mRNA_H-elongata_contig18341.4933.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18341.4933.1
Unique NamemRNA_H-elongata_contig18341.4933.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: A0A6H5JMD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD8_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 3.020e-101
Identity = 148/191 (77.49%), Postives = 170/191 (89.01%), Query Frame = 1
Query:    1 KVGLLGGKDLDLSNPCDALTLEGVKTKTCFVSENIETDNSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAKFAA 573
            KVGLLGG D D  +PCD + LE +K K CFVSE+++ DN+KMELS+SKPYTLPDGT ++LGRERYRAAELLFDPA + REE +SL +TVLD+IL+C+RKTW ILAQTVILTGGTTE+ GLNRRLQRELTKASRA+G+RLK+TVM PEDDHNNTVW+GGSML S GALDGLWFTRAEYEEYGAG IH+KFAA
Sbjct:  205 KVGLLGGDDFDPDDPCDVMKLEALKAKVCFVSEDVDKDNAKMELSMSKPYTLPDGTRVTLGRERYRAAELLFDPAMSLREE-ESLPNTVLDSILSCDRKTWPILAQTVILTGGTTEMPGLNRRLQRELTKASRANGVRLKYTVMGPEDDHNNTVWIGGSMLVSAGALDGLWFTRAEYEEYGAGYIHSKFAA 394          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: D8LK63_ECTSI (Actin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK63_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 3.480e-98
Identity = 147/191 (76.96%), Postives = 172/191 (90.05%), Query Frame = 1
Query:    1 KVGLLGGKDLDLSNPCDALTLEGVKTKTCFVSENIETDNSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAKFAA 573
            KVGL+GG + +  +PCD + LE +K K CFVSE+++ DN+KMELS+SKPYTLPDGT ++LGRERYRAAELLFDPA + REE DSLQ+TVLD+IL+C+RKTW +LAQTVILTGGTTE+ GLNRRLQRELTKASRA+G+RLK+TVM PEDDHNNTVW+GGSMLAS GALDGLWFTRAEYEEYGAG IH+KFAA
Sbjct:  528 KVGLMGGDEFEPDDPCDVMELEALKAKVCFVSEDVDKDNAKMELSMSKPYTLPDGTRVTLGRERYRAAELLFDPAMSLREE-DSLQNTVLDSILSCDRKTWPVLAQTVILTGGTTEMHGLNRRLQRELTKASRANGVRLKYTVMAPEDDHNNTVWIGGSMLASAGALDGLWFTRAEYEEYGAGYIHSKFAA 717          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: A0A0F7RNL9_GONPE (Actin-like protein n=2 Tax=Gonium pectorale TaxID=33097 RepID=A0A0F7RNL9_GONPE)

HSP 1 Score: 121 bits (303), Expect = 1.900e-29
Identity = 71/188 (37.77%), Postives = 103/188 (54.79%), Query Frame = 1
Query:   10 LLGGKDLDLSNPCDALTLEGVKTKTCFVSENI--ETDNSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASR-ASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 564
            LL    + L+N  +   +  VK K  FV+ +   E  +++    + K YTLPDG  IS+G ER+R AE+LFDP     E G  + + ++D++LAC+      L   V+L+GGTT L G+  RL +ELT A+  A  +R+     V   +    VW+GGS+LAS       W TR EY+EYG   +H K
Sbjct:  196 LLTEAGVKLTNSAELEIVRDVKEKLGFVALDFAAELGSARSSSLLHKEYTLPDGNCISIGEERFRCAEVLFDPRPLGHESGGGIANLLMDSVLACDIDVRRELLHNVVLSGGTTMLQGIAARLTKELTAAAPPACPVRV-----VAPPERKFLVWIGGSVLASLATFANQWITREEYDEYGPTVVHRK 378          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: O24426_CHLRE (Actin-like protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=O24426_CHLRE)

HSP 1 Score: 118 bits (296), Expect = 1.960e-28
Identity = 67/180 (37.22%), Postives = 101/180 (56.11%), Query Frame = 1
Query:   34 LSNPCDALTLEGVKTKTCFVSENIETDNSKMELS--ISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTK-ASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 564
            L+N  +   +  +K +  +V+ + +T+ +    S  +SK YTLPDG +I++G ER+R AELLFDP+    E+G+ +   + DA+ AC+      L   V+L+GGTT   G+  RL +ELT  A  A  +R+     V   +    VW+GGS+LAS  +    W T  EY EYG G +H K
Sbjct:  204 LTNSAEMEIVRDIKERLSYVALDYDTELATARSSSVVSKDYTLPDGQSIAVGEERFRCAELLFDPSPLGHEKGEGIHTMLHDAVSACDIDVRKELLYNVVLSGGTTMTQGIAARLHKELTALAPSACTVRV-----VAPPERKFLVWIGGSVLASLASFASQWVTAEEYNEYGPGIVHRK 378          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: A0A8J4DE75_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4DE75_9CHLO)

HSP 1 Score: 115 bits (289), Expect = 2.020e-27
Identity = 66/168 (39.29%), Postives = 98/168 (58.33%), Query Frame = 1
Query:   70 VKTKTCFVSENIETDNSKMELS--ISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTK-ASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 564
            +K +  +V+++ E++      S  + K Y LPDGT IS+G ER+R AE+LFDP    RE+G  +   ++D+I AC+      L   ++L+GGTT + G+  RL +E+T  A   S +R+   V  PE  +   VW+GGS+LAS  +    W TR EY+EYG   IH K
Sbjct:  216 IKERLAYVAQDFESELCVARSSSVMDKNYQLPDGTLISVGEERFRCAEVLFDPTPLGREQGGGVHKMMMDSINACDIDVRKDLLHNLVLSGGTTLVEGIAARLSKEVTAMAPPGSAVRV---VAPPERKY--LVWIGGSVLASLASFSSQWVTRDEYDEYGPSIIHRK 378          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: A0A0B1S619_OESDE (Actin n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1S619_OESDE)

HSP 1 Score: 110 bits (276), Expect = 1.640e-26
Identity = 59/167 (35.33%), Postives = 97/167 (58.08%), Query Frame = 1
Query:   70 VKTKTCFVSENIETD--NSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 564
            +K K C+V+ + E +   S    SI K Y LPDG  I++G ER+RA E+LF P    +E    + +   ++I++C+      L   ++L+GG+T   G+  R+++ELT  + ++   +K  +M P +    +VW+GGS+LAS      +W T+AEY+EYGA  +H K
Sbjct:   92 IKEKLCYVAFDYEQEMIESVDSTSIDKNYELPDGQEITIGSERFRAPEVLFQPHVLGKESS-GIHENCYNSIMSCDIDIRKDLYMNIVLSGGSTMFPGITDRMKKELTTLAPST---VKVKIMAPPE-RKYSVWIGGSVLASLSTFQMMWITKAEYDEYGAAIVHRK 253          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: UPI001E8E345A (actin beta/gamma 1 n=1 Tax=Lentinula edodes TaxID=5353 RepID=UPI001E8E345A)

HSP 1 Score: 110 bits (275), Expect = 1.650e-26
Identity = 59/167 (35.33%), Postives = 93/167 (55.69%), Query Frame = 1
Query:   70 VKTKTCFVSENIETD--NSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 564
            +K + C+V+ + E +   +    ++ K Y LPDG  I++G ER+RA E LF P     E    + +TV D+I  C+      L   ++L+GGTT   GL  R+Q+E+T  + AS   +K  ++ P +    +VW+GGS+LAS      LW ++ EY+E G G +H K
Sbjct:   77 IKERLCYVALDFEQELQTAARSSALEKNYELPDGQVITIGNERFRAPEALFQPHMVGLE-ASGIHETVYDSIFKCDLDVRRELYSNIVLSGGTTMFPGLADRMQKEITSLAPAS---MKVKIVAPPE-RKYSVWIGGSILASLSTFQNLWISKQEYDESGPGIVHRK 238          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: D8TK19_VOLCA (Actin-like protein n=2 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TK19_VOLCA)

HSP 1 Score: 113 bits (282), Expect = 2.060e-26
Identity = 63/187 (33.69%), Postives = 103/187 (55.08%), Query Frame = 1
Query:   10 LLGGKDLDLSNPCDALTLEGVKTKTCFVSENIETDN--SKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 564
            +L    + L N  +   +  +K +  +V+ + E++   ++    + K Y LPDGTTIS+G ER+R +E+LFDP+    E+G  +   + D+I AC+      L + ++L+GGTT + G+  RL +E+T  +  S       V+ P +     VW+GGS+LAS  +    W TR EY+EYG   +H K
Sbjct:  196 MLTESGVKLINTAEMEIVRDIKERLAYVALDFESELRVARSNSVMCKDYQLPDGTTISVGEERFRCSEVLFDPSPLGLEQGSGIHKMLTDSINACDIDVRKNLLENLVLSGGTTMVEGIAARLTKEVTAMAPPSAT---VRVVAPPE-RKFLVWIGGSVLASLASFSSKWVTRDEYDEYGPSIVHRK 378          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: D5MRC0_9EUKA (Actin (Fragment) n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=D5MRC0_9EUKA)

HSP 1 Score: 111 bits (277), Expect = 2.280e-26
Identity = 60/185 (32.43%), Postives = 100/185 (54.05%), Query Frame = 1
Query:   10 LLGGKDLDLSNPCDALTLEGVKTKTCFVSENIETDNSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 564
            LL  +    +   +   +  +K K C+V+ + + + +K +  + K Y LPDG  I++G ER+R  E LFDP+    E    + +T   +I+ C+      L   V+L+GGTT   G+  R+Q+E+T  +  S +R+K  V  PE  ++  VW+GGS+L+S  +   +W T+ EY E G   +H K
Sbjct:  106 LLTERGYSFNTSAEREIVRDIKEKLCYVANDADAEMAKQDSELEKDYMLPDGRMITVGNERFRCPEALFDPSVLGME-ARGIHETTYKSIMGCDMDIRKDLYSNVVLSGGTTMYPGMAERMQKEITSLA-PSAMRVKI-VAPPERKYS--VWIGGSILSSLSSFQTMWITKEEYMENGPSIVHKK 285          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: A0A250XJ58_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XJ58_9CHLO)

HSP 1 Score: 109 bits (272), Expect = 2.880e-26
Identity = 63/174 (36.21%), Postives = 97/174 (55.75%), Query Frame = 1
Query:   70 VKTKTCFVSENIETDNSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEG---------DSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 564
            +K   C VS+ +  D+    +  +  Y LPDG  I +G +R++A ELLF P+  S   G          SLQ  VLD+I +C+      L  +V+LTGGT+ L+GL  RL++EL  A      ++K ++ +   +   +VW+GGS+L+S G+   +W ++ EYEE GA  IH K
Sbjct:   47 IKESICRVSDQLFDDSVNSNIP-TVSYELPDGQEIHVGTDRFKAPELLFQPSLLSSYPGVKLTGKGTPASLQSLVLDSIASCDVDVRKELYASVVLTGGTSLLSGLRDRLEKELVVAG-PQAAKIKVSMPINTQERRFSVWIGGSILSSLGSFQQMWMSKKEYEEAGASLIHRK 218          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMD8_9PHAE3.020e-10177.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK63_ECTSI3.480e-9876.96Actin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A0F7RNL9_GONPE1.900e-2937.77Actin-like protein n=2 Tax=Gonium pectorale TaxID=... [more]
O24426_CHLRE1.960e-2837.22Actin-like protein n=3 Tax=Chlamydomonas TaxID=305... [more]
A0A8J4DE75_9CHLO2.020e-2739.29Uncharacterized protein n=3 Tax=Volvox TaxID=3066 ... [more]
A0A0B1S619_OESDE1.640e-2635.33Actin n=1 Tax=Oesophagostomum dentatum TaxID=61180... [more]
UPI001E8E345A1.650e-2635.33actin beta/gamma 1 n=1 Tax=Lentinula edodes TaxID=... [more]
D8TK19_VOLCA2.060e-2633.69Actin-like protein n=2 Tax=Volvox carteri f. nagar... [more]
D5MRC0_9EUKA2.280e-2632.43Actin (Fragment) n=2 Tax=Palpitomonas bilix TaxID=... [more]
A0A250XJ58_9CHLO2.880e-2636.21Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18341contigH-elongata_contig18341:3694..6558 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score308.1
Seed ortholog evalue2.8e-81
Seed eggNOG ortholog2880.D8LK63
Preferred nameACTL10
KEGG koko:K05692,ko:K16616
KEGG Pathwayko04015,ko04145,ko04210,ko04390,ko04391,ko04510,ko04520,ko04530,ko04611,ko04670,ko04714,ko04745,ko04810,ko04919,ko04921,ko05100,ko05110,ko05130,ko05131,ko05132,ko05164,ko05205,ko05225,ko05410,ko05412,ko05414,ko05416,ko05418,map04015,map04145,map04210,map04390,map04391,map04510,map04520,map04530,map04611,map04670,map04714,map04745,map04810,map04919,map04921,map05100,map05110,map05130,map05131,map05132,map05164,map05205,map05225,map05410,map05412,map05414,map05416,map05418
GOsGO:0001673,GO:0003674,GO:0005198,GO:0005200,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005856,GO:0005929,GO:0006996,GO:0007010,GO:0008150,GO:0009987,GO:0015629,GO:0016043,GO:0031514,GO:0032991,GO:0042995,GO:0043073,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044424,GO:0044464,GO:0071840,GO:0120025
EggNOG free text desc.cytoskeleton organization
EggNOG OGsCOG5277@1,KOG0676@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03021,ko03029,ko03036,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Exons5
Model size576
Cds size576
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18341.4933.1prot_H-elongata_contig18341.4933.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18341 3694..6558 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930053.2772083-CDS-H-elongata_contig18341:3693..37641622930053.2772083-CDS-H-elongata_contig18341:3693..3764Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18341 3694..3764 -
1691679262.5420537-CDS-H-elongata_contig18341:3693..37641691679262.5420537-CDS-H-elongata_contig18341:3693..3764Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18341 3694..3764 -
1622930053.295163-CDS-H-elongata_contig18341:4294..44011622930053.295163-CDS-H-elongata_contig18341:4294..4401Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18341 4295..4401 -
1691679262.5547254-CDS-H-elongata_contig18341:4294..44011691679262.5547254-CDS-H-elongata_contig18341:4294..4401Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18341 4295..4401 -
1622930053.3153121-CDS-H-elongata_contig18341:4801..49251622930053.3153121-CDS-H-elongata_contig18341:4801..4925Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18341 4802..4925 -
1691679262.5632842-CDS-H-elongata_contig18341:4801..49251691679262.5632842-CDS-H-elongata_contig18341:4801..4925Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18341 4802..4925 -
1622930053.330824-CDS-H-elongata_contig18341:5633..57801622930053.330824-CDS-H-elongata_contig18341:5633..5780Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18341 5634..5780 -
1691679262.5720825-CDS-H-elongata_contig18341:5633..57801691679262.5720825-CDS-H-elongata_contig18341:5633..5780Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18341 5634..5780 -
1622930053.347743-CDS-H-elongata_contig18341:6431..65581622930053.347743-CDS-H-elongata_contig18341:6431..6558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18341 6432..6558 -
1691679262.5809283-CDS-H-elongata_contig18341:6431..65581691679262.5809283-CDS-H-elongata_contig18341:6431..6558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18341 6432..6558 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18341.4933.1

>prot_H-elongata_contig18341.4933.1 ID=prot_H-elongata_contig18341.4933.1|Name=mRNA_H-elongata_contig18341.4933.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp
KVGLLGGKDLDLSNPCDALTLEGVKTKTCFVSENIETDNSKMELSISKPY
TLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKT
WAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDH
NNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAKFAA*
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mRNA from alignment at H-elongata_contig18341:3694..6558-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18341.4933.1 ID=mRNA_H-elongata_contig18341.4933.1|Name=mRNA_H-elongata_contig18341.4933.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2865bp|location=Sequence derived from alignment at H-elongata_contig18341:3694..6558- (Himanthalia elongata Himel1 dioecious)
AAGGTGGGGTTGCTGGGCGGAAAAGACCTGGATCTGAGCAACCCTTGTGA CGCCCTCACCCTTGAGGGAGTCAAGACCAAGACTTGCTTCGTCTCCGAGA ACATCGAGACGGACAACTCCAAGATGGGTTAGTAGTTAGTATTCCATATT AAAGAGTATGTTCGTGAGACTAGGAACATATTATAAGATGAGGAATGGGA GAAAAAATGAACTAACTGTGGTTCTTGTATGTTCGTGAGATTTAAAACGG ACCATAAAATAAAATATAGGGGATTTTTCATTCCTCATATCATAATATGT TCCTAGTCTCACGAACATACTGTTATTAGCGCCCAGCTAACTTGTCAGGG CGAACGTACTCTCTGCAGCATAGATTGCATCGTAGGAGAGTTCGAGTTGC CGATGAGTAGTACGTAGGAGGGTGACATTGGTGACATGGGTGACATTGTT ATTCGTCAACATCGGCAGCAGCATTCTTGGTTAGCATCCGCCCCAGCAGT GTAACTTACTGTTGGGGAATACGATTAATCACAGGTGACGATTTTGTGTT CAAAGGTAGTAATGTTCACATTCGAAGCTGACGGTAGTTGGTCATGTCCC CTGTCCCCTGGACTACACCTCTCATAGTGCTAAGAAGGCGTGTATGTTCG GAGGGTTGGAATGAGTTCATATGTTTACTCATAGGGTAATACCTAATATT CTACTGCGGCCATCCTTATCCCATCCCATCCCATTCGATTCGATACGCGA TTTGTGTGGCCATCCCATGCCATACCAGAGCTGAGCATCTCCAAGCCCTA TACCCTCCCCGATGGAACCACTATCTCGTTGGGAAGGGAGCGCTACCGAG CCGCCGAGCTGCTATTCGATCCTGCGACGGCCTCTAGAGAAGAAGGAGAT TCTCTTCAGGACACTGTGCTGGATGGTGAGGATTAATATTGATACAAGTA TTAATTCAAGTATTGATAATAATAATAATGCCGATTTTGCACGAGAGCGG GTTTTTAACTTTAGCACAAGGGCTATGAAAATCGCTGCATTTTTTTTTGC GTTTTGAGCTTGCATGGAGGTTGTGCTAAATAAGCGATCGATAATGACTG ATGTTGACTAATCTTTAACGTCTATAATCGCATGTAATGACTAATGTAAT GACTAATATAATGACTAATGTAATGACTAATAAACTGCGTAGAGTAAGAA ACTGTTTGCAGCAAGCTATGTAGTTGGTTCTCGGTGCTTCGTTCCCGTCA TTGTGTAGAATAAAATATCCCTGGTACCCTGGTACTTAATACAATATACT ACAAATTATGTACTGGTAGTAAATAGAATATAAATATATGTACCATACTA AATACCGGGAGTTTACTATACTTGTATAGCACGAAAAGGGATGATCACGA AAAGGGATGATTTTATCGACTTTTCTTTTCTTCTTTTTTACAAATAGAGC TAGCTAATTTATTTATTTTTTTCAAGGTCGCCAGTGTGGCGCGGAAAAAT ATTTTCGAAAGCTTAAGTCGTTTTGTTATTAGATATAATCACTTTAATGT CATATAATGTCATATCGATCGCTCTCGTCTTTCCACATCTCTCGCTCGCC GATCTTCGGAACGGGGTTGACCGACGGCTGCAGCGATACTGGCCTGTGAA CGCAAAACCTGGGCTATACTGGCACAGACTGTCATCCTTACGGGGGGAAC GACGGAATTGACGGGGCTCAACCGTCGGCTGCAGCGAGAGCTCACGAAGG CCTCCCGGTAGGAACTCCCATATATTACTATGTTATTCTTTTCGATTTTA CTCTTTTCAAATAAAGGTTGCCCCCATTTTTCCTTAAGTATTTCCCCATT TTTGTCCCCATTGTGTTTTTTGGGGATTGGGGAGAGGAGGCGAGCCATTT TTTTTTGTCATTGTGTGGAAACTTTCTAAACGCGGTGAATCTTTCAGCTG AATCGGCATATCTTCCCAATACTGTTCCATTTTTTCTATCCCATATCCCA TATCCCATATTGTTCCATGACACGACGCTGGTACGCTCCGAGAACTCTGT AGAGGATTAATATTGGGGGTACTATACTTTTTGTTTTTTATTTTCAAAAT TTCTTCGTGCATCACGTATCGCTTATCGCTTATCGCGTATCATGGCGGAA TCACAAGAGCGAGCGGGATCAGGCTAAAGTTTACGGTGATGGTGCCGGAG GATGACCATAACAATACCGTCTGGGTCGGAGGCTCCATGCTCGCCTCGAC AGGAGCTCTCGACGGTGAGTCAGCTCGAGTGACCTCCGGAGTAATTGATG ATTGGGATATATCCCAAGCGCAACAGGCAGGGGGATGTTTTCATGCCTCG AAATATATTATCTGTTTCGAGGACTGTGGCCAAGACGAAAAATCATCCCC GTATCCCCGCTTTTCAATCAAAGCGGGTATACGGGGATTTTTCCTCTTGG CCACAGCCTTAAACTTTGTGTGTTGTCCTCTTCTCAAAATACCTTTAGCT TTAGAAATGCTATGTTTTGACAGTGTATATGCTTTACTAGCACTAATGTA GCATTTATTGTCTTTCCTCCGCATTGGCTTGTACCGTTTGTATGATATAC CTTTTTGGTATTGTACCCTTTATCACGAGCAGTGTTTTGTTTTATTTGTG TTCCCAACGTCGTGAACCGGTTGATCGCGCCCTCGCCCCTCCCTCTGTCC CCTGTCCCCTTACTATGTCCCTCTCCTCCCTCCTTTAATACTATATACTA CATTTAATACTATATACTATACTTAATACGATGGAACGCGACAGGCCTCT GGTTCACGCGTGCCGAGTACGAGGAATACGGCGCTGGTCCCATCCACGCT AAATTTGCCGCGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig18341:3694..6558-

>mRNA_H-elongata_contig18341.4933.1 ID=mRNA_H-elongata_contig18341.4933.1|Name=mRNA_H-elongata_contig18341.4933.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at H-elongata_contig18341:3694..6558- (Himanthalia elongata Himel1 dioecious)
AAGGTGGGGTTGCTGGGCGGAAAAGACCTGGATCTGAGCAACCCTTGTGA
CGCCCTCACCCTTGAGGGAGTCAAGACCAAGACTTGCTTCGTCTCCGAGA
ACATCGAGACGGACAACTCCAAGATGGAAGGTGGGGTTGCTGGGCGGAAA
AGACCTGGATCTGAGCAACCCTTGTGACGCCCTCACCCTTGAGGGAGTCA
AGACCAAGACTTGCTTCGTCTCCGAGAACATCGAGACGGACAACTCCAAG
ATGGAGCTGAGCATCTCCAAGCCCTATACCCTCCCCGATGGAACCACTAT
CTCGTTGGGAAGGGAGCGCTACCGAGCCGCCGAGCTGCTATTCGATCCTG
CGACGGCCTCTAGAGAAGAAGGAGATTCTCTTCAGGACACTGTGCTGGAT
GAGCTGAGCATCTCCAAGCCCTATACCCTCCCCGATGGAACCACTATCTC
GTTGGGAAGGGAGCGCTACCGAGCCGCCGAGCTGCTATTCGATCCTGCGA
CGGCCTCTAGAGAAGAAGGAGATTCTCTTCAGGACACTGTGCTGGATGCG
ATACTGGCCTGTGAACGCAAAACCTGGGCTATACTGGCACAGACTGTCAT
CCTTACGGGGGGAACGACGGAATTGACGGGGCTCAACCGTCGGCTGCAGC
GAGAGCTCACGAAGGCCTCCCGCGATACTGGCCTGTGAACGCAAAACCTG
GGCTATACTGGCACAGACTGTCATCCTTACGGGGGGAACGACGGAATTGA
CGGGGCTCAACCGTCGGCTGCAGCGAGAGCTCACGAAGGCCTCCCGAGCG
AGCGGGATCAGGCTAAAGTTTACGGTGATGGTGCCGGAGGATGACCATAA
CAATACCGTCTGGGTCGGAGGCTCCATGCTCGCCTCGACAGGAGCTCTCG
ACGAGCGAGCGGGATCAGGCTAAAGTTTACGGTGATGGTGCCGGAGGATG
ACCATAACAATACCGTCTGGGTCGGAGGCTCCATGCTCGCCTCGACAGGA
GCTCTCGACGGCCTCTGGTTCACGCGTGCCGAGTACGAGGAATACGGCGC
TGGTCCCATCCACGCTAAATTTGCCGCGTGAGCCTCTGGTTCACGCGTGC
CGAGTACGAGGAATACGGCGCTGGTCCCATCCACGCTAAATTTGCCGCGT
GA
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