prot_H-elongata_contig18485.4985.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18485.4985.1
Unique Nameprot_H-elongata_contig18485.4985.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length676
Homology
BLAST of mRNA_H-elongata_contig18485.4985.1 vs. uniprot
Match: D7FZT7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT7_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 8.360e-43
Identity = 202/604 (33.44%), Postives = 274/604 (45.36%), Query Frame = 0
Query:    9 KIDSFAARASSAEEKVFSATKLVRLAQTYSEEQGHEQARINDAFEDRLDDLERRL-IHSRGASQTETARRFPPERDECSSSHLRPS---PPDHPVSPGLPAISAAGLSDWMQGVDQQLEDLRERVASSQEDCEAPAVTKSDGDERSPHGGVTVQGGRREMEEEACSPSGETDATSSHQAQDQPRSVEPPAASELARLDERLRRLEEGASTVAASPDDDARQSLGCAPLSGEDTNDENETSHSARGRRAKISLELALGDSPRSPSSS--PI------PRPSLRESCSPVRTNVVDVATGAKSSPDSVIVEALEEGKAAARRASELAEEALKVGREAAARSERTEGLAKCLAAKSSKLAEDQRDQVNEALNRINEELQKNRGSSDGDEECRRLLANKAWEEERTTTPYREAAVGPEDCPRVATVVDGIDVKFTDSAVANRGASDSRPNRAHGRRHRTPTEVVPAPMQTQDPFPTGCRRGRSRPRVVADE--------CREPSNS-----RPARDIRSTVKRVTVNDVSR-RQVALGAAGTALESILRGASRQQAGHEADVSEAGKERGL---PAGSMMEGFSNGDSRKVDEMRQAIQGAVKILAGI 583
            +ID+  A+A++AE+KV SATKLVRLAQTYSEEQG EQ RIND  E RL+ LE+++   S        A+ +  +   C      PS   PP +P  P L  I+ AGLS+WM GVD+QLEDLR  V+       A   T S               G +       SP  E DA  +    +        A  E AR++ER+RRLEE     +A        S   +P +              RGRR +   ELA     RS S+S  P+      P PS   + +P+ +   D  T    + +  ++ A+E+G A ARRASE+AEEALK GREA  RSERTE LAK +A +S KLA+++  +V   L+R+ E++++      GD   RR          R  +       G          VD      T     + GA+  R  R      R      P           G  RG  R  +   E         ++P        R  R+IR  ++     D    R++ALGAA TALESILR AS    G   D     + R     P   +  G    + R+ DE+R+AI+GAV IL+GI
Sbjct:   63 RIDAATAKATAAEDKVMSATKLVRLAQTYSEEQGREQGRINDVMEIRLESLEQQIDAVSAAVDDAAMAQSYNLDVGTCMGDDGIPSARHPPVYP--PDLHEINTAGLSEWMTGVDKQLEDLRNLVS-------AQITTGS----XXXXXXXXXXXGSKATTAVGNSPQSENDAAEATAVPETKTEAVATARDECARIEERVRRLEEAIGETSAGAGHSGGDSSLLSPAT-------TVVDQRDRGRRLERCAELAREGLTRSRSASRSPVRRSPSAPPPSTEIAAAPLAS---DAGTLTVEADNDALLGAVEDGTAVARRASEVAEEALKAGREAIERSERTESLAKTIAVRSFKLAKERHKEVTTVLDRLGEDIRRK-----GDGTVRR----------RPRSAGESRGDG----------VDSARPAGTSGTTLSAGAAGGRRGRC-----RRAVSATPKERHRSAKARRGDARGFGRQALHDVEGATEQLAAAQDPGGGDTGTHRSVREIREILENSAFADSDNGRRIALGAARTALESILREASP---GRPPDCGTGRRPRAAQARPRAVLAGGDGGNEGRRADELREAIRGAVTILSGI 610          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18485.4985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZT7_ECTSI8.360e-4333.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 304..324
NoneNo IPR availableCOILSCoilCoilcoord: 115..135
NoneNo IPR availableCOILSCoilCoilcoord: 350..373

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18485contigH-elongata_contig18485:1301..5517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18485.4985.1mRNA_H-elongata_contig18485.4985.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18485 1270..6801 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18485.4985.1 ID=prot_H-elongata_contig18485.4985.1|Name=mRNA_H-elongata_contig18485.4985.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=676bp
MAAQECTAKIDSFAARASSAEEKVFSATKLVRLAQTYSEEQGHEQARIND
AFEDRLDDLERRLIHSRGASQTETARRFPPERDECSSSHLRPSPPDHPVS
PGLPAISAAGLSDWMQGVDQQLEDLRERVASSQEDCEAPAVTKSDGDERS
PHGGVTVQGGRREMEEEACSPSGETDATSSHQAQDQPRSVEPPAASELAR
LDERLRRLEEGASTVAASPDDDARQSLGCAPLSGEDTNDENETSHSARGR
RAKISLELALGDSPRSPSSSPIPRPSLRESCSPVRTNVVDVATGAKSSPD
SVIVEALEEGKAAARRASELAEEALKVGREAAARSERTEGLAKCLAAKSS
KLAEDQRDQVNEALNRINEELQKNRGSSDGDEECRRLLANKAWEEERTTT
PYREAAVGPEDCPRVATVVDGIDVKFTDSAVANRGASDSRPNRAHGRRHR
TPTEVVPAPMQTQDPFPTGCRRGRSRPRVVADECREPSNSRPARDIRSTV
KRVTVNDVSRRQVALGAAGTALESILRGASRQQAGHEADVSEAGKERGLP
AGSMMEGFSNGDSRKVDEMRQAIQGAVKILAGISRPYPSGERQRLPSRSA
RRVLRQGVRSSQSQERTKSSPVRDRDRSKHVGGYWVPPGSVPYKVGERRG
RMMSVRAPWDGREDEAGEETLASFS*
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