prot_H-elongata_contig183399.4931.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig183399.4931.1
Unique Name	prot_H-elongata_contig183399.4931.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	97

Homology

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BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot
Match: A0A6H5K2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J8_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 3.730e-19
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 0

Query:    1 MRYIQVDTFVYLGSTISSVGDVSPEIKRRTSYAWNCFLKYSRAVYDNPYIAVADKVRFLKTELLEVMLYGCVTWTLSPGDFDKLREAHRRMLLTCL 96
            M + Q   FVYLG  I   G +  EI  R   A  CF + S+A+YD P   +  KVR L+ E++E +LYGCVTW L P ++ KLR AH   LL C+
Sbjct:  120 MVFKQKKDFVYLGGKICQDGSIEGEINHRVQRAHACFRRNSQAMYDRPGGPLRLKVRLLQAEVVETLLYGCVTWNLKPAEYRKLRSAHHFFLLRCI 215

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BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot
Match: A0A6H5L0G6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0G6_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.600e-18
Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = 0

Query:    3 YIQVDTFVYLGSTISSVGDVSPEIKRRTSYAWNCFLKYSRAVYDNPYIAVADKVRFLKTELLEVMLYGCVTWTLSPGDFDKLREAHRRMLLTCLN 97
            Y Q D FVYLG TIS+ G    EI  R+  AW C+ + S ++YD        K+RFL+ E++E +LYGC +W+L+   + KL   HR+ L  C++
Sbjct:   92 YKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRFLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCID 186

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BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot
Match: A0A6H5K1L2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1L2_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 2.100e-18
Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 0

Query:    3 YIQVDTFVYLGSTISSVGDVSPEIKRRTSYAWNCFLKYSRAVYDNPYIAVADKVRFLKTELLEVMLYGCVTWTLSPGDFDKLREAHRRMLLTCL 96
            Y Q D FVYLG TIS+ G    EI  R+  AW C+ + S ++YD        K+R L+ E++E +LYGC +W+L+   + KL   HR+ L  C+
Sbjct:   28 YKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQRKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCI 121

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BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot
Match: A0A6H5KQQ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ1_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 3.120e-18
Identity = 38/95 (40.00%), Postives = 56/95 (58.95%), Query Frame = 0

Query:    3 YIQVDTFVYLGSTISSVGDVSPEIKRRTSYAWNCFLKYSRAVYDNPYIAVADKVRFLKTELLEVMLYGCVTWTLSPGDFDKLREAHRRMLLTCLN 97
            Y Q D FVYLG TIS+ G    EI  R+  AW C+ + S ++YD        K+R L+ E++E +LYGC +W+L+   + KL   HR+ L  C++
Sbjct:   30 YKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAEVVEALLYGCASWSLTAEHYTKLNGTHRQFLTRCIS 124

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BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot
Match: A0A6H5JKH3_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKH3_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 5.420e-18
Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 0

Query:    3 YIQVDTFVYLGSTISSVGDVSPEIKRRTSYAWNCFLKYSRAVYDNPYIAVADKVRFLKTELLEVMLYGCVTWTLSPGDFDKLREAHRRMLLTCL 96
            Y Q D FVYLG TIS+ G    EI  R+  AW C+ + S ++YD        K+R L+ E++E +LYGC +W+L+   + KL   HR+ L  C+
Sbjct:   64 YKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLARCI 157

[Close]

BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot
Match: A0A6H5L7Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y9_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 7.050e-18
Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = 0

Query:    3 YIQVDTFVYLGSTISSVGDVSPEIKRRTSYAWNCFLKYSRAVYDNPYIAVADKVRFLKTELLEVMLYGCVTWTLSPGDFDKLREAHRRMLLTCL 96
            Y Q D FVYLG TIS+ G    EI  R+  AW C+ + S ++YD   +    K+R L+ E++E +LYGC +W+L+   + KL   HR+ L  C+
Sbjct:   35 YKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRKSASMYDRRRVDRKLKIRLLQAEVVETLLYGCASWSLTAEHYTKLIGTHRQFLTRCI 128

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BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot
Match: A0A6H5LP35_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LP35_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 9.220e-18
Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 0

Query:    3 YIQVDTFVYLGSTISSVGDVSPEIKRRTSYAWNCFLKYSRAVYDNPYIAVADKVRFLKTELLEVMLYGCVTWTLSPGDFDKLREAHRRMLLTCL 96
            Y Q D FVYLG TIS+ G    EI  R+  AW C+ + S ++YD        K+R L  E++E +LYGC +W+L+   + KL   HR+ L  C+
Sbjct:   31 YKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASIYDMRRANRQLKIRLLMAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCM 124

[Close]

BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot
Match: A0A6H5L5J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J5_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.030e-17
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 0

Query:    3 YIQVDTFVYLGSTISSVGDVSPEIKRRTSYAWNCFLKYSRAVYDNPYIAVADKVRFLKTELLEVMLYGCVTWTLSPGDFDKLREAHRRMLLTCL 96
            Y Q D FVYLG  IS+ G    EI  R+  AW CF + S ++YD P      K+R L+ E++E +LYGC +W+L+   + KL   HR+ L  C+
Sbjct:  115 YKQTDRFVYLGRAISADGKADREITSRSCRAWKCFRRNSASMYDRPRANRPLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCI 208

[Close]

BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot
Match: A0A6H5L020_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L020_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.270e-17
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 0

Query:    3 YIQVDTFVYLGSTISSVGDVSPEIKRRTSYAWNCFLKYSRAVYDNPYIAVADKVRFLKTELLEVMLYGCVTWTLSPGDFDKLREAHRRMLLTCL 96
            Y Q D FVYLG TIS+ G V  EI  RT  AW C+ + S ++YD        K+R L+ E++E +LYGC +W+L+   + KL   HR+ L  C+
Sbjct:  552 YKQTDRFVYLGRTISADGKVDREITSRTCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCI 645

[Close]

BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot
Match: A0A6H5JZD4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZD4_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.340e-17
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0

Query:    3 YIQVDTFVYLGSTISSVGDVSPEIKRRTSYAWNCFLKYSRAVYDNPYIAVADKVRFLKTELLEVMLYGCVTWTLSPGDFDKLREAHRRMLLTCL 96
            Y Q D FVYLG TIS+ G    EI  R+  AW C+ + S ++YD        K+R L+ E++E +LYGC +W+L+   + KL E HR+ L  C+
Sbjct:  409 YKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTTEHYAKLNETHRQFLTRCI 502

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot

BLAST of mRNA_H-elongata_contig183399.4931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K2J8_9PHAE	3.730e-19	44.79	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L0G6_9PHAE	1.600e-18	41.05	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K1L2_9PHAE	2.100e-18	40.43	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KQQ1_9PHAE	3.120e-18	40.00	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JKH3_9PHAE	5.420e-18	40.43	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5L7Y9_9PHAE	7.050e-18	40.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5LP35_9PHAE	9.220e-18	40.43	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5L5J5_9PHAE	1.030e-17	41.49	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L020_9PHAE	1.270e-17	42.55	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JZD4_9PHAE	2.340e-17	41.49	Reverse transcriptase domain-containing protein n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47027:SF5		coord: 5..96
None	No IPR available	PANTHER	PTHR47027	FAMILY NOT NAMED	coord: 5..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig183399	contig	H-elongata_contig183399:842..1132 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig183399.4931.1	mRNA_H-elongata_contig183399.4931.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig183399 833..1132 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig183399.4931.1 ID=prot_H-elongata_contig183399.4931.1|Name=mRNA_H-elongata_contig183399.4931.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp
MRYIQVDTFVYLGSTISSVGDVSPEIKRRTSYAWNCFLKYSRAVYDNPYI
AVADKVRFLKTELLEVMLYGCVTWTLSPGDFDKLREAHRRMLLTCLN