prot_H-elongata_contig184136.4962.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig184136.4962.1
Unique Nameprot_H-elongata_contig184136.4962.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
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BLAST of mRNA_H-elongata_contig184136.4962.1 vs. uniprot
Match: D8LB88_ECTSI (Antibiotic biosynthesis monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB88_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 1.800e-16
Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 0 
Query:    9 RERESKLASFSGFQEFMLLRLDDHDQGGGRSGEFGANEA--GYTEFISHTTWAHQLDFLDWK 68
            RERESKLASFSGF++FMLLRLD  +       E GA  A  GYTEF+SHT+WAHQ+DF +WK
Sbjct:    3 RERESKLASFSGFEQFMLLRLDTREVEKNEEEE-GAPAARPGYTEFVSHTSWAHQMDFEEWK 63
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BLAST of mRNA_H-elongata_contig184136.4962.1 vs. uniprot
Match: A0A6H5KCE4_9PHAE (ABM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCE4_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 2.990e-16
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0 
Query:    9 RERESKLASFSGFQEFMLLRLDDHDQGGGRSGEFGANEA--GYTEFISHTTWAHQLDFLDWKK 69
            RERESKLASFSGF++FMLLR+D  +    +  E GA  A  GYTEF+SHTTWAHQ+DF +WK+
Sbjct:   96 RERESKLASFSGFEQFMLLRVDTREAEK-KEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKR 157
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig184136.4962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB88_ECTSI1.800e-1664.52Antibiotic biosynthesis monooxygenase n=1 Tax=Ecto... [more]
A0A6H5KCE4_9PHAE2.990e-1663.49ABM domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 6..71
e-value: 2.0E-5
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig184136contigH-elongata_contig184136:298..513 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig184136.4962.1mRNA_H-elongata_contig184136.4962.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig184136 298..513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig184136.4962.1 ID=prot_H-elongata_contig184136.4962.1|Name=mRNA_H-elongata_contig184136.4962.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
SECETVPLRERESKLASFSGFQEFMLLRLDDHDQGGGRSGEFGANEAGYT
EFISHTTWAHQLDFLDWKKRY*
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