prot_H-elongata_contig184332.4970.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig184332.4970.1
Unique Nameprot_H-elongata_contig184332.4970.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig184332.4970.1 vs. uniprot
Match: D7FWD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD2_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 9.150e-16
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 0
Query:    1 SSGAETALQARNPYDVANLGQLLGLTQEQSIRTVSDTPLAVIRRAEARKAR 51
            +SGAET L  R+P+DVANLGQLLGL+QEQS+R VSDTPLAV+RRAEARK R
Sbjct:  220 ASGAETWLNCRSPHDVANLGQLLGLSQEQSLRAVSDTPLAVLRRAEARKGR 270          
BLAST of mRNA_H-elongata_contig184332.4970.1 vs. uniprot
Match: A0A182JDM2_9DIPT (Uncharacterized protein n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182JDM2_9DIPT)

HSP 1 Score: 53.1 bits (126), Expect = 8.640e-7
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    1 SSGAETALQARNPYDVANLGQLLGLTQEQSIRTVSDTPLAVIRRAEARK 49
            SSGA+ A + R+PYD+ANLG + GL++EQS R V D P  ++  AE R+
Sbjct:  187 SSGAKNAFELRSPYDIANLGLIFGLSEEQSKRAVRDVPNKILLAAEGRR 235          
BLAST of mRNA_H-elongata_contig184332.4970.1 vs. uniprot
Match: A7S216_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7S216_NEMVE)

HSP 1 Score: 50.1 bits (118), Expect = 1.020e-5
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 SSGAETALQARNPYDVANLGQLLGLTQEQSIRTVSDTPLAVIRRAEARKA 50
            SSGA+  L  R PYDVANLG+LLGL QE++   VS    A++   EARKA
Sbjct:  189 SSGADGPLDLRGPYDVANLGELLGLKQEKAKSAVSRNIRALLYHVEARKA 238          
BLAST of mRNA_H-elongata_contig184332.4970.1 vs. uniprot
Match: A0A2D4BFJ1_PYTIN (Ribonuclease P protein subunit p30, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFJ1_PYTIN)

HSP 1 Score: 48.9 bits (115), Expect = 2.420e-5
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 SSGAETALQARNPYDVANLGQLLGLTQEQSIRTVSDTPLAVIRRAEARKAR 51
            SSG+   L  R+PYDV N+G L+GLT  Q++  VS+ PLAV+  AE R+ R
Sbjct:  175 SSGSTRDLFLRSPYDVINVGILMGLTYGQALDAVSNAPLAVMEHAEQRRGR 225          
BLAST of mRNA_H-elongata_contig184332.4970.1 vs. uniprot
Match: A0A182QJX9_9DIPT (Uncharacterized protein n=1 Tax=Anopheles farauti TaxID=69004 RepID=A0A182QJX9_9DIPT)

HSP 1 Score: 48.9 bits (115), Expect = 2.530e-5
Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    1 SSGAETALQARNPYDVANLGQLLGLTQEQSIRTVSDTPLAVIRRAEARK 49
            SSGA  A Q R+PYD+ANLG + GL++EQS   +   P  ++  AE R+
Sbjct:  136 SSGASNAFQLRSPYDIANLGLIFGLSEEQSKEAIRGVPNRILLSAEGRR 184          
BLAST of mRNA_H-elongata_contig184332.4970.1 vs. uniprot
Match: A0A182ST08_9DIPT (Uncharacterized protein n=1 Tax=Anopheles maculatus TaxID=74869 RepID=A0A182ST08_9DIPT)

HSP 1 Score: 47.8 bits (112), Expect = 6.440e-5
Identity = 22/49 (44.90%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    1 SSGAETALQARNPYDVANLGQLLGLTQEQSIRTVSDTPLAVIRRAEARK 49
            SSGA+   Q R+PYD+ANLG + GL++EQS  ++   P  ++  AE R+
Sbjct:  127 SSGAKNPFQLRSPYDIANLGLIFGLSEEQSKESIRGVPNRILLSAEGRR 175          
BLAST of mRNA_H-elongata_contig184332.4970.1 vs. uniprot
Match: A0A1B6KHT3_9HEMI (Uncharacterized protein n=2 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KHT3_9HEMI)

HSP 1 Score: 47.4 bits (111), Expect = 9.540e-5
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 SSGAETALQARNPYDVANLGQLLGLTQEQSIRTVSDTPLAVIRRAEARK 49
            SSGA   L+ R+PYD+ANLG L GL++EQ+  ++ +T  A+I RAE R+
Sbjct:  190 SSGATGYLKLRSPYDIANLGILFGLSEEQAKHSMLNTCRALILRAEGRR 238          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig184332.4970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FWD2_ECTSI9.150e-1678.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A182JDM2_9DIPT8.640e-751.02Uncharacterized protein n=1 Tax=Anopheles atroparv... [more]
A7S216_NEMVE1.020e-556.00Predicted protein n=2 Tax=Nematostella vectensis T... [more]
A0A2D4BFJ1_PYTIN2.420e-550.98Ribonuclease P protein subunit p30, putative n=1 T... [more]
A0A182QJX9_9DIPT2.530e-546.94Uncharacterized protein n=1 Tax=Anopheles farauti ... [more]
A0A182ST08_9DIPT6.440e-544.90Uncharacterized protein n=1 Tax=Anopheles maculatu... [more]
A0A1B6KHT3_9HEMI9.540e-551.02Uncharacterized protein n=2 Tax=Graphocephala atro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002738RNase P subunit p30PFAMPF01876RNase_P_p30coord: 1..36
e-value: 1.4E-9
score: 37.7
IPR002738RNase P subunit p30PANTHERPTHR13031RIBONUCLEASE P SUBUNIT P30coord: 1..50
NoneNo IPR availableGENE3D3.20.20.140coord: 1..46
e-value: 3.3E-12
score: 48.3
IPR016195Polymerase/histidinol phosphatase-likeSUPERFAMILY89550PHP domain-likecoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig184332contigH-elongata_contig184332:31..186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig184332.4970.1mRNA_H-elongata_contig184332.4970.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig184332 31..186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig184332.4970.1 ID=prot_H-elongata_contig184332.4970.1|Name=mRNA_H-elongata_contig184332.4970.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
SSGAETALQARNPYDVANLGQLLGLTQEQSIRTVSDTPLAVIRRAEARKA
RR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002738RNase_P_p30
IPR016195Pol/histidinol_Pase-like