGRSFQRRSLDSETLSFTWTGXXXXXXXXXXXXXXXXXXXATADGGSP--RTFPPWLWPEVDLRSDETRRS-SELFVGEAGEAAGEADVNEIMDTPTSEGNPQQSPVSSGSXXXXXXXXXXXXSGKVALPELCELCGKRYKTPQALRTHTRQLHELGQEGGKPLAPRKEEPCPHSGCGRVFTSDRALEQHVSAKHGGGGNVDIKPDWFEETIYLLQPXXXXXXXXXXXXXXXXXXXXXXCEDXXXXXXXXXXXXXXXDSDGDAVGERLENVFIGSREECDVPRGEGLAVDHAEAEEGVDDVWHCVICGFWFSTAGNARRHLDNLRPPIEGAVTVHECATCLKDFGSRRALLQHANFC 1807
            FEIVATSFDG LDLL KY E   I+A LR++G   LHNVDAT+LD+RV+  +PS RR    Q +Q+EH+IFNHPHTGTEDMRRHRSFLGH FHAV +++     P          S  C      G G V A P          ++L+PGGAVHVTLA DQPERWGL EQAARHGFSL HR RFP+E+I+GYMTKRHQTGRSF++R   SETLSF+W                     A  D G+    T PPWLWPEV +  DE   + +E    E   A G    ++ +D PT   +        G             + +  LPE+CELCGKRYK+ QALRTHTRQ HELGQEGG  +AP+KEE CPH  CGRVFTSDRAL+QHVSAKH G  NVDIKPDWF  +IY L+P XXXX                                    ++G A       V     E   VP  E  A       EG      C +CG+WF++  + ++HLDNLRPPIEGAVT ++C TC+KDFGSRRALLQHA FC
Sbjct:   55 FEIVATSFDGRLDLLSKYAEAPGIVAALRSVGVTVLHNVDATALDSRVLQVSPSDRRRAQQQQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAIGSTGPVGGGG-----SGACGVSDIGGGGAVAAVPGMADRQGGKGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRRFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQA---------------ARGDDGAAFGSTLPPWLWPEVVMCGDEASPARAETATDEPVRAGG----SDAVDAPTPAVDDNVRTRGGGRKGGGCTDRTGAAAAEALLPEVCELCGKRYKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHPNCGRVFTSDRALDQHVSAKHSGD-NVDIKPDWFVGSIYHLEPPXXXXVPTDGDMVVERGQDGGI----PAANAAGSDQICRGTAEG-AEATTTPKVVETPPEMLGVPAREVPATTVCTNIEGNSLCQRCDVCGYWFTSPEDLQQHLDNLRPPIEGAVTRYDCGTCVKDFGSRRALLQHAKFC 579          
BLAST of mRNA_L-digitata_M_contig10038.1.1 vs. uniprot
Match: W7TQ78_9STRA (C2h2 zinc finger protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ78_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.590e-15
Identity = 76/239 (31.80%), Postives = 100/239 (41.84%), Query Frame = 2
Query:  167 EIVATSFDGPLDLLRKYPETCKILAGLRALGAIA--LHNVDATSL--DARVVGTAPSRRRQH---------------------EQYEHIIFNHPHTGTEDMRRHRSFLGHLFHAVMHASAQPRDPAVNSARADDRSSGCDEGSSSGRGGVKAAPVAPAGGFSAVSVLSPGGAVHVTLAGDQPERWGLREQAARHGFSLAHRERFPSERIEGYMT---KRHQTGRSFQRRSLDSETLSFT 799
            +++ATSFD P +L RKY E+   +  L ALGA    ++ VDA ++    R V     +R                        E ++H+IFNHPHTG ED+ RHR+ L H   +     A                                                 GG VHVTLAGDQ +RW L + AAR GF L H   F  +    +     KRHQ+G+SF+ R L S T SFT
Sbjct:   38 QLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTE-----------------------------------------GGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFT 235          
BLAST of mRNA_L-digitata_M_contig10038.1.1 vs. uniprot
Match: A0A4D9D783_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D783_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 4.020e-15
Identity = 78/244 (31.97%), Postives = 102/244 (41.80%), Query Frame = 2
Query:  167 EIVATSFDGPLDLLRKYPETCKILAGLRALGAIA--LHNVDATSL--DARVVGTAPSRRRQH---------------------EQYEHIIFNHPHTGTEDMRRHRSFLGHLFHAVMHASAQPRDPAVNSARADDRSSGCDEGSSSGRGGVKAAPVAPAGGFSAVSVLSPGGAVHVTLAGDQPERWGLREQAARHGFSLAH-----RERFPSERIEGYMTKRHQTGRSFQRRSLDSETLSFTWTG 808
            +++ATSFD P +L +KY E+   +  L ALGA    L+ VDA ++    R V     +R +                      E ++H+IFNHPHTG ED+ RHR+ L H   +     A                                                 GG VHVTLAGDQ +RW L + AAR GF L H     R+  P         KRHQ+G+SF+ R L S T SFT  G
Sbjct:   38 QLLATSFDNPQELHKKYTESHATVTRLEALGARVRVLYGVDALNILETLRHVHMEEGKRAESFREPPHDSVSNCARTADGQPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTE-----------------------------------------GGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDP--PPVDIKRHQSGKSFRIRGLPSFTYSFTLEG 238          
BLAST of mRNA_L-digitata_M_contig10038.1.1 vs. uniprot
Match: A0A8K1C3C0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3C0_PYTOL)

HSP 1 Score: 87.4 bits (215), Expect = 1.100e-14
Identity = 68/212 (32.08%), Postives = 93/212 (43.87%), Query Frame = 2
Query:  170 IVATSFDGPLDLLRKYPETCKILAGLRALGAIALHNVDATSLDARVVGTAPSRRRQH--EQYEHIIFNHPHTGTEDMRRHRSFLGHLFHAVMHASAQPRDPAVNSARADDRSSGCDEGSSSGRGGVKAAPVAPAGGFSAVSVLSPG-GAVHVTLAGDQPERWGLREQAARHGFSLAHR----ERFPSERIEGYMTKRHQTGRSFQRRSLDSE 784
            +VA+S+D   +LL KYPE+ +I   L+ LGA  LH +DAT+L A +   A           ++ IIFNHPH G E++RRH+S L H +                                                 SA  +L P  G +H+TLA  QPERW  RE+  + G  L       +  P   ++ Y  KRHQ G+SF R  L  E
Sbjct:   56 LVASSYDEYQELLEKYPESIRICTQLQELGADLLHRIDATNLRATLEACASENGEVQLPTTFDVIIFNHPHCGEENVRRHQSLLSHFY------------------------------------------------ASAKELLHPTRGELHLTLADGQPERWEARERGTKAGLVLVEEIEDVDAHPVYSVD-YERKRHQNGKSFHRVLLHGE 218          
BLAST of mRNA_L-digitata_M_contig10038.1.1 vs. uniprot
Match: G5AE26_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AE26_PHYSP)

HSP 1 Score: 87.4 bits (215), Expect = 1.190e-14
Identity = 66/213 (30.99%), Postives = 99/213 (46.48%), Query Frame = 2
Query:  158 RPFEIVATSFDGPLDLLRKYPETCKILAGLRALGAIALHNVDATSLDARVVGTAPSRRRQHEQYEHIIFNHPHTGTEDMRRHRSFLGHLFHAVMHASAQPRDPAVNSARADDRSSGCDEGSSSGRGGVKAAPVAPAGGFSAVSVLSPGGAVHVTLAGDQPERWGLREQAARHGFSLAHRE--RFPSERIEG--YMTKRHQTGRSFQRRSLDSE 784
            RP ++ ATS+D   +L+ KYPE+ +I A L+ LGA  LH VDAT++   +V    +  + H     ++FNHPH G E++RRH+S L H + + +    +     V            ++   SG                          + +TLA  QPERW   ++A   G  L HR+     S+   G  Y  KRHQ G+SF + +L  E
Sbjct:   64 RPLQLTATSYDSYDELVAKYPESKRICAQLKELGASVLHRVDATNIRESLVAAGATSDKFHS----VVFNHPHCGEENVRRHQSLLSHFYASALEVLEKGEGDEV------------EQSEESG--------------------------ILLTLAEGQPERWQAVQRALSAGLKL-HRQVDNVDSDAKFGLEYERKRHQNGKSFHQVTLHGE 233          
BLAST of mRNA_L-digitata_M_contig10038.1.1 vs. uniprot
Match: A0A6A3UCE6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UCE6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.250e-14
Identity = 65/215 (30.23%), Postives = 96/215 (44.65%), Query Frame = 2
Query:  161 PFEIVATSFDGPLDLLRKYPETCKILAGLRALGAIALHNVDATSLDARVVGTAPSRRRQHEQYEHIIFNHPHTGTEDMRRHRSFLGHLFHAVMHASAQPRDPAVNSARADDRSSGCDEGSSSGRGGVKAAPVAPAGGFSAVSVLSPGGAVHVTLAGDQPERWGLREQAARHGFSLAHRERFPSERIEG-------YMTKRHQTGRSFQRRSLDSE 784
            P E+ ATS+D   +L+ KYPE+ +I A L+ LGA  LH VDAT++   +V    +  + H     ++FNHPH G E++RRH+S L H + + +    Q                                             +S    V +TLA  QPERW   ++A   G  L HR+    + ++G       Y  KRHQ G+SF + +L  E
Sbjct:   64 PLELTATSYDSYEELVAKYPESKRICAQLKELGASVLHRVDATNIRESLVAAGATPDKFHA----VVFNHPHCGEENVRRHQSLLSHFYASALEVLEQEE-------------------------------------------VSEDSGVLLTLAEGQPERWQAVQRALSAGLKL-HRQ---IDDVDGDDTFGVAYERKRHQNGKSFHQVTLHGE 227          
BLAST of mRNA_L-digitata_M_contig10038.1.1 vs. uniprot
Match: A0A7R9U7Z0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Z0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.770e-14
Identity = 65/204 (31.86%), Postives = 87/204 (42.65%), Query Frame = 2
Query:  161 PFEIVATSFDGPLDLLRKYPETCKILAGLRALGAIALHNVDATSLDARVVGTAPSRRRQHEQYEHIIFNHPHTGTEDMRRHRSFLGHLFHAVMHASAQPRDPAVNSARADDRSSGCDEGSSSGRGGVKAAPVAPAGGFSAVSVLSPGGAVHVTLAGDQPERWGLREQAARHGFSLAHRERFPSERIEGYMTKRHQTGRSFQRRS 772
            P  + ATSFD   ++ RKYPE   IL  L+       H VDA+     V+ T  + RR    ++ ++FN PH GTE+ + H  FL H+   V                                                  VL+ GGA+H+TLA  Q ERW L   A R  F +A +     ER+ GY  KRHQ G SF+RR+
Sbjct:   61 PLLLTATSFDSREEVDRKYPEAAAILEELQRADVCVRHRVDAS-----VLWTDAALRRL--PFDIVVFNFPHLGTENAKLHSKFLAHVLSGVS------------------------------------------------DVLAVGGALHLTLAEGQAERWRLSATAERLFFEVAEQVPLRLERLPGYEQKRHQCGGSFRRRT 209          
BLAST of mRNA_L-digitata_M_contig10038.1.1 vs. uniprot
Match: A0A0W8CDT8_PHYNI (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CDT8_PHYNI)

HSP 1 Score: 86.7 bits (213), Expect = 2.030e-14
Identity = 66/212 (31.13%), Postives = 99/212 (46.70%), Query Frame = 2
Query:  161 PFEIVATSFDGPLDLLRKYPETCKILAGLRALGAIALHNVDATSLDARVVGTAPSRRRQHEQYEHIIFNHPHTGTEDMRRHRSFLGHLFHAVMHASAQPRDPAVNSARADDRSSGCDEGSSSGRGGVKAAPVAPAGGFSAVSVLSPGGAVHVTLAGDQPERWGLREQAARHGFSLAHRE--RFPSERIEG--YMTKRHQTGRSFQRRSLDSE 784
            P ++ A+S+D   +L+ KYPE  +I A L+ LGA  LH VDAT+L   +V     + +    ++ +IFNHPH G E++RRH+S L H + + +          V     +D  SG                                  + +TLA  QPERW   E+A + G  L HR+     ++ + G  Y  KRHQ G+SF + +L  E
Sbjct:   63 PLQLTASSYDSYDELVAKYPECKRICAQLKELGASVLHRVDATNLRESLVAAGAEQLK----FDAVIFNHPHCGEENVRRHQSLLSHFYASALD---------VIEDNEEDEESG----------------------------------ILLTLAEGQPERWQAVERALKAGLRL-HRQVDEVDNDEVFGLVYDRKRHQNGKSFHQVTLHGE 226          
BLAST of mRNA_L-digitata_M_contig10038.1.1 vs. uniprot
Match: A0A5D6Y3S2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3S2_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.810e-14
Identity = 70/224 (31.25%), Postives = 95/224 (42.41%), Query Frame = 2
Query:  167 EIVATSFDGPLDLLRKYPETCKILAGLRALGAIALHNVDATSLDARVVGTAPSRRRQHE-------------QYEHIIFNHPHTGTEDMRRHRSFLGHLFHAVMHASAQPRDPAVNSARADDRSSGCDEGSSSGRGGVKAAPVAPAGGFSAVSVLSPGGAVHVTLAGDQPERWGLREQAARHGFSLAHR-ERFPSERIEG--YMTKRHQTGRSFQRRSLDSETL 790
            ++ A+SFD   +L  KYPE  + +  LRALGA  LH VDAT L A +     +     E             +++ ++FNHPH G E++RRHRS L H +     ASA+                                            +L+P G + +TLA  QP RW    +A R G  L  + +   S+   G  Y  KRHQ GRSF R  L  E L
Sbjct:   38 QLAASSFDSAQELAAKYPEAPRHVHQLRALGARVLHRVDATQLRASLAQAETAEVGDEEGGPAPRPASPLPARFDVVVFNHPHCGEENVRRHRSLLSHFY-----ASAR-------------------------------------------ELLAPRGEIRLTLAAGQPARWEALARARRAGLRLTQQVDDVDSDEAFGLAYERKRHQNGRSFHRVLLHGERL 213          
BLAST of mRNA_L-digitata_M_contig10038.1.1 vs. uniprot
Match: D0NMF8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMF8_PHYIT)

HSP 1 Score: 85.9 bits (211), Expect = 3.870e-14
Identity = 62/211 (29.38%), Postives = 97/211 (45.97%), Query Frame = 2
Query:  161 PFEIVATSFDGPLDLLRKYPETCKILAGLRALGAIALHNVDATSLDARVVGTAPSRRRQHEQYEHIIFNHPHTGTEDMRRHRSFLGHLFHAVMHASAQPRDPAVNSARADDRSSGCDEGSSSGRGGVKAAPVAPAGGFSAVSVLSPGGAVHVTLAGDQPERWGLREQAARHGFSLAHR-ERFPSERIEG--YMTKRHQTGRSFQRRSLDSE 784
            P ++ ATS+D   +L+ KYPE+ +I   L+ LGA  +H VDAT+L   +V     +      ++ ++FNHPH G E++RRH+S L H + + +       +               DEG+                             + +TLA  QPERW   E+A + G  L  R +   ++ + G  Y  KRHQ G+SF + +L  E
Sbjct:   63 PVQLTATSYDSYNELVAKYPESKRICGQLKELGASVMHRVDATNLRESLVAAGAEQLT----FDAVVFNHPHCGEENVRRHQSLLSHFYTSALEILEDSEE---------------DEGNG----------------------------ILLTLAEGQPERWQAVERALQAGLRLHRRVDDVDNDAVFGLKYERKRHQNGKSFHQVTLHGE 226          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10038.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVZ6_ECTSI2.230e-15149.19C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=... [more]
W7TQ78_9STRA3.590e-1531.80C2h2 zinc finger protein n=1 Tax=Nannochloropsis g... [more]
A0A4D9D783_9STRA4.020e-1531.97Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8K1C3C0_PYTOL1.100e-1432.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G5AE26_PHYSP1.190e-1430.99Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A6A3UCE6_9STRA1.250e-1430.23Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A7R9U7Z0_9STRA1.770e-1431.86Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A0W8CDT8_PHYNI2.030e-1431.13Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
A0A5D6Y3S2_9STRA2.810e-1431.25Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
D0NMF8_PHYIT3.870e-1429.38Uncharacterized protein n=2 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10038contigL-digitata_M_contig10038:596..3304 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FVZ6
PFAMsDUF2431,zf-C2H2,zf-C2H2_4,zf-C2H2_6,zf-met
Model size1816
Max annot lvl2759|Eukaryota
KEGG koko:K19307
Hectar predicted targeting categorysignal peptide
Exons6
Evalue7.22e-115
EggNOG OGsKOG4174@1|root,KOG4174@2759|Eukaryota
Ec32 ortholog descriptionC2H2 zinc finger protein
Ec32 orthologEc-01_002750.1
EC2.1.1.313
DescriptionrRNA (uridine-N3-)-methyltransferase activity
Cds size1425
COG categoryS
BRITEko00000,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10038.1.1prot_L-digitata_M_contig10038.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig10038 1340..3304 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406606.5917199-UTR-L-digitata_M_contig10038:595..6721682406606.5917199-UTR-L-digitata_M_contig10038:595..672Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig10038 596..672 +
1682406606.6030402-UTR-L-digitata_M_contig10038:923..11571682406606.6030402-UTR-L-digitata_M_contig10038:923..1157Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig10038 924..1157 +
1682406606.6127264-UTR-L-digitata_M_contig10038:1259..13391682406606.6127264-UTR-L-digitata_M_contig10038:1259..1339Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig10038 1260..1339 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406606.622288-CDS-L-digitata_M_contig10038:1339..17861682406606.622288-CDS-L-digitata_M_contig10038:1339..1786Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10038 1340..1786 +
1682406606.6309304-CDS-L-digitata_M_contig10038:2071..23411682406606.6309304-CDS-L-digitata_M_contig10038:2071..2341Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10038 2072..2341 +
1682406606.6395483-CDS-L-digitata_M_contig10038:2419..29431682406606.6395483-CDS-L-digitata_M_contig10038:2419..2943Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10038 2420..2943 +
1682406606.6480818-CDS-L-digitata_M_contig10038:3120..33041682406606.6480818-CDS-L-digitata_M_contig10038:3120..3304Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10038 3121..3304 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig10038.1.1

>prot_L-digitata_M_contig10038.1.1 ID=prot_L-digitata_M_contig10038.1.1|Name=mRNA_L-digitata_M_contig10038.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=475bp
MRRHRSFLGHLFHAVMHASAQPRDPAVNSARADDRSSGCDEGSSSGRGGV
KAAPVAPAGGFSAVSVLSPGGAVHVTLAGDQPERWGLREQAARHGFSLAH
RERFPSERIEGYMTKRHQTGRSFQRRSLDSETLSFTWTGAGSGGGGGRGG
GVAAAAVAATADGGSPRTFPPWLWPEVDLRSDETRRSSELFVGEAGEAAG
EADVNEIMDTPTSEGNPQQSPVSSGSGSDGDGDCSGNGSGKVALPELCEL
CGKRYKTPQALRTHTRQLHELGQEGGKPLAPRKEEPCPHSGCGRVFTSDR
ALEQHVSAKHGGGGNVDIKPDWFEETIYLLQPPPAPASGGGGGGGGGGGG
GGGGCEDGGGGGGDDGSGGGSGDSDGDAVGERLENVFIGSREECDVPRGE
GLAVDHAEAEEGVDDVWHCVICGFWFSTAGNARRHLDNLRPPIEGAVTVH
ECATCLKDFGSRRALLQHANFCGR*
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mRNA from alignment at L-digitata_M_contig10038:596..3304+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig10038.1.1 ID=mRNA_L-digitata_M_contig10038.1.1|Name=mRNA_L-digitata_M_contig10038.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=2709bp|location=Sequence derived from alignment at L-digitata_M_contig10038:596..3304+ (Laminaria digitata LdigPH10_18mv male)
GGGGAGGACGCGAGGCCTTGCCGCATCCTGATACTAGGTGACGGGAACTT CTCCTTCTCCCTAGCCCTGGCCCGCGGGTTGCTCCACCCCCATCCCTCGC CGATCTCAGCAGCCACAACACCAAACGCAACGACGACTACACCAGGAACA ACAACGACAACGGCAACAACAACAATATCGCCGGCAGCACCAGGAAGGGC AAGCCAAAGCCAACCTCCTCGAACCACCACCGCCACCACCACCACCACCA CCGCCTCCGCCAACGATGACATCGACACCTCTCCCCCTGCCCCTGCCGCC GGCATCCCACCTCCGCATCACCCACCAGCCAACCAAACACCGTTACCTCT ATCACCACCGTCGCCGCCGCGGCCGCGCCAACAAGAACGACGAAAACAAA ACCGGAACCGACCTTTCGAAATCGTGGCCACCTCCTTCGACGGGCCCCTC GACCTCCTCCGAAAGTACCCGGAGACGTGCAAGATCTTGGCCGGCCTGCG CGCCTTGGGGGCCATCGCGCTGCACAACGTCGACGCGACTTCGCTTGACG CGCGGGTTGTAGGTGCCGTCGCAGCAGCCGCCGGTGGCGGCGGTGGCGGT GGTAGTGGTGGCGGCGGCGGCAGCGACGGCGACAGTCCGGATAGGGCTTA CGCCGGTGAGCGAGGAACAGCACCGAGCCGTCGCCGCCAGCACGAGCAGT ACGAGCACATCATATTCAACCACCCGCACACCGGCACCGAGGACATGCGC CGACACCGGTCCTTCCTGGGACACTTATTTCACGCCGTCATGCATGCCTC CGCGCAGCCCCGAGACCCAGCGGTAAACAGCGCCCGCGCTGATGACAGAA GCAGCGGTTGCGATGAGGGCAGCAGCAGCGGTAGAGGCGGCGTCAAAGCC GCCCCCGTTGCCCCCGCTGGGGGTTTTAGCGCGGTTTCGGTTCTCTCTCC CGGGGGAGCGGTCCACGTTACGCTCGCCGGCGACCAGCCCGAACGCTGGG GGCTTCGAGAACAGGCGGCGCGACATGGCTTCTCCCTTGCCCACCGAGAG CGGTTTCCCTCGGAGCGTATCGAGGGCTATATGACGAAGCGGCACCAGAC CGGCCGCTCGTTCCAGCGCCGCAGCCTCGATTCCGAGACGCTGTCTTTCA CGTGGACCGGAGCGGGGTCTGGTGGTGGTGGTGGTCGCGGTGTTGGTGGT GGTGGTGGTCGCGGTGGTGGTGGTAGTGGTGGTGGTGGCGGCAGTAGTGG TAGCGGTGGTGGTGGTGGTGGTGATGGTAGTGGTGAGTCGGCGAAGATCT GCGATGGTTTACGCGGGGCATTCTCTTTCTCGGGCGAGGGGGACGGGATC GTTCGCTGCCGCCGTGCTGGTGGTGGTGGTCGGGGTGAGGGTGGAGCGGA CGCAGCGCTAAAAGAACTTCGTGCGGGAGGGTTTCATTCCGAAATTCCGG AGCCGGGGGGGGGCGGGGGCCGGGAGGGTGGCGTTGCTGCCGCTGCCGTG GCCGCCACCGCCGACGGTGGCAGCCCGCGCACGTTTCCTCCGTGGCTCTG GCCCGAAGTGGACTTGCGCAGCGACGAGACCCGGCGGTCAAGCGAACTGT TTGTTGGGGAGGCTGGAGAGGCCGCCGGCGAAGCCGACGTGAACGAGATC ATGGACACTCCAACATCTGAAGGAAACCCTCAGCAAAGCCCCGTCAGCAG CGGCAGCGGCAGCGACGGCGACGGCGACTGTAGTGGTAACGGTAGCGTCA GCGCCAAGAAGGAGGAGGCGGTGGCGGCGGCGGCGGTGGCGGCGGCGGCG GTGACGGCGGCGAAAGGTGTCAAGGGTAAGGTCGCTTTGCCCGAACTCTG CGAGCTGTGCGGCAAGCGCTACAAGACGCCGCAGGCGTTGCGGACGCACA CGCGGCAGCTCCACGAGCTGGGCCAGGAGGGCGGCAAGCCCTTGGCCCCG AGAAAGGAGGAGCCCTGTCCCCACTCGGGCTGCGGCCGCGTTTTCACGAG CGACAGGGCGCTCGAGCAGCACGTCTCCGCCAAGCACGGGGGCGGTGGAA ACGTCGACATCAAGCCGGACTGGTTCGAGGAGACGATCTACCTGCTCCAA CCACCGCCGGCCCCGGCGTCTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG TGGTGGTGGTGGTGGTGGTTGTGAAGATGGTGGTGGTGGTGGTGGTGACG ATGGTAGTGGTGGTGGTAGTGGTGATAGTGATGGTGACGCCGTCGGGGAG CGGCTGGAGAATGTTTTCATAGGTTCTCGCGAGGAGTGCGACGTGCCCCG AGGGGAAGGGCTGGCAGTGGACCACGCGGAGGCGGAGGAGGGAGTGGAGT GCCGCCGTCCCGACGGAGCCCCTGGGTCGGTTTCGTCGACACGTCGTGGT AGGGACGGTGGGGGTGGGGGTGGGGGTGGTTGTGACGGGGGTGGTGGTGG TGGTGGTGGTGGGGGTGGGGGTGATGGTGGTGGTGGTGGTGGTGTGGACG GTGGTGATGGTGGTGCCGGTGGTAGCGATGTATGGCACTGCGTAATCTGC GGGTTTTGGTTCTCGACGGCGGGGAACGCACGGCGCCATCTCGACAACCT TCGCCCGCCGATAGAGGGCGCGGTGACCGTGCACGAGTGCGCCACGTGCC TGAAGGACTTCGGGTCGAGGAGGGCGCTGCTCCAGCACGCCAATTTTTGC GGGCGATAG
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Coding sequence (CDS) from alignment at L-digitata_M_contig10038:596..3304+

>mRNA_L-digitata_M_contig10038.1.1 ID=mRNA_L-digitata_M_contig10038.1.1|Name=mRNA_L-digitata_M_contig10038.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=1425bp|location=Sequence derived from alignment at L-digitata_M_contig10038:596..3304+ (Laminaria digitata LdigPH10_18mv male)
ATGCGCCGACACCGGTCCTTCCTGGGACACTTATTTCACGCCGTCATGCA
TGCCTCCGCGCAGCCCCGAGACCCAGCGGTAAACAGCGCCCGCGCTGATG
ACAGAAGCAGCGGTTGCGATGAGGGCAGCAGCAGCGGTAGAGGCGGCGTC
AAAGCCGCCCCCGTTGCCCCCGCTGGGGGTTTTAGCGCGGTTTCGGTTCT
CTCTCCCGGGGGAGCGGTCCACGTTACGCTCGCCGGCGACCAGCCCGAAC
GCTGGGGGCTTCGAGAACAGGCGGCGCGACATGGCTTCTCCCTTGCCCAC
CGAGAGCGGTTTCCCTCGGAGCGTATCGAGGGCTATATGACGAAGCGGCA
CCAGACCGGCCGCTCGTTCCAGCGCCGCAGCCTCGATTCCGAGACGCTGT
CTTTCACGTGGACCGGAGCGGGGTCTGGTGGTGGTGGTGGTCGCGGTGGT
GGCGTTGCTGCCGCTGCCGTGGCCGCCACCGCCGACGGTGGCAGCCCGCG
CACGTTTCCTCCGTGGCTCTGGCCCGAAGTGGACTTGCGCAGCGACGAGA
CCCGGCGGTCAAGCGAACTGTTTGTTGGGGAGGCTGGAGAGGCCGCCGGC
GAAGCCGACGTGAACGAGATCATGGACACTCCAACATCTGAAGGAAACCC
TCAGCAAAGCCCCGTCAGCAGCGGCAGCGGCAGCGACGGCGACGGCGACT
GTAGTGGTAACGGTAGCGGTAAGGTCGCTTTGCCCGAACTCTGCGAGCTG
TGCGGCAAGCGCTACAAGACGCCGCAGGCGTTGCGGACGCACACGCGGCA
GCTCCACGAGCTGGGCCAGGAGGGCGGCAAGCCCTTGGCCCCGAGAAAGG
AGGAGCCCTGTCCCCACTCGGGCTGCGGCCGCGTTTTCACGAGCGACAGG
GCGCTCGAGCAGCACGTCTCCGCCAAGCACGGGGGCGGTGGAAACGTCGA
CATCAAGCCGGACTGGTTCGAGGAGACGATCTACCTGCTCCAACCACCGC
CGGCCCCGGCGTCTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGT
GGTGGTGGTGGTTGTGAAGATGGTGGTGGTGGTGGTGGTGACGATGGTAG
TGGTGGTGGTAGTGGTGATAGTGATGGTGACGCCGTCGGGGAGCGGCTGG
AGAATGTTTTCATAGGTTCTCGCGAGGAGTGCGACGTGCCCCGAGGGGAA
GGGCTGGCAGTGGACCACGCGGAGGCGGAGGAGGGAGTGGACGATGTATG
GCACTGCGTAATCTGCGGGTTTTGGTTCTCGACGGCGGGGAACGCACGGC
GCCATCTCGACAACCTTCGCCCGCCGATAGAGGGCGCGGTGACCGTGCAC
GAGTGCGCCACGTGCCTGAAGGACTTCGGGTCGAGGAGGGCGCTGCTCCA
GCACGCCAATTTTTGCGGGCGATAG
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