prot_H-elongata_contig18303.4914.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18303.4914.1
Unique Nameprot_H-elongata_contig18303.4914.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
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BLAST of mRNA_H-elongata_contig18303.4914.1 vs. uniprot
Match: A0A6H5KMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF0_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.560e-17
Identity = 52/115 (45.22%), Postives = 63/115 (54.78%), Query Frame = 0 
Query:    2 SSEAPFDLCLTRGERDAVVLRTIEAFSLNRDQAGVLWRCARWFQPSVAAPTDSQR-------------------------GDQQTEGEERREDEENVPPVLLVHGVFGAGKSLSL 91
            S +  FDLCLTRGER+A V +T+EAF LNRDQA +LWRCA WF+P+ AA  +                            G    EG      E+  P V+LVHGVFGAGKSL+L
Sbjct:  151 SGDRVFDLCLTRGERNAEVSQTVEAFRLNRDQARLLWRCATWFRPAEAAGDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPTEEGGGGMAGEDGAP-VVLVHGVFGAGKSLTL 264
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BLAST of mRNA_H-elongata_contig18303.4914.1 vs. uniprot
Match: A0A152AA36_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152AA36_9MYCE)

HSP 1 Score: 49.7 bits (117), Expect = 7.500e-5
Identity = 32/85 (37.65%), Postives = 41/85 (48.24%), Query Frame = 0 
Query:    7 FDLCLTRGERDAVVLRTIEAFSLNRDQAGVLWRCARWFQPSVAAPTDSQRGDQQTEGEERREDEENVPPVLLVHGVFGAGKSLSL 91
            F + L   E  A+  R I+ ++LN DQ  VL  C +WF                    E  +DEE   PV+LVHGVFG+GKS  L
Sbjct:  812 FAISLNYSEGLAIANRFIKDYTLNIDQKKVLLECLKWFHFKDKL--------------EGLDDEEESFPVILVHGVFGSGKSTLL 882
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18303.4914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KMF0_9PHAE2.560e-1745.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A152AA36_9MYCE7.500e-537.65Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18303contigH-elongata_contig18303:5942..6757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18303.4914.1mRNA_H-elongata_contig18303.4914.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18303 5942..6759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18303.4914.1 ID=prot_H-elongata_contig18303.4914.1|Name=mRNA_H-elongata_contig18303.4914.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
RSSEAPFDLCLTRGERDAVVLRTIEAFSLNRDQAGVLWRCARWFQPSVAA
PTDSQRGDQQTEGEERREDEENVPPVLLVHGVFGAGKSLSL
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