prot_H-elongata_contig18489.4987.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18489.4987.1
Unique Nameprot_H-elongata_contig18489.4987.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
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BLAST of mRNA_H-elongata_contig18489.4987.1 vs. uniprot
Match: D7G7E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E7_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 5.650e-18
Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 0 
Query:    5 KVLVQLRHVYGQDVGLFEEFSRELLAPLLRLVPSGLSPPGAVRLAAAALVSLRENSVACLLR 66
            +VLV+LRHVY  D  L+EEFSRELL+P+LRLVPS LS   AVRL++  +VSLREN VACL+R
Sbjct:   34 EVLVRLRHVYDHDAELYEEFSRELLSPVLRLVPSALSSLDAVRLSSRVVVSLRENCVACLVR 95
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18489.4987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7E7_ECTSI5.650e-1867.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18489contigH-elongata_contig18489:54..257 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18489.4987.1mRNA_H-elongata_contig18489.4987.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18489 54..257 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18489.4987.1 ID=prot_H-elongata_contig18489.4987.1|Name=mRNA_H-elongata_contig18489.4987.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
PAGGKVLVQLRHVYGQDVGLFEEFSRELLAPLLRLVPSGLSPPGAVRLAA
AALVSLRENSVACLLRHV
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