prot_H-elongata_contig184376.4972.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig184376.4972.1
Unique Nameprot_H-elongata_contig184376.4972.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
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BLAST of mRNA_H-elongata_contig184376.4972.1 vs. uniprot
Match: A0A0C2FEX7_9BILA (Uncharacterized protein (Fragment) n=1 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2FEX7_9BILA)

HSP 1 Score: 54.7 bits (130), Expect = 1.160e-6
Identity = 37/115 (32.17%), Postives = 57/115 (49.57%), Query Frame = 0 
Query:    1 RLGYDVIGLQETRRSGHSSFN---QAGYSVYCSGECGXXXXXKKGQGGVGLAIRTSIIRAARPPEFISDRLLRVTLELQGRAKAITFFVTYAPTETQNASNRDTFWTSMDRAVEE 112
            ++GYDVIGL ETRR  H   N     G  ++  G C       +G GGVG+ + T++       E ++ R+ R+ L   G   A+T FV YAPT + +    + F+  ++    E
Sbjct:    5 KIGYDVIGLTETRR--HQPLNATFDTGEELFL-GTC-----DSRGVGGVGVLVNTNLAINIDSFEQLTTRIGRLRLRRCGSMPAVTIFVAYAPTSSYDEEEIEAFYMDLENFYRE 111
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BLAST of mRNA_H-elongata_contig184376.4972.1 vs. uniprot
Match: W2SH60_NECAM (Uncharacterized protein n=1 Tax=Necator americanus TaxID=51031 RepID=W2SH60_NECAM)

HSP 1 Score: 52.8 bits (125), Expect = 2.310e-6
Identity = 33/112 (29.46%), Postives = 53/112 (47.32%), Query Frame = 0 
Query:    1 RLGYDVIGLQETRRSGHSSFNQAGYSVYCSGECGXXXXXKKGQGGVGLAIRTSIIRAARPPEFISDRLLRVTLELQGRAKAITFFVTYAPTETQNASNRDTFWTSMDRAVEE 112
            ++ YDVIGL ETRR                         K+G GGVG+ + TS+ +     E ++ R+ R+ +   G   A+T FVTYAPT + +    + F+  +++   E
Sbjct:   26 KIKYDVIGLTETRRR---------------------TCDKRGVGGVGVLVNTSMAKNIDSFEELTTRIGRLRMRRCGPTPALTIFVTYAPTSSYDEEEVEAFYLDLEKFYRE 116
[Close]
BLAST of mRNA_H-elongata_contig184376.4972.1 vs. uniprot
Match: A0A6J2YH64_SITOR (craniofacial development protein 2-like n=2 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YH64_SITOR)

HSP 1 Score: 49.7 bits (117), Expect = 7.210e-5
Identity = 31/109 (28.44%), Postives = 53/109 (48.62%), Query Frame = 0 
Query:    5 DVIGLQETRRSGHSSFNQAGYSVYCSGECGXXXXXKKGQGGVGLAIRTSIIRAARPPEFISDRLLRVTLELQGRAKAITFFVTYAPTETQNASNRDTFWTSMDRAVEEV 113
            D+  + ET++ G   +    Y++  SG        K+G  GVGL I           E+ISDR+L VTL +    + I     YAP  +++ + R++F+  +  AV+ +
Sbjct:   20 DICSISETKKKGKGKYEIDDYTLIYSG----VSRDKRGHSGVGLLIDRKYKDHIEKEEYISDRILLVTLNVN--KENIHLISVYAPDISKDRAERESFYEELQEAVDRI 122
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig184376.4972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0C2FEX7_9BILA1.160e-632.17Uncharacterized protein (Fragment) n=1 Tax=Ancylos... [more]
W2SH60_NECAM2.310e-629.46Uncharacterized protein n=1 Tax=Necator americanus... [more]
A0A6J2YH64_SITOR7.210e-528.44craniofacial development protein 2-like n=2 Tax=Si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..114
e-value: 3.0E-10
score: 41.9
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 2..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig184376contigH-elongata_contig184376:799..1140 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig184376.4972.1mRNA_H-elongata_contig184376.4972.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig184376 799..1140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig184376.4972.1 ID=prot_H-elongata_contig184376.4972.1|Name=mRNA_H-elongata_contig184376.4972.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
RLGYDVIGLQETRRSGHSSFNQAGYSVYCSGECGGENGGKKGQGGVGLAI
RTSIIRAARPPEFISDRLLRVTLELQGRAKAITFFVTYAPTETQNASNRD
TFWTSMDRAVEEVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf