prot_H-elongata_contig18374.4944.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18374.4944.1
Unique Nameprot_H-elongata_contig18374.4944.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
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BLAST of mRNA_H-elongata_contig18374.4944.1 vs. uniprot
Match: A0A6H5L3P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P7_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.130e-6
Identity = 35/93 (37.63%), Postives = 44/93 (47.31%), Query Frame = 0 
Query:    3 PGKNDLRWHTQCIRAVGRLIAEWALVHQPSLAARLVHALKKLLSVQSD--------EDRREPDA-------------NPPQPQWGFLNIGSLL 74
            P ++DL WH  C+R +  L +  AL H PSLAA LVHA  KLLSV           +  R P A             + PQ  WGF+   SL+
Sbjct:   36 PERDDLEWHLACLRTIRGLTSGGALSHVPSLAANLVHAFVKLLSVTGGGGTDALAADSGRHPAAAAGKKMDSSSGGISLPQHLWGFIGGASLV 128
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BLAST of mRNA_H-elongata_contig18374.4944.1 vs. uniprot
Match: D7G264_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G264_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 2.160e-5
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:    3 PGKNDLRWHTQCIRAVGRLIAEWALVHQPSLAARLVHALKKLLSV 47
            P ++DL WH  C+R +  L +  AL H P+LAA LVHA  KLLSV
Sbjct: 1071 PERDDLEWHLACLRTIRGLTSGGALSHVPALAANLVHAFVKLLSV 1115
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18374.4944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3P7_9PHAE1.130e-637.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G264_ECTSI2.160e-553.33Non-specific serine/threonine protein kinase n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18374contigH-elongata_contig18374:6179..6502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18374.4944.1mRNA_H-elongata_contig18374.4944.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18374 6179..6502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18374.4944.1 ID=prot_H-elongata_contig18374.4944.1|Name=mRNA_H-elongata_contig18374.4944.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
MGPGKNDLRWHTQCIRAVGRLIAEWALVHQPSLAARLVHALKKLLSVQSD
EDRREPDANPPQPQWGFLNIGSLLGSPESRDARAGSGEDRSRVESSSGDD
PSVVGEMG
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