prot_H-elongata_contig184832.4984.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig184832.4984.1
Unique Nameprot_H-elongata_contig184832.4984.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length126
Homology
BLAST of mRNA_H-elongata_contig184832.4984.1 vs. uniprot
Match: D8LCE0_ECTSI (Glutamate synthase (NADH/NADPH-dependent), C-terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE0_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 8.970e-64
Identity = 111/123 (90.24%), Postives = 116/123 (94.31%), Query Frame = 0
Query:    3 VRGLLRFKTESSAAIPLEEVEPVSEVMKRFNTGAMSLGSISRETHETLAQAVNKIGGRSNTGEGGEDVERFGDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKVMK 125
            +RGLLRFK E S +IPLEEVEPV E+MKRFNTGAMSLGSISRETHETLAQAVN+IGGRSNTGEGGED ERF DNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPG+KV K
Sbjct:  615 LRGLLRFKDEPSLSIPLEEVEPVGEIMKRFNTGAMSLGSISRETHETLAQAVNEIGGRSNTGEGGEDAERFTDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGSKVTK 737          
BLAST of mRNA_H-elongata_contig184832.4984.1 vs. uniprot
Match: A0A6H5KZS8_9PHAE (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZS8_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 1.000e-62
Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0
Query:    3 VRGLLRFKTESSAAIPLEEVEPVSEVMKRFNTGAMSLGSISRETHETLAQAVNKIGGRSNTGEGGEDVERFGDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKV 123
            +RGLLRFK E S +IPLEEVEPV E+MKRFNTGAMSLGSISRETHETLAQAVN+IGGRSNTGEGGED ERF DNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPG+K 
Sbjct:  939 LRGLLRFKDEPSLSIPLEEVEPVGEIMKRFNTGAMSLGSISRETHETLAQAVNEIGGRSNTGEGGEDAERFTDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGSKA 1059          
BLAST of mRNA_H-elongata_contig184832.4984.1 vs. uniprot
Match: A0A835YLR4_9STRA (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR4_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.910e-59
Identity = 103/123 (83.74%), Postives = 115/123 (93.50%), Query Frame = 0
Query:    3 VRGLLRFKTESSAAIPLEEVEPVSEVMKRFNTGAMSLGSISRETHETLAQAVNKIGGRSNTGEGGEDVERFGDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKVMK 125
            +RGLLRFK++ +AAIP++EVEP +++MKRF TGAMSLGSISRETHETLA AVN IGGRSNTGEGGED ERF D+RRS+IKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKV +
Sbjct:  902 LRGLLRFKSDPAAAIPIDEVEPATQIMKRFCTGAMSLGSISRETHETLAIAVNTIGGRSNTGEGGEDPERFADSRRSSIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKVTR 1024          
BLAST of mRNA_H-elongata_contig184832.4984.1 vs. uniprot
Match: A0A7S0CFF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CFF7_9STRA)

HSP 1 Score: 195 bits (496), Expect = 6.370e-58
Identity = 99/121 (81.82%), Postives = 110/121 (90.91%), Query Frame = 0
Query:    3 VRGLLRFKTESSAAIPLEEVEPVSEVMKRFNTGAMSLGSISRETHETLAQAVNKIGGRSNTGEGGEDVERFGDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKV 123
            +RG L+FK + S A+PLEEVEPVS+++KRF TGAMSLGSIS+E HETLA A+N IGGRSNTGEGGED +RF DNRRS+IKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPG KV
Sbjct:  123 LRGQLKFKFDPSQAVPLEEVEPVSDIVKRFVTGAMSLGSISQEAHETLAVAMNSIGGRSNTGEGGEDPKRFLDNRRSSIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGFKV 243          
BLAST of mRNA_H-elongata_contig184832.4984.1 vs. uniprot
Match: K0TIB2_THAOC (Glu_synthase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIB2_THAOC)

HSP 1 Score: 189 bits (480), Expect = 2.450e-57
Identity = 94/121 (77.69%), Postives = 109/121 (90.08%), Query Frame = 0
Query:    3 VRGLLRFKTESSAAIPLEEVEPVSEVMKRFNTGAMSLGSISRETHETLAQAVNKIGGRSNTGEGGEDVERFGDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKV 123
            +RG L+F  + S ++PL+EVEPV +++KRF TGAMSLGSIS+E HETLA+A+N +GGRSNTGEGGED ERF DNRRS+IKQVASGRFGVTS+YLANSDQIQIKMAQGAKPGEGGELPG KV
Sbjct:    5 LRGQLKFTFDPSRSVPLDEVEPVQDIVKRFATGAMSLGSISQEAHETLAKAMNALGGRSNTGEGGEDPERFLDNRRSSIKQVASGRFGVTSHYLANSDQIQIKMAQGAKPGEGGELPGFKV 125          
BLAST of mRNA_H-elongata_contig184832.4984.1 vs. uniprot
Match: A0A7S2V0N1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0N1_9STRA)

HSP 1 Score: 197 bits (502), Expect = 3.270e-56
Identity = 98/121 (80.99%), Postives = 109/121 (90.08%), Query Frame = 0
Query:    3 VRGLLRFKTESSAAIPLEEVEPVSEVMKRFNTGAMSLGSISRETHETLAQAVNKIGGRSNTGEGGEDVERFGDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKV 123
            +RGLL+FKTE    +P+EEVE  ++++KRFNTGAMSLGSIS+ETHE LA A+NKIGGRSNTGEGGED  RF DNRRSAIKQVASGRFGVTS+YLANSDQIQIKMAQGAKPGEGGELPG KV
Sbjct:  937 LRGLLKFKTEGVKPVPIEEVESAADIVKRFNTGAMSLGSISQETHEALAMAMNKIGGRSNTGEGGEDPARFEDNRRSAIKQVASGRFGVTSHYLANSDQIQIKMAQGAKPGEGGELPGQKV 1057          
BLAST of mRNA_H-elongata_contig184832.4984.1 vs. uniprot
Match: A0A7S1ZND1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZND1_TRICV)

HSP 1 Score: 194 bits (493), Expect = 3.480e-56
Identity = 98/121 (80.99%), Postives = 110/121 (90.91%), Query Frame = 0
Query:    3 VRGLLRFKTESSAAIPLEEVEPVSEVMKRFNTGAMSLGSISRETHETLAQAVNKIGGRSNTGEGGEDVERFGDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKV 123
            +RG L+FK + S +IPL+EVEPVSE++KRF TGAMSLGSIS+E HETLA A+N +GGRSNTGEGGED +RF DNRRSAIKQVASGRFGVTS+YLANSDQIQIKMAQGAKPGEGGELPG KV
Sbjct:  227 LRGQLKFKFDPSKSIPLDEVEPVSEIVKRFATGAMSLGSISQEAHETLAVAMNSLGGRSNTGEGGEDPKRFTDNRRSAIKQVASGRFGVTSHYLANSDQIQIKMAQGAKPGEGGELPGFKV 347          
BLAST of mRNA_H-elongata_contig184832.4984.1 vs. uniprot
Match: A0A448ZBQ4_9STRA (Glutamine amidotransferase type-2 domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZBQ4_9STRA)

HSP 1 Score: 197 bits (500), Expect = 6.060e-56
Identity = 100/121 (82.64%), Postives = 110/121 (90.91%), Query Frame = 0
Query:    3 VRGLLRFKTESSAAIPLEEVEPVSEVMKRFNTGAMSLGSISRETHETLAQAVNKIGGRSNTGEGGEDVERFGDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKV 123
            +RG L+FK + S AIPLEEVEPVSE++KRF TGAMSLGSIS+E HETLA A+N +GGRSNTGEGGED +RF DNRRS+IKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPG KV
Sbjct:  809 LRGQLKFKYDPSKAIPLEEVEPVSEIVKRFATGAMSLGSISQEAHETLAVAMNTLGGRSNTGEGGEDPKRFTDNRRSSIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGFKV 929          
BLAST of mRNA_H-elongata_contig184832.4984.1 vs. uniprot
Match: A0A482SZM0_9ARCH (Glutamate synthase large subunit n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZM0_9ARCH)

HSP 1 Score: 195 bits (495), Expect = 1.760e-55
Identity = 96/121 (79.34%), Postives = 110/121 (90.91%), Query Frame = 0
Query:    3 VRGLLRFKTESSAAIPLEEVEPVSEVMKRFNTGAMSLGSISRETHETLAQAVNKIGGRSNTGEGGEDVERFGDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKV 123
            +RG+L+ K + S +IPL EVEP  E++KRFNTGAMSLGSIS+ETHE+LA A+N+IG RSNTGEGGED +RF DNRRSAIKQVASGRFGVTS+YLANSDQ+QIKMAQGAKPGEGGELPGNKV
Sbjct:  268 LRGVLKLKVDKSKSIPLSEVEPAKEIVKRFNTGAMSLGSISQETHESLAVAMNQIGARSNTGEGGEDSKRFLDNRRSAIKQVASGRFGVTSHYLANSDQVQIKMAQGAKPGEGGELPGNKV 388          
BLAST of mRNA_H-elongata_contig184832.4984.1 vs. uniprot
Match: A0A1E7FRF6_9STRA (Glutamate synthase [NADPH] large chain n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRF6_9STRA)

HSP 1 Score: 195 bits (496), Expect = 2.100e-55
Identity = 99/121 (81.82%), Postives = 109/121 (90.08%), Query Frame = 0
Query:    3 VRGLLRFKTESSAAIPLEEVEPVSEVMKRFNTGAMSLGSISRETHETLAQAVNKIGGRSNTGEGGEDVERFGDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKV 123
            +RG L+FK   S AIPL+EVEPVSE++KRF TGAMSLGSIS+E HETLA A+N +GGRSNTGEGGED +RF DNRRS+IKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPG KV
Sbjct:  852 LRGQLKFKFAPSKAIPLDEVEPVSEIVKRFATGAMSLGSISQEAHETLAVAMNTLGGRSNTGEGGEDPKRFADNRRSSIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGFKV 972          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig184832.4984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCE0_ECTSI8.970e-6490.24Glutamate synthase (NADH/NADPH-dependent), C-termi... [more]
A0A6H5KZS8_9PHAE1.000e-6290.08Glutamine amidotransferase type-2 domain-containin... [more]
A0A835YLR4_9STRA1.910e-5983.74Glutamine amidotransferase type-2 domain-containin... [more]
A0A7S0CFF7_9STRA6.370e-5881.82Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
K0TIB2_THAOC2.450e-5777.69Glu_synthase domain-containing protein n=1 Tax=Tha... [more]
A0A7S2V0N1_9STRA3.270e-5680.99Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1ZND1_TRICV3.480e-5680.99Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A448ZBQ4_9STRA6.060e-5682.64Glutamine amidotransferase type-2 domain-containin... [more]
A0A482SZM0_9ARCH1.760e-5579.34Glutamate synthase large subunit n=1 Tax=archaeon ... [more]
A0A1E7FRF6_9STRA2.100e-5581.82Glutamate synthase [NADPH] large chain n=1 Tax=Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002932Glutamate synthase domainPFAMPF01645Glu_synthasecoord: 4..124
e-value: 2.5E-48
score: 165.1
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 3..124
e-value: 1.9E-60
score: 206.7
NoneNo IPR availablePANTHERPTHR11938:SF132coord: 2..124
NoneNo IPR availablePANTHERPTHR11938FAD NADPH DEHYDROGENASE/OXIDOREDUCTASEcoord: 2..124
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 4..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig184832contigH-elongata_contig184832:264..1180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig184832.4984.1mRNA_H-elongata_contig184832.4984.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig184832 264..1180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig184832.4984.1 ID=prot_H-elongata_contig184832.4984.1|Name=mRNA_H-elongata_contig184832.4984.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp
FFVRGLLRFKTESSAAIPLEEVEPVSEVMKRFNTGAMSLGSISRETHETL
AQAVNKIGGRSNTGEGGEDVERFGDNRRSAIKQVASGRFGVTSNYLANSD
QIQIKMAQGAKPGEGGELPGNKVMK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002932Glu_synthdom
IPR013785Aldolase_TIM