mRNA_H-elongata_contig184402.4973.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig184402.4973.1
Unique NamemRNA_H-elongata_contig184402.4973.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1)

HSP 1 Score: 258 bits (660), Expect = 2.140e-80
Identity = 145/339 (42.77%), Postives = 205/339 (60.47%), Query Frame = 1
Query:   43 LRNVPLKLRTTQRSVSNAVGLPKTTFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVSPSTVPGRPRRFKGMVNVVHVDEKWFFVCKDKQT*YVLDEEPDPGRKVQHRSHILMAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIE-FTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV*LSLQVCLEQIMLTGGDNRSKLPHLNKGRLETAGTLPWQLECKEE 1056
            ++ VPL  R+T RS++ A+ + KTT HR +++  ++     +KP LT+  K  RL +    + P T+      F  M NVVH+DEKWF++CK     Y++ +EP+P R+V+ +  I  AM L AVARPR        F GKIGI+PFT    A+++S+NR AGTMVTK  E  TKE  K  LI++VIP I   +P+         R + +QQDNA+PH+  N+ E   A   DG+ IR++ QP NSPD N+LDL FF SIQ LQ    P  ++ L+  VK +++E     LNRV L+ Q C+++IM   GDN  K+PH+ K RLE  GTLP Q+ C+ +
Sbjct:   28 IKQVPLNRRSTVRSLAKAISVSKTTVHRRVQEGLIRPHTNAVKPTLTEDNKRTRLEFCLSQIDPDTL-----LFSDMFNVVHIDEKWFYMCKTTTKYYLVHDEPEPTRRVKSKRFITKAMFLAAVARPRNG------FSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQ-------GMRTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQIRCESD 348          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: A0A834FTG5_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FTG5_RHOSS)

HSP 1 Score: 257 bits (657), Expect = 3.790e-79
Identity = 141/337 (41.84%), Postives = 211/337 (62.61%), Query Frame = 1
Query:   43 LRNVPLKLRTTQRSVSNAVGLPKTTFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVSPSTVPGRPRRFKGMVNVVHVDEKWFFVCKDKQT*YVLDEEPDPGRKVQHRSHILMAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTI-EFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV*LSLQVCLEQIMLTGGDNRSKLPHLNKGRLETAGTLPWQLECK 1050
            +R++    RT  RS++ A+ +PKTT HR +K+  ++     LKP L++Q K  RL++    + PS    +PR+FK M N VH+DEKWF++ K+ ++ Y+L EE +P R  + +  I   M L AVARPR + + N +F GKIGI+PF  +  A++SS+NR AGT+ TK I   TK+  +  LI++V+P I+  +P  P SA      +++QQDNA+PH+   D +   A   DG+ IR+ NQP +SPD N+LDL +F +IQ LQ +  PK +D L+  V+ ++EE S   LNRV +SLQ C+ ++M     N  KLPH+ K +L  +  LP QLEC+
Sbjct:   67 MRDIDRARRTNIRSLAAAMKVPKTTIHRRIKEGKIRPHSNALKPYLSEQAKKARLQFCLSMLEPSEDESQPRKFKSMYNYVHIDEKWFYMTKEAESYYLLPEEEEPHRTCKSKRFIPKVMFLAAVARPRFDANQNEEFSGKIGIFPFVFKEPARRSSKNRPAGTLETKAILSVTKDIIRSCLINQVLPAIQSKWP--PSSAH---ETIFIQQDNAKPHIQPFDLQFVEAATKDGFDIRLSNQPPSSPDMNVLDLGYFRAIQSLQHQEAPKTIDELVNAVEKSFEELSVDSLNRVFVSLQACMVEVMKVHEGNNYKLPHIGKNQLIRSAMLPSQLECE 398          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: UPI000B4246FA (uncharacterized protein LOC110435039 n=1 Tax=Sorghum bicolor TaxID=4558 RepID=UPI000B4246FA)

HSP 1 Score: 251 bits (642), Expect = 2.390e-77
Identity = 145/359 (40.39%), Postives = 209/359 (58.22%), Query Frame = 1
Query:    7 GLPRDIASYKEA------------LRNVPLKLRTTQRSVSNAVGLPKTTFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVSPSTVPGRPRRFKGMVNVVHVDEKWFFVCKDKQT*YVLDEEPDPGRKVQHRSHILMAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIEFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV*LSLQVCLEQIMLTGGDNRSKLPHLNKGRLETAGTLPWQLEC 1047
            G+P D+ S ++             + N+PL  R T RS++NA+G+ K+T H+  K+  ++     LKPLLT+  K DRLRW    +   T+P  P+ F  M N++H+DEKWF         Y+L EE DP R V +++ I   M L AV RP  + + N  FDGK+G++PF  + +A++ SRNR  G  VTK I+  + + +  LI +V+  I R +PR     +     +++QQDNA  H+  ND E   A+   G  IR++NQPANS D N+LDL FFNS+Q L      +N+D+LI  V+  +E   P  LNRV L+LQ CL ++M  GG NR K+PH++K RLE+ G LP  L C
Sbjct:   23 GIPVDVRSQRKNCGHKRIQIDLSDVLNIPLHRRRTIRSLANAIGVKKSTLHKWFKEGLLRRHSSTLKPLLTEDNKKDRLRWCVSMLDRRTLPHEPK-FMDMYNIIHMDEKWFNTTSKYMKYYMLPEEEDPHRIVHNKNRIGKVMFLSAVGRPIYDDAGNCIFDGKLGVWPFVRKEQARRKSRNRGRGAEVTKPIKVDRSTMRSYLISKVLDAIVRRWPREHAGTT-----IYIQQDNAPSHVPINDEEFATAVKQTGLDIRLINQPANSLDLNVLDLGFFNSLQSLTYDRISRNLDDLIVNVEHEFENYDPDTLNRVFLTLQGCLIEVMKDGGGNRYKIPHIDKDRLESLGMLPRSLGC 375          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: A0A834HDF7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HDF7_RHOSS)

HSP 1 Score: 253 bits (646), Expect = 2.550e-77
Identity = 142/336 (42.26%), Postives = 202/336 (60.12%), Query Frame = 1
Query:   52 VPLKLRTTQRSVSNAVGLPKTTFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVSPSTVPGRPRRFKGMVNVVHVDEKWFFVCKDKQT*YVLDEEPDPGRKVQHRSHILMAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTI-EFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV*LSLQVCLEQIMLTGGDNRSKLPHLNKGRLETAGTLPWQLECKEE 1056
            VPL+ RT+ RS++ AV +P+TT  R +K+  ++     +KP LT++GK  RLR+    + PS++   P  FK M N VH+DEKWFF+ ++ +  Y+L  E +P R  + +  I   M L AVARPR +   N +F GKIGI+PFT +  A++SS+N  AGT+ TK I   TKE  +  LID+V+P I+  +P            +++QQDNA+PH+   D E   A   DG+ IR+  QP NSPD N+LDL +FNSIQ LQ +  P  +D L+  V+ ++E  +P  LN + LSLQ C+ +IM   G N  K PHL K +L  +G LP  L C  E
Sbjct:  100 VPLRRRTSIRSLAKAVTVPQTTLFRRIKEGDIRPHTIAVKPHLTEEGKKARLRFCFSMLEPSSLANDPV-FKNMYNYVHIDEKWFFLSREVERYYLLPREREPLRTCKSKRFITKVMFLAAVARPRFDAFRNEEFSGKIGIFPFTFKEPAKRSSKNCVAGTLETKAITSVTKEIMRSCLIDKVLPAIRAKWPH-----YDSTETIFIQQDNAKPHIHQLDSEFVQAARKDGFDIRLSFQPPNSPDLNVLDLRYFNSIQSLQHQEAPTTIDELVAAVEKSFENLAPQSLNEIFLSLQACMIEIMKVDGGNHYKQPHLGKNKLMRSGNLPTHLSCDRE 429          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08)

HSP 1 Score: 252 bits (644), Expect = 7.240e-77
Identity = 144/342 (42.11%), Postives = 210/342 (61.40%), Query Frame = 1
Query:   34 KEALRNVPLKLRTTQRSVSNAVGLPKTTFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVSPSTVPGRPRRFKGMVNVVHVDEKWFFVCKDKQT*YVLDEEPDPGRKVQHRSHILMAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIE-FTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV*LSLQVCLEQIMLTGGDNRSKLPHLNKGRLETAGTLPWQLECKEE 1056
            ++ +RN+ +  R++ R+++  + + KTT H  +K+  ++     +KP LT+  K+ RL+W    + PS   G+   F GM N+VH+DEKWF++ K     Y+L +E +P R  + + +I   M + AV+RP+ ++     +DGK+GI+PFT  V AQ+ S+NR  GT+ TK I    KE  +  +I ++IP IK  +P     AS E   +++QQDNA PH+   DPE  A   SDG+ I ++ QP NSPDTNILDL FF +IQ LQ +   +NVD L++ V  A+EE +P  LNRV LSLQ CL QI+   GDN  K+PH+NK RLE  G LP  LE  E+
Sbjct:   88 EDKVRNLSILQRSSIRTMACNLSVSKTTIHNWIKQDKLRPHTNAIKPALTELNKLARLKWCLTQLQPSITQGKVH-FHGMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPD---WASKE---IYIQQDNATPHITATDPEFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTGGLPNVLEVDED 422          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: UPI00053F3BA8 (uncharacterized protein LOC104908869 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F3BA8)

HSP 1 Score: 249 bits (637), Expect = 7.490e-77
Identity = 141/340 (41.47%), Postives = 207/340 (60.88%), Query Frame = 1
Query:   40 ALRNVPLKLRTTQRSVSNAVGLPKTTFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVSPSTVPGRPRRFKGMVNVVHVDEKWFFVCKDKQT*YVLDEEPDPGRKVQHRSHILMAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTI-EFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV*LSLQVCLEQIMLTGGDNRSKLPHLNKGRLETAGTLPWQLECKEE 1056
            AL  +PL+ RTT RS + A+G+  +T +R MK+  ++     +KP LT+  K+ R+ W    + P+T+   P+ F  M N++H+DEKWF + +  Q  Y+   E  P R  + +  I+  M  G ++RP   +   S +DGKIGIYPF  +V A++ S NR AGT+ TK I   TKE  ++ LI  VIP IK+ +P  P +     + +W+QQDNARPH+ + D +   A  SDG+ +R++NQPA SPD N+LDL FFN+IQ L+D+  PK VD LIKVV+ A++E  P + NR+ LSLQ C+ +++   G+N    PH+ K R+E  G LP   E   E
Sbjct:   30 ALMTIPLRERTTLRSTAAALGMHNSTLYRLMKRGALRKHTNTMKPHLTQSHKLARVLWCLNAIIPATLNTIPK-FSHMYNMIHIDEKWFCMSRIMQRYYLGPTEKAPHRTCKSKRFIVKVMFEGVMSRPHITSEGVSIWDGKIGIYPFVDKVPAKRRSNNREAGTLETKPITSITKEVMRQKLIQSVIPAIKQKWP--PYAC----KDIWIQQDNARPHIDSTDADFIEAATSDGFNMRLVNQPAQSPDLNVLDLGFFNAIQSLKDQKAPKTVDKLIKVVQAAYDEYDPKLGNRIFLSLQYCMIEVLKLKGNNNYNPPHVGKQRMEREGVLPISAEIPRE 362          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: A0A834FW95_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FW95_RHOSS)

HSP 1 Score: 252 bits (643), Expect = 8.000e-77
Identity = 139/336 (41.37%), Postives = 206/336 (61.31%), Query Frame = 1
Query:   43 LRNVPLKLRTTQRSVSNAVGLPKTTFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVSPSTVPGRPRRFKGMVNVVHVDEKWFFVCKDKQT*YVLDEEPDPGRKVQHRSHILMAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIE-FTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV*LSLQVCLEQIMLTGGDNRSKLPHLNKGRLETAGTLPWQLEC 1047
            +R +    RT  RS S A+ +PK+T H+ +K+  ++     LKP L+ Q KI RL +    + P+++  +P  FK M N VH+DEKWF++ K+ +  YVL +E  P R  + +  I   M L AVARPR   +   +F GKIGI+PFT +  A+++S+NR AGTM TK +   TK+  +  LI++VIP I+  + +  V  +     +++QQDNARPH+  ND E   A   +G+ IR+ NQPANSPD N+LDL FFN+IQ LQ +  P+ +D L+  V+ ++++     L+ V LSLQ C+ ++M   G N  KLPH+ K +L   G LP+QLEC
Sbjct:   98 VRGIAFHRRTNIRSFSEALEVPKSTLHQRIKEGEIRPHTNPLKPNLSDQNKIARLHFCLSMLEPNSLQTQPM-FKAMYNYVHIDEKWFYMTKESERYYVLPDEDQPHRTCKSKRFITKVMFLAAVARPRFGANGCEEFSGKIGIFPFTVKEPAKRTSKNRLAGTMETKAVAAVTKDVIRSYLIEKVIPAIQSKWHQSSVGET-----IYIQQDNARPHIKPNDVEFHEAATRNGFDIRLTNQPANSPDLNVLDLGFFNAIQSLQHQEAPRTIDQLVNAVEKSFDKLPSRELDSVFLSLQACMVEVMKVNGGNNYKLPHIKKPQLRRDGVLPFQLEC 427          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: A0A6P6VBP7_COFAR (uncharacterized protein LOC113715216 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6VBP7_COFAR)

HSP 1 Score: 248 bits (633), Expect = 1.370e-76
Identity = 140/336 (41.67%), Postives = 206/336 (61.31%), Query Frame = 1
Query:   52 VPLKLRTTQRSVSNAVGLPKTTFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVSPSTVPGRPRRFKGMVNVVHVDEKWFFVCKDKQT*YVLDEEPDPGRKVQHRSHILMAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTI-EFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV*LSLQVCLEQIMLTGGDNRSKLPHLNKGRLETAGTLPWQLECKEE 1056
            +PL+ RT  RS+S  + + K+T HR +K+  +K     LKP LT   K+ RL++    +   ++   P  F+ M N+VH+DEKWF++ K+ +  Y+  EE  P R  + +  I+  M L AVARPR + S N  FDGKIGI+PF  +  A+++S+NR AGT+ TK I   TKE Y+R LID V+P I+  +P+  V  SP    +++QQDNA+PH+   D E   A   +G+ IR+  QP NSPD N+LDL +F +IQ LQ +  P ++D LI  V+ +++E S   LN V L+LQ+C+ ++M   G N  K+PH+ K RL   G LP Q+ C +E
Sbjct:    3 IPLRCRTNIRSLSTKMKVAKSTLHRRIKEGVIKAHSNALKPHLTDDNKLVRLKFCLSMLQQESLNDAPI-FENMFNMVHIDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDV-ISP----IFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIRDGNLPLQIGCDKE 332          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: UPI00125DF384 (uncharacterized protein LOC116015901 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF384)

HSP 1 Score: 248 bits (634), Expect = 6.700e-76
Identity = 141/336 (41.96%), Postives = 208/336 (61.90%), Query Frame = 1
Query:   52 VPLKLRTTQRSVSNAVGLPKTTFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVSPSTVPGRPRRFKGMVNVVHVDEKWFFVCKDKQT*YVLDEEPDPGRKVQHRSHILMAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIE-FTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV*LSLQVCLEQIMLTGGDNRSKLPHLNKGRLETAGTLPWQLECKEE 1056
            +PL  RTT RS++ A+ + KT+ HR +K+  +K     +KPLLT++ +  RL++    +  ++ P  P  F  M + VH+DEKWFF+ K  Q  Y+L  E +P R  + +  I   M L AVARPR ++  N  FDGKIGI+PF ++  A++ S+NR AGT+VTK IE   KE  ++ LID V+P I+  +    +S+S   + +++QQDNARPH+  ND E   A   DG+ IR+  QP NSPD N+LDL FF +IQ LQ +  P+NVD L+   + A+++ S   L+ V L+LQ+C+ ++M   G N  K+PH+NK +LE  G LP  + C  E
Sbjct:   70 IPLNRRTTIRSMATALNMSKTSLHRRVKEGSLKSHSNAIKPLLTEENRKVRLQFCISMIDSNSPPHNPS-FIDMYDRVHIDEKWFFLSKSSQKYYLLPGEDEPYRTCKSKKFIAKVMFLCAVARPRFDSGRNEMFDGKIGIFPFIYKEAAKRRSKNREAGTLVTKPIESVNKEVTRKWLIDYVLPAIRAKWS---LSSS---KSIFIQQDNARPHISVNDAEFLEAAQKDGFDIRLTCQPPNSPDMNVLDLGFFRAIQSLQYQEAPRNVDELVVATQKAFDDISIESLSNVFLTLQLCMVEVMKRFGGNNYKIPHINKQKLEREGRLPTTISCDME 398          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: B9FLL3_ORYSJ (Uncharacterized protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=B9FLL3_ORYSJ)

HSP 1 Score: 252 bits (644), Expect = 7.490e-76
Identity = 141/337 (41.84%), Postives = 205/337 (60.83%), Query Frame = 1
Query:   52 VPLKLRTTQRSVSNAVGLPKTTFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVSPSTVPGRPRRFKGMVNVVHVDEKWFFVCKDKQT*YVLDEEPDPGRKVQHRSHILMAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIEFTKESYKRMLIDRVIPDIKRVFPRPPVSASPED--RIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV*LSLQVCLEQIMLTGGDNRSKLPHLNKGRLETAGTLPWQLECKEE 1056
            +PL+ R+T RS++ A+G+ K+T HR  K+  ++     LKP L +  K +RLRW    +   T+P  P+ F  M N++H+DEKWF   K  +T Y+   EP+P R VQ+++ I   M L AVARPR +   N  FDGKIGI+PF  +  AQ+SSRNR  GT+VTKTI+  +++ K  +I +V+P I+  +P+       ED  R +++QQDNAR H+  +D +   A+   G  IR++NQP NSPD N LDL FF S+Q L       N++ LI+ V   + + +P  LNRV ++LQ C  ++M   G N+ K+PH+NK RLE  G LP  L C  +
Sbjct:  205 IPLRQRSTIRSLAEALGVSKSTLHRLFKEGHLRRHSNSLKPYLKEANKKERLRWCVGMLDHRTLPNNPK-FIEMENIIHIDEKWFNATKKDKTYYLHPLEPEPYRTVQNKNAIEKVMFLSAVARPRFDDEGNCTFDGKIGIWPFVRKEPAQRSSRNRERGTLVTKTIKVDRDTMKSFMISKVLPAIRACWPQ-------EDARRTIFIQQDNARTHVPIDDEQFGVAVGQMGLDIRLVNQPPNSPDMNCLDLGFFASLQSLTSTRVSSNMEELIENVHKEYNDYNPNTLNRVFVTLQSCYIEVMKASGGNKYKIPHMNKERLEALGILPKALCCDHQ 533          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0007F012D12.140e-8042.77uncharacterized protein LOC108203813 n=1 Tax=Daucu... [more]
A0A834FTG5_RHOSS3.790e-7941.84Uncharacterized protein n=3 Tax=Rhododendron simsi... [more]
UPI000B4246FA2.390e-7740.39uncharacterized protein LOC110435039 n=1 Tax=Sorgh... [more]
A0A834HDF7_RHOSS2.550e-7742.26Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
UPI0020091A087.240e-7742.11uncharacterized protein LOC125206097 n=1 Tax=Salvi... [more]
UPI00053F3BA87.490e-7741.47uncharacterized protein LOC104908869 n=1 Tax=Beta ... [more]
A0A834FW95_RHOSS8.000e-7741.37Uncharacterized protein n=3 Tax=Rhododendron simsi... [more]
A0A6P6VBP7_COFAR1.370e-7641.67uncharacterized protein LOC113715216 n=4 Tax=Coffe... [more]
UPI00125DF3846.700e-7641.96uncharacterized protein LOC116015901 n=1 Tax=Ipomo... [more]
B9FLL3_ORYSJ7.490e-7641.84Uncharacterized protein n=1 Tax=Oryza sativa subsp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig184402contigH-elongata_contig184402:171..1226 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score158.7
Seed ortholog evalue2.5e-36
Seed eggNOG ortholog161934.XP_010696339.1
EggNOG OGs2CMKC@1,2QQNW@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1056
Cds size531
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig184402.4973.1prot_H-elongata_contig184402.4973.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig184402 303..833 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930056.943636-UTR-H-elongata_contig184402:170..3021622930056.943636-UTR-H-elongata_contig184402:170..302Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig184402 171..302 -
1691679263.9522798-UTR-H-elongata_contig184402:170..3021691679263.9522798-UTR-H-elongata_contig184402:170..302Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig184402 171..302 -
1622930056.9757276-UTR-H-elongata_contig184402:833..12261622930056.9757276-UTR-H-elongata_contig184402:833..1226Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig184402 834..1226 -
1691679263.9720533-UTR-H-elongata_contig184402:833..12261691679263.9720533-UTR-H-elongata_contig184402:833..1226Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig184402 834..1226 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930056.962147-CDS-H-elongata_contig184402:302..8331622930056.962147-CDS-H-elongata_contig184402:302..833Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig184402 303..833 -
1691679263.9630525-CDS-H-elongata_contig184402:302..8331691679263.9630525-CDS-H-elongata_contig184402:302..833Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig184402 303..833 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig184402.4973.1

>prot_H-elongata_contig184402.4973.1 ID=prot_H-elongata_contig184402.4973.1|Name=mRNA_H-elongata_contig184402.4973.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp
MAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVT
KTIEFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPH
LVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMT
PKNVDNLIKVVKDAWEEDSPTVLNRV*
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mRNA from alignment at H-elongata_contig184402:171..1226-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig184402.4973.1 ID=mRNA_H-elongata_contig184402.4973.1|Name=mRNA_H-elongata_contig184402.4973.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1056bp|location=Sequence derived from alignment at H-elongata_contig184402:171..1226- (Himanthalia elongata Himel1 dioecious)
CGCAACGGCCTCCCACGAGATATAGCCTCGTACAAGGAAGCGCTACGCAA CGTCCCACTCAAGCTGCGCACAACACAAAGGAGCGTATCCAATGCTGTCG GCCTACCGAAGACAACGTTTCACCGCAACATGAAGAAGCTTGGAGTGAAG GTGATCAAGCGGTTCTTGAAGCCGCTCCTCACGAAGCAGGGCAAGATAGA TCGGCTGAGATGGGGTAGGCGGTGGGTTTCGCCAAGTACGGTACCGGGGA GACCTCGCAGATTCAAGGGGATGGTGAACGTGGTGCACGTCGACGAGAAG TGGTTTTTCGTCTGCAAAGACAAGCAGACGTAATACGTGCTCGACGAGGA ACCCGACCCGGGCCGGAAGGTTCAACACAGGAGCCACATACTCATGGCGA TGTTGCTGGGAGCTGTCGCGCGACCGAGGCGCAATACCTCCACCAACTCC GACTTCGACGGGAAGATTGGAATTTACCCCTTCACGCATCAAGTGCGAGC CCAGCAAAGCAGCCGGAACAGGGCCGCTGGCACAATGGTGACAAAGACGA TAGAGTTCACCAAGGAGAGCTACAAGAGAATGCTCATCGACCGCGTCATC CCCGACATCAAGAGGGTGTTCCCCCGTCCTCCGGTCAGCGCCAGTCCGGA AGACAGAATCGTTTGGCTGCAGCAGGATAACGCCCGCCCACACCTGGTCA ACAACGACCCAGAACTCACGGCTGCATTGTTGTCAGACGGGTGGGGCATT CGGATGCTTAACCAGCCGGCCAACAGTCCCGACACGAACATCCTTGATTT GGAATTCTTCAACTCCATCCAGCCCCTACAGGACCGCATGACCCCGAAGA ACGTCGACAACCTGATCAAGGTAGTGAAGGACGCGTGGGAGGAAGACTCG CCAACGGTGCTGAACCGGGTGTAGCTGAGCCTGCAGGTCTGCCTGGAGCA GATCATGCTTACCGGAGGGGACAACAGGAGCAAGCTGCCGCACTTGAACA AAGGGAGGCTCGAAACCGCCGGTACGCTGCCGTGGCAGCTAGAGTGCAAG GAGGAG
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Coding sequence (CDS) from alignment at H-elongata_contig184402:171..1226-

>mRNA_H-elongata_contig184402.4973.1 ID=mRNA_H-elongata_contig184402.4973.1|Name=mRNA_H-elongata_contig184402.4973.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1062bp|location=Sequence derived from alignment at H-elongata_contig184402:171..1226- (Himanthalia elongata Himel1 dioecious)
ATGGCGATGTTGCTGGGAGCTGTCGCGCGACCGAGGCGCAATACCTCCAC
CAACTCCGACTTCGACGGGAAGATTGGAATTTACCCCTTCACGCATCAAG
TGCGAGCCCAGCAAAGCAGCCGGAACAGGGCCGCTGGCACAATGGTGACA
AAGACGATAGAGTTCACCAAGGAGAGCTACAAGAGAATGCTCATCGACCG
CGTCATCCCCGACATCAAGAGGGTGTTCCCCCGTCCTCCGGTCAGCGCCA
GTCCGGAAGACAGAATCGTTTGGCTGCAGCAGGATAACGCCCGCCCACAC
CTGGTCAACAACGACCCAGAACTCACGGCTGCATTGTTGTCAGACGGGTG
GGGCATTCGGATGCTTAACCAGCCGGCCAACAGTCCCGACACGAACATCC
TTGATTTGGAATTCTTCAACTCCATCCAGCCCCTACAGGACCGCATGACC
CCGAAGAACGTCGACAACCTGATCAAGGTAGTGAAGGACGCGTGGGAGGA
AGACTCGCCAACGGTGCTGAACCGGGTGTAGATGGCGATGTTGCTGGGAG
CTGTCGCGCGACCGAGGCGCAATACCTCCACCAACTCCGACTTCGACGGG
AAGATTGGAATTTACCCCTTCACGCATCAAGTGCGAGCCCAGCAAAGCAG
CCGGAACAGGGCCGCTGGCACAATGGTGACAAAGACGATAGAGTTCACCA
AGGAGAGCTACAAGAGAATGCTCATCGACCGCGTCATCCCCGACATCAAG
AGGGTGTTCCCCCGTCCTCCGGTCAGCGCCAGTCCGGAAGACAGAATCGT
TTGGCTGCAGCAGGATAACGCCCGCCCACACCTGGTCAACAACGACCCAG
AACTCACGGCTGCATTGTTGTCAGACGGGTGGGGCATTCGGATGCTTAAC
CAGCCGGCCAACAGTCCCGACACGAACATCCTTGATTTGGAATTCTTCAA
CTCCATCCAGCCCCTACAGGACCGCATGACCCCGAAGAACGTCGACAACC
TGATCAAGGTAGTGAAGGACGCGTGGGAGGAAGACTCGCCAACGGTGCTG
AACCGGGTGTAG
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