prot_H-elongata_contig18489.4988.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18489.4988.1
Unique Nameprot_H-elongata_contig18489.4988.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length259
Homology
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BLAST of mRNA_H-elongata_contig18489.4988.1 vs. uniprot
Match: D7FHF4_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF4_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 5.350e-11
Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = 0 
Query:  199 EKMEA-QAGLLRSLSMGLHPVLLVEPLTTVREVTKWYTLQLEKAFKHFKRRK 249
            EK EA +  LLR L++GLHPVLLVEPLTTVREVTKWYT+QLEK+FK ++ RK
Sbjct: 1127 EKAEAKEVDLLRKLAVGLHPVLLVEPLTTVREVTKWYTVQLEKSFKSYRHRK 1178
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BLAST of mRNA_H-elongata_contig18489.4988.1 vs. uniprot
Match: A0A6H5K1B4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B4_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.230e-6
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0 
Query:  207 LLRSLSMGLHPVLLVEPLTTVREVTKWYTLQLEKA 241
            LLR L++GLHPVLLVEPLTTVREVTKWYT+Q E+ 
Sbjct:  900 LLRKLAVGLHPVLLVEPLTTVREVTKWYTVQEEEG 934
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18489.4988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHF4_ECTSI5.350e-1173.08Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5K1B4_9PHAE2.230e-680.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18489contigH-elongata_contig18489:4082..5990 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18489.4988.1mRNA_H-elongata_contig18489.4988.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18489 4082..5990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18489.4988.1 ID=prot_H-elongata_contig18489.4988.1|Name=mRNA_H-elongata_contig18489.4988.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=259bp
LRPRSRIGSRTSGPNRHASSRSSKPRAGNCRIGTAILEDVKDEPLSSGSG
GHGSDHGSAAVSPSSAAAASATASLDVEASEKERSSEQRKAGGRGERIAT
PEEKRRDSRKSESGSNSASGGGSKEGGEACGTEGRDSSFPLDDPTSAATR
TSDVTKKDKNSLPRRCLSASLIGVSGLKFTMGAGKEAGAEEEEAAAAAEK
MEAQAGLLRSLSMGLHPVLLVEPLTTVREVTKWYTLQLEKAFKHFKRRKR
QEEESRFR*
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