prot_H-elongata_contig18328.4925.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18328.4925.1
Unique Nameprot_H-elongata_contig18328.4925.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length185
Homology
BLAST of mRNA_H-elongata_contig18328.4925.1 vs. uniprot
Match: D8LTT7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT7_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 2.640e-60
Identity = 96/130 (73.85%), Postives = 115/130 (88.46%), Query Frame = 0
Query:    2 DLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQMAGACIFAFLTLLAFELMRPHLSQTDAWMYRVGCIVIFFSNFLGLMAKADVSGEDAQSQELFGVLLVCVHAVLIMTIILEGYLAMK 131
            DLQ T+FLWEPYEP N+YYETVECGRRCLLTGALVFVLPNTAGQ AGA +FAF+ LL FEL+RPHLS TDAWMYR+GCI IFFSNFLGLMAKADVS E+AQSQE +G+LL+ VH ++++ I+ + Y++M+
Sbjct: 1540 DLQSTRFLWEPYEPDNYYYETVECGRRCLLTGALVFVLPNTAGQAAGASVFAFVGLLGFELLRPHLSHTDAWMYRIGCITIFFSNFLGLMAKADVSDEEAQSQEAYGLLLIAVHVLMVLAILAQAYVSMQ 1669          
BLAST of mRNA_H-elongata_contig18328.4925.1 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 3.290e-39
Identity = 66/135 (48.89%), Postives = 100/135 (74.07%), Query Frame = 0
Query:    2 DLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQMAGACIFAFLTLLAFELMRPHLSQTDAWMYRVGCIVIFFSNFLGLMAKADVSGEDAQSQELFGVLLVCVHAVLIMTIILEGYLAMKLQLHE 136
            DL P+ FLW+ + P  +YYE VECGRR LLTG L+F+ PNTA Q+A AC+FAF++LL FEL+RPHL   D+W+YR+GC+ IF SNFL L+ K D +G+   ++++FG +++ ++ +LIM ++L  + +M+  + E
Sbjct: 1325 DLVPSMFLWKDFGPDMYYYEVVECGRRILLTGVLIFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCMCIFLSNFLALLIKVDSAGDS--NRDVFGWIMIVINLLLIMAVLLASWFSMQQTMDE 1457          
BLAST of mRNA_H-elongata_contig18328.4925.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.140e-38
Identity = 69/135 (51.11%), Postives = 98/135 (72.59%), Query Frame = 0
Query:    2 DLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQMAGACIFAFLTLLAFELMRPHLSQTDAWMYRVGCIVIFFSNFLGLMAKADVSGEDAQSQELFGVLLVCVHAVLIMTIILEGYLAMKLQLHE 136
            DL P+ FLW+ + P  +YYE VECGRR LLTG LVF+ PNTA Q+A AC+FAF++LL FEL+RPHL   D+W+YR+GC+ IF SNFL L+ K D SG D  + ++FG +++ ++  LIM ++L  + +M+  + E
Sbjct: 1335 DLIPSMFLWKDFGPEIYYYEVVECGRRILLTGVLVFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCLCIFLSNFLALLIKVD-SGVDG-NHDVFGAIMIGINMFLIMAVLLASWFSMQQTMDE 1467          
BLAST of mRNA_H-elongata_contig18328.4925.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 9.610e-38
Identity = 66/154 (42.86%), Postives = 103/154 (66.88%), Query Frame = 0
Query:    2 DLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQMAGACIFAFLTLLAFELMRPHLSQTDAWMYRVGCIVIFFSNFLGLMAKADVSGEDAQSQELFGVLLVCVHAVLIMTIILEGYLAMKLQLHEESTSNDHIDVVPGPMTNKE 155
            DL P+ FLW+ ++P  +YYE +ECGRR LLTGAL+F+ P+TA Q A AC+FAF +LL FEL+RPHL   D+W+YR+GC+ IF SNFL L+ K D +GE  +S  + G +L+ V+ +L++ ++   + A +  + +     +   V    +T+++
Sbjct:  869 DLVPSMFLWKDFDPDMYYYEVIECGRRILLTGALIFIAPHTAAQAAMACMFAFASLLGFELLRPHLDPADSWLYRLGCVTIFLSNFLALLTKVDAAGESNRS--ILGGILIAVNVLLVVAVLASTWFATQQTVDDNREGENAFAVAKVMLTHEQ 1020          
BLAST of mRNA_H-elongata_contig18328.4925.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.350e-37
Identity = 68/142 (47.89%), Postives = 101/142 (71.13%), Query Frame = 0
Query:    2 DLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQMAGACIFAFLTLLAFELMRPHLSQTDAWMYRVGCIVIFFSNFLGLMAKADVSGEDAQSQELFGVLLVCVHAVLIMTIILEGYLAMKLQLHEESTSNDH 143
            DL P+ FLW+ + P  +YYE +ECGRR LLTGAL+F+ P+T  Q A AC+FAF +LL FEL+RPHL   D+W+YR+GC+VIF SNFL L+ KAD +GE ++S  + G ++V ++  LI+ ++   + A + Q  ++S  N++
Sbjct: 1415 DLVPSMFLWKDFGPDMYYYEVIECGRRILLTGALIFIAPHTVAQAAIACMFAFASLLGFELLRPHLDPADSWLYRLGCVVIFLSNFLALLIKADTAGEGSRS--VLGGIMVAINIFLILAVLFSTWFATQ-QSVDDSRDNEN 1553          
BLAST of mRNA_H-elongata_contig18328.4925.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 6.420e-37
Identity = 70/162 (43.21%), Postives = 100/162 (61.73%), Query Frame = 0
Query:    3 LQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQMAGACIFAFLTLLAFELMRPHLSQTDAWMYRVGCIVIFFSNFLGLMAKADVSGEDAQSQELFGVLLVCVHAVLIMTIILEGYLAMK----------LQLHEESTSNDHIDVVPGPMTNK 154
            + PT FLW  Y P  +YYE  EC RR LLTG LVF++P+T GQ+A  C+FAFL+LLAFEL+RPH    D  +YR GC+VIFF+NFL LM KA+V+  D++  E++ V+L+ V+ +  ++I    + A K          + L  +  +   +D + GP   K
Sbjct: 1528 IAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHVQDMMLGVDIVNEKQLDKIIGPKNTK 1689          
BLAST of mRNA_H-elongata_contig18328.4925.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.630e-36
Identity = 67/145 (46.21%), Postives = 93/145 (64.14%), Query Frame = 0
Query:    3 LQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQMAGACIFAFLTLLAFELMRPHLSQTDAWMYRVGCIVIFFSNFLGLMAKADVSGEDAQSQELFGVLLVCVHAVLIMTIILEGYLAMKLQLHEESTSNDHIDVV 147
            + PT FLW  Y P  +YYE  EC RR LLTG LVFV+P+T GQ+A  C+FAFL+LLAFEL+RPH    D  +YR GC+VIFF+NFL LM KA+V+  D++   ++ V+L+ V+ +  ++I    + A K            +D+V
Sbjct: 1734 IAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFVVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVANPDSRGSAVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDMMLGVDIV 1878          
BLAST of mRNA_H-elongata_contig18328.4925.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 1.400e-35
Identity = 65/151 (43.05%), Postives = 96/151 (63.58%), Query Frame = 0
Query:    2 DLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQMAGACIFAFLTLLAFELMRPHLSQTDAWMYRVGCIVIFFSNFLGLMAKADVSGEDAQSQELFGVLLVCVHAVLIMTIILEGYLAMKLQLHEESTSNDHIDVVPGPMT 152
            DL P+ FLW+ + P  +YYE +ECGRR LLTG L+F    TA Q A ACIFAF++LL FEL+RPHL   DAW+YR+GC++IF SNFL L+ K D +GE  ++    G +L+ V+  LI+ ++   + A +  + +     + + +    +T
Sbjct: 1364 DLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADAWLYRLGCVIIFLSNFLALLIKVDAAGEGNRAA--LGGILIAVNVFLILAVLSTSWFATQQMVDDNRNEENSLALAKTMLT 1512          
BLAST of mRNA_H-elongata_contig18328.4925.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 6.420e-35
Identity = 64/151 (42.38%), Postives = 95/151 (62.91%), Query Frame = 0
Query:    2 DLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQMAGACIFAFLTLLAFELMRPHLSQTDAWMYRVGCIVIFFSNFLGLMAKADVSGEDAQSQELFGVLLVCVHAVLIMTIILEGYLAMKLQLHEESTSNDHIDVVPGPMT 152
            DL P+ FLW+ + P  +YYE +ECGRR LLTG L+F    TA Q A ACIFAF++LL FEL+RPHL   D W+YR+GC++IF SNFL L+ K D +GE  ++    G +L+ V+  LI+ ++   + A +  + +     + + +    +T
Sbjct: 1022 DLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADMWLYRLGCVIIFLSNFLALLIKVDAAGEGNRAA--LGGILIAVNVFLILAVLSTSWFATQQMVDDNRNEENSLALAKTMLT 1170          
BLAST of mRNA_H-elongata_contig18328.4925.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.790e-33
Identity = 59/130 (45.38%), Postives = 88/130 (67.69%), Query Frame = 0
Query:    2 DLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQMAGACIFAFLTLLAFELMRPHLSQTDAWMYRVGCIVIFFSNFLGLMAKADVSGEDAQSQELFGVLLVCVHAVLIMTIILEGYLAMK 131
            +L+P K LWEPY+PR ++YE VECGRR +LTG  VF+ P TA Q+A    FA   L+ FE++ P +   DAW+YR G +V+FFS +L L+ K D S E+++SQ++F  +LV  H  +++ ++L   L+ K
Sbjct:  234 NLRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLLSAK 363          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18328.4925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTT7_ECTSI2.640e-6073.85Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FRH3_ECTSI3.290e-3948.89Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
D7FRH4_ECTSI1.140e-3851.11Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JCK8_9PHAE9.610e-3842.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRH0_ECTSI1.350e-3747.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G0B0_ECTSI6.420e-3743.21Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JRA9_9PHAE1.630e-3646.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS31_9PHAE1.400e-3543.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRH1_ECTSI6.420e-3542.38Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5KHA3_9PHAE1.790e-3345.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..94
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 73..92
NoneNo IPR availableTMHMMTMhelixcoord: 38..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18328contigH-elongata_contig18328:3131..5186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18328.4925.1mRNA_H-elongata_contig18328.4925.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18328 3129..5186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18328.4925.1 ID=prot_H-elongata_contig18328.4925.1|Name=mRNA_H-elongata_contig18328.4925.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp
LDLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQMAGAC
IFAFLTLLAFELMRPHLSQTDAWMYRVGCIVIFFSNFLGLMAKADVSGED
AQSQELFGVLLVCVHAVLIMTIILEGYLAMKLQLHEESTSNDHIDVVPGP
MTNKESMEIEPRHGTFNIDGGMNPERQGNSTNMDF
back to top