prot_H-elongata_contig184411.4974.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig184411.4974.1
Unique Name	prot_H-elongata_contig184411.4974.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	114

Homology

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BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot
Match: D7FN93_ECTSI (Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN93_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 9.500e-42
Identity = 74/114 (64.91%), Postives = 90/114 (78.95%), Query Frame = 0

Query:    1 QQEGGRIVVFRGNPAARIMMIGEAPGAEEDKLGKPFVGRSGQLLDKILLAAGLDPQRDVYSLMSQCSRVRWRSNIVRRRPANNRTPTSEELEFYLPMLLEEIRLVDPDIIVTLG 114
            +++GGR+VVFRG+P+A +M+IGEAPGAEED+LG PFVGRSGQLLD +L A G DP+R+VY            SNIVRRRP +NRTPT EE++FYLP LLEEI LVDP +IV LG
Sbjct:  155 EEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYV-----------SNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLG 257

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BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot
Match: A0A835YMS9_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS9_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.650e-37
Identity = 69/111 (62.16%), Postives = 83/111 (74.77%), Query Frame = 0

Query:    4 GGRIVVFRGNPAARIMMIGEAPGAEEDKLGKPFVGRSGQLLDKILLAAGLDPQRDVYSLMSQCSRVRWRSNIVRRRPANNRTPTSEELEFYLPMLLEEIRLVDPDIIVTLG 114
            GGRIVV+RG+P A++M++GEAPGA ED+ GKPFVGRSGQLLD IL AAG DP+ D+Y            SNIVRRRP  NR PT+ E+ +Y P LLEEIRLV+P II+T G
Sbjct:   79 GGRIVVYRGDPQAKLMVVGEAPGAMEDETGKPFVGRSGQLLDAILKAAGFDPETDLYV-----------SNIVRRRPPENRDPTTAEIAYYRPWLLEEIRLVNPAIIITTG 178

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BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot
Match: A0A3M1EZS2_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EZS2_9CHLR)

HSP 1 Score: 134 bits (337), Expect = 3.200e-37
Identity = 67/111 (60.36%), Postives = 80/111 (72.07%), Query Frame = 0

Query:    4 GGRIVVFRGNPAARIMMIGEAPGAEEDKLGKPFVGRSGQLLDKILLAAGLDPQRDVYSLMSQCSRVRWRSNIVRRRPANNRTPTSEELEFYLPMLLEEIRLVDPDIIVTLG 114
            GG +V++RGNPAA++M+IGE PGAEED+L KPFVGRSGQLLDKIL A   DP+ DVY            +N+V+RRP  NR PT EE+ FY P L EEIRLVDP II+  G
Sbjct:   49 GGNMVIYRGNPAAKLMVIGEGPGAEEDRLRKPFVGRSGQLLDKILRAVHFDPETDVYI-----------TNVVKRRPPENRDPTPEEINFYAPYLFEEIRLVDPKIIMLTG 148

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BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot
Match: A0A7C3BN30_9CHLR (Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7C3BN30_9CHLR)

HSP 1 Score: 129 bits (325), Expect = 1.200e-35
Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 0

Query:    1 QQEGGRIVVFRGNPAARIMMIGEAPGAEEDKLGKPFVGRSGQLLDKILLAAGLDPQRDVYSLMSQCSRVRWRSNIVRRRPANNRTPTSEELEFYLPMLLEEIRLVDPDIIVTLG 114
            +Q GG IV++RGNPAA++M+IGE PGA ED+L KPFVGRSG+LLD+IL A   +P++DVY            SN+VRRRP  NR P  +E+ FY P L EEIRL+DP II+ +G
Sbjct:   27 EQWGGNIVIYRGNPAAKLMIIGEGPGANEDRLRKPFVGRSGKLLDQILSAVNFNPEQDVYI-----------SNVVRRRPPKNRDPLPKEIAFYAPYLFEEIRLLDPKIILLIG 129

[Close]

BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot
Match: A0A7S2V4W6_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4W6_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.020e-35
Identity = 67/113 (59.29%), Postives = 81/113 (71.68%), Query Frame = 0

Query:    4 GGRIVVFRGNPAARIMMIGEAPGAEEDKLGKPFVGRSGQLLDKILLAAGLD--PQRDVYSLMSQCSRVRWRSNIVRRRPANNRTPTSEELEFYLPMLLEEIRLVDPDIIVTLG 114
            GG +VVFRGNP  R+M++GEAPG EEDK   PFVG++GQLL+K+L  AG D  PQ +VY            +N+V+RRP NNR PT EE+ FYLP+L EEIRLVDPDIIV  G
Sbjct:   79 GGSVVVFRGNPRGRVMVVGEAPGEEEDKQKLPFVGKAGQLLEKMLTEAGFDTGPQGEVYI-----------TNLVKRRPPNNRNPTPEEVSFYLPLLQEEIRLVDPDIIVCAG 180

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BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot
Match: A0A7S3A2Z9_9RHOD (Type-4 uracil-DNA glycosylase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A2Z9_9RHOD)

HSP 1 Score: 127 bits (318), Expect = 2.890e-34
Identity = 63/112 (56.25%), Postives = 81/112 (72.32%), Query Frame = 0

Query:    3 EGGRIVVFRGNPAARIMMIGEAPGAEEDKLGKPFVGRSGQLLDKILLAAGLDPQRDVYSLMSQCSRVRWRSNIVRRRPANNRTPTSEELEFYLPMLLEEIRLVDPDIIVTLG 114
            +GGRIV +RGNP A++M++GE PG +ED  GKPFVGRSG+LLDKIL +  LDP+ DVY            +N V+RRP +NR PT +E+E+YLP L EE+RLVDP +IV  G
Sbjct:   54 DGGRIVHYRGNPRAKLMVVGEGPGEQEDIEGKPFVGRSGKLLDKILRSVELDPEEDVYV-----------TNTVKRRPKDNRDPTRDEIEWYLPYLSEEVRLVDPHVIVCSG 154

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BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot
Match: A0A1W9W486_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineaceae bacterium 4572_78 TaxID=1972460 RepID=A0A1W9W486_9CHLR)

HSP 1 Score: 124 bits (312), Expect = 1.340e-33
Identity = 63/114 (55.26%), Postives = 78/114 (68.42%), Query Frame = 0

Query:    1 QQEGGRIVVFRGNPAARIMMIGEAPGAEEDKLGKPFVGRSGQLLDKILLAAGLDPQRDVYSLMSQCSRVRWRSNIVRRRPANNRTPTSEELEFYLPMLLEEIRLVDPDIIVTLG 114
            +  G  +V++RG P A +M+IGEAPGAEEDK+GKPFVGRSGQLLDKIL A   + + D+Y            +N ++RRP NNR P  EELE+Y P L EEIRLVDP II+  G
Sbjct:   31 ESTGSNMVIYRGYPKADLMIIGEAPGAEEDKIGKPFVGRSGQLLDKILQAVHFNIETDIYI-----------TNTLKRRPPNNRNPKQEELEYYFPFLAEEIRLVDPKIILLAG 133

[Close]

BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot
Match: A0A7C3CIK3_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3CIK3_9CHLR)

HSP 1 Score: 124 bits (312), Expect = 1.530e-33
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 0

Query:    4 GGRIVVFRGNPAARIMMIGEAPGAEEDKLGKPFVGRSGQLLDKILLAAGLDPQRDVYSLMSQCSRVRWRSNIVRRRPANNRTPTSEELEFYLPMLLEEIRLVDPDIIVTLG 114
            G R+V++RGNP A ++++GE PGA ED+LGKP+VGRSGQLLDKIL AAG D Q  VY            +N V RRP +NR PT  EL+FYLP LLE IR+VDP +I+  G
Sbjct:   34 GNRMVIYRGNPQADLLIVGEGPGANEDRLGKPYVGRSGQLLDKILEAAGFDSQNGVYV-----------TNTVFRRPPDNRDPTQAELDFYLPYLLELIRIVDPKVILLTG 133

[Close]

BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot
Match: A0A7S2S1J0_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1J0_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.760e-33
Identity = 61/114 (53.51%), Postives = 84/114 (73.68%), Query Frame = 0

Query:    1 QQEGGRIVVFRGNPAARIMMIGEAPGAEEDKLGKPFVGRSGQLLDKILLAAGLDPQRDVYSLMSQCSRVRWRSNIVRRRPANNRTPTSEELEFYLPMLLEEIRLVDPDIIVTLG 114
            ++ GGR+V +RGNP A+++++GEAPGA ED+LG P+VGR+G+LLD+IL AAG D + DVY            +N+V+RRP  NR PT+ EL +Y P+LLEE+RLVDP I+V  G
Sbjct:   44 EEFGGRVVHYRGNPGAKVVVVGEAPGATEDELGVPYVGRAGKLLDQILTAAGFDVEEDVYF-----------TNVVKRRPPENRDPTAAELRYYSPLLLEELRLVDPWIVVCTG 146

[Close]

BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot
Match: A0A3A0G0K9_9BACT (Type-4 uracil-DNA glycosylase (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A3A0G0K9_9BACT)

HSP 1 Score: 118 bits (296), Expect = 3.360e-31
Identity = 64/108 (59.26%), Postives = 75/108 (69.44%), Query Frame = 0

Query:    7 IVVFRGNPAARIMMIGEAPGAEEDKLGKPFVGRSGQLLDKILLAAGLDPQRDVYSLMSQCSRVRWRSNIVRRRPANNRTPTSEELEFYLPMLLEEIRLVDPDIIVTLG 114
            +V+FRGNPAAR+M+IGEAPGAEED   KPFVG SGQLLD+IL +  LDP  DV             +N V RRP NNR PT EE+ +Y P LLE IRLVDP II+ +G
Sbjct:   56 VVIFRGNPAARLMLIGEAPGAEEDIQRKPFVGPSGQLLDQILRSVDLDPATDVIV-----------TNAVFRRPPNNRVPTPEEIAWYRPFLLEIIRLVDPAIILLVG 152

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot

BLAST of mRNA_H-elongata_contig184411.4974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FN93_ECTSI	9.500e-42	64.91	Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus s...	[more]
A0A835YMS9_9STRA	2.650e-37	62.16	Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema mi...	[more]
A0A3M1EZS2_9CHLR	3.200e-37	60.36	Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae ...	[more]
A0A7C3BN30_9CHLR	1.200e-35	56.14	Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi ...	[more]
A0A7S2V4W6_9STRA	3.020e-35	59.29	Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa j...	[more]
A0A7S3A2Z9_9RHOD	2.890e-34	56.25	Type-4 uracil-DNA glycosylase n=1 Tax=Rhodosorus m...	[more]
A0A1W9W486_9CHLR	1.340e-33	55.26	Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineac...	[more]
A0A7C3CIK3_9CHLR	1.530e-33	56.76	Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae...	[more]
A0A7S2S1J0_9STRA	1.760e-33	53.51	Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromul...	[more]
A0A3A0G0K9_9BACT	3.360e-31	59.26	Type-4 uracil-DNA glycosylase (Fragment) n=1 Tax=b...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00987	UDG_2_a	coord: 9..114 e-value: 6.1E-5 score: 32.4
None	No IPR available	PANTHER	PTHR33693	FAMILY NOT NAMED	coord: 6..114
None	No IPR available	PANTHER	PTHR33693:SF1		coord: 6..114
IPR005122	Uracil-DNA glycosylase-like	SMART	SM00986	UDG_2	coord: 9..114 e-value: 6.1E-5 score: 32.4
IPR005122	Uracil-DNA glycosylase-like	PFAM	PF03167	UDG	coord: 11..114 e-value: 8.0E-23 score: 81.1
IPR036895	Uracil-DNA glycosylase-like domain superfamily	GENE3D	3.40.470.10		coord: 1..114 e-value: 2.6E-33 score: 116.9
IPR036895	Uracil-DNA glycosylase-like domain superfamily	SUPERFAMILY	52141	Uracil-DNA glycosylase-like	coord: 5..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig184411	contig	H-elongata_contig184411:581..1071 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig184411.4974.1	mRNA_H-elongata_contig184411.4974.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig184411 581..1071 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig184411.4974.1 ID=prot_H-elongata_contig184411.4974.1|Name=mRNA_H-elongata_contig184411.4974.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
QQEGGRIVVFRGNPAARIMMIGEAPGAEEDKLGKPFVGRSGQLLDKILLA
AGLDPQRDVYSLMSQCSRVRWRSNIVRRRPANNRTPTSEELEFYLPMLLE
EIRLVDPDIIVTLG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005122	Uracil-DNA_glycosylase-like
IPR036895	Uracil-DNA_glycosylase-like_sf