prot_H-elongata_contig182937.4910.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig182937.4910.1
Unique Nameprot_H-elongata_contig182937.4910.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig182937.4910.1 vs. uniprot
Match: A0A6H5KXN7_9PHAE (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXN7_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 2.540e-31
Identity = 56/71 (78.87%), Postives = 65/71 (91.55%), Query Frame = 0
Query:    1 VRGDVFRAPEHLTTFSALFGTGCQLTVIVLMVILFAMAGPLHGDVYEERGELVSTFLVCYAFTSFVSGWVS 71
            V GDVFRAP+HL  FSALFGTGCQL V+VL+VILFA+AGPLHGDVYEERGE+V+TF+VCYA TS VSG++S
Sbjct:  287 VHGDVFRAPKHLMLFSALFGTGCQLAVLVLLVILFAIAGPLHGDVYEERGEMVTTFIVCYALTSLVSGYMS 357          
BLAST of mRNA_H-elongata_contig182937.4910.1 vs. uniprot
Match: D8LEY0_ECTSI (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY0_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 9.980e-31
Identity = 53/68 (77.94%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 VRGDVFRAPEHLTTFSALFGTGCQLTVIVLMVILFAMAGPLHGDVYEERGELVSTFLVCYAFTSFVSG 68
            V GDVFRAP+HL  FSALFGTGCQL V+VL+VILFA+AGPLHGDVYEERGE+V+TF+VCYA T+ +SG
Sbjct:  287 VHGDVFRAPKHLMLFSALFGTGCQLAVLVLLVILFAIAGPLHGDVYEERGEMVTTFIVCYALTTLISG 354          
BLAST of mRNA_H-elongata_contig182937.4910.1 vs. uniprot
Match: A0A835YQT7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.740e-23
Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    1 VRGDVFRAPEHLTTFSALFGTGCQLTVIVLMVILFAMAGPLHGDVYEERGELVSTFLVCYAFTSFVSGWVS 71
            V GDVFRAP HL  F+AL+GTG Q+  +V  V+LFAMAGPLHGDVYEERGE+V+T +V YA T+ V+G+ S
Sbjct:  277 VHGDVFRAPAHLMLFAALYGTGWQIATLVAGVVLFAMAGPLHGDVYEERGEMVTTVIVVYALTAAVAGYGS 347          
BLAST of mRNA_H-elongata_contig182937.4910.1 vs. uniprot
Match: W7TF26_9STRA (Transmembrane 9 superfamily member n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF26_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.010e-22
Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 VRGDVFRAPEHLTTFSALFGTGCQLTVIVLMVILFAMAGPLHGDVYEERGELVSTFLVCYAFTSFVSGWVS 71
            V GDVFRAP HL  FSAL+G GCQ   +VL+V+ +A+AGPLHGDVYEERGELV++ +V YA T  V+G+ S
Sbjct:  278 VHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTS 348          
BLAST of mRNA_H-elongata_contig182937.4910.1 vs. uniprot
Match: A0A7R9W337_9STRA (Transmembrane 9 superfamily member (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W337_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 6.510e-22
Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    1 VRGDVFRAPEHLTTFSALFGTGCQLTVIVLMVILFAMAGPLHGDVYEERGELVSTFLVCYAFTSFVSGWVS 71
            V GDVFRAP HL  F+AL GTG QL V+ L VILFA+AGP+HG+V+EERGE++   +  YA +S VSG+ S
Sbjct:   82 VHGDVFRAPSHLPLFAALIGTGWQLVVLTLGVILFAVAGPIHGEVHEERGEILHAVVWIYALSSVVSGYAS 152          
BLAST of mRNA_H-elongata_contig182937.4910.1 vs. uniprot
Match: A0A448Z640_9STRA (Transmembrane 9 superfamily member n=3 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z640_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.410e-21
Identity = 43/71 (60.56%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    1 VRGDVFRAPEHLTTFSALFGTGCQLTVIVLMVILFAMAGPLHGDVYEERGELVSTFLVCYAFTSFVSGWVS 71
            V GDVFRAP  L  F+AL GTG QL V+   VILFA+ GP+HG+V+EERGE++   L+CYAF++ VSG+VS
Sbjct:  320 VHGDVFRAPSMLPLFAALVGTGSQLVVLTFGVILFAVLGPVHGEVHEERGEMMQAILICYAFSTIVSGFVS 390          
BLAST of mRNA_H-elongata_contig182937.4910.1 vs. uniprot
Match: A0A7S3M626_9STRA (Transmembrane 9 superfamily member (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M626_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.130e-20
Identity = 40/72 (55.56%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    1 VRGDVFRAPEHLTTFSALFGTGCQLTVIVLMVILFAMAGP-LHGDVYEERGELVSTFLVCYAFTSFVSGWVS 71
            V GDVFR PE+L  F A+ GTG QL ++VL VIL+AM GP LHG++YE+RGE++STF++C++ +S ++G+ S
Sbjct:  232 VHGDVFRPPENLELFCAIVGTGWQLVILVLFVILYAMLGPYLHGNMYEDRGEMISTFIICFSLSSAIAGYSS 303          
BLAST of mRNA_H-elongata_contig182937.4910.1 vs. uniprot
Match: A0A1E7FNJ7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNJ7_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.210e-20
Identity = 41/71 (57.75%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    1 VRGDVFRAPEHLTTFSALFGTGCQLTVIVLMVILFAMAGPLHGDVYEERGELVSTFLVCYAFTSFVSGWVS 71
            V GDVFRAP  L  F+AL GTG QL V+   VILFA+ GP+HG+V+EERG+++   L+CYAF++ VSG++S
Sbjct:  322 VHGDVFRAPSTLPLFAALIGTGWQLVVLTFGVILFAVLGPVHGEVHEERGKMMQAILICYAFSTIVSGYMS 392          
BLAST of mRNA_H-elongata_contig182937.4910.1 vs. uniprot
Match: A0A7S4DBZ3_HETAK (Transmembrane 9 superfamily member n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBZ3_HETAK)

HSP 1 Score: 92.4 bits (228), Expect = 2.250e-20
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    1 VRGDVFRAPEHLTTFSALFGTGCQLTVIVLMVILFAMAGPLHGDVYEERGELVSTFLVCYAFTSFVSGWVS 71
            V GDVFRAP HL  F+AL GTG QL  +    +LFA+AGPLHGDVYEERGE+++  +V YA ++ V+G+ S
Sbjct:  126 VHGDVFRAPRHLALFAALVGTGWQLAALAAGAVLFALAGPLHGDVYEERGEMMTACIVMYALSTVVAGYAS 196          
BLAST of mRNA_H-elongata_contig182937.4910.1 vs. uniprot
Match: A0A8J9X954_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X954_PHATR)

HSP 1 Score: 92.4 bits (228), Expect = 2.450e-20
Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    1 VRGDVFRAPEHLTTFSALFGTGCQLTVIVLMVILFAMAGPLHGDVYEERGELVSTFLVCYAFTSFVSGWVS 71
            V GDVFRAP +L  F+AL GTG QL V+ L VILFA+ GP+HG V+EERGEL+   + CY+ +S V+G+VS
Sbjct:  139 VHGDVFRAPSYLPLFAALLGTGWQLVVLTLGVILFAVLGPMHGQVHEERGELLHAVIACYSLSSIVAGFVS 209          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig182937.4910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXN7_9PHAE2.540e-3178.87Transmembrane 9 superfamily member n=1 Tax=Ectocar... [more]
D8LEY0_ECTSI9.980e-3177.94Transmembrane 9 superfamily member n=1 Tax=Ectocar... [more]
A0A835YQT7_9STRA5.740e-2364.79Transmembrane 9 superfamily member n=1 Tax=Tribone... [more]
W7TF26_9STRA2.010e-2263.38Transmembrane 9 superfamily member n=2 Tax=Monodop... [more]
A0A7R9W337_9STRA6.510e-2260.56Transmembrane 9 superfamily member (Fragment) n=1 ... [more]
A0A448Z640_9STRA3.410e-2160.56Transmembrane 9 superfamily member n=3 Tax=Pseudo-... [more]
A0A7S3M626_9STRA1.130e-2055.56Transmembrane 9 superfamily member (Fragment) n=1 ... [more]
A0A1E7FNJ7_9STRA2.210e-2057.75Transmembrane 9 superfamily member n=1 Tax=Fragila... [more]
A0A7S4DBZ3_HETAK2.250e-2057.75Transmembrane 9 superfamily member n=1 Tax=Heteros... [more]
A0A8J9X954_PHATR2.450e-2059.15Hypothetical protein n=1 Tax=Phaeodactylum tricorn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004240Nonaspanin (TM9SF)PFAMPF02990EMP70coord: 1..71
e-value: 6.7E-17
score: 61.3
IPR004240Nonaspanin (TM9SF)PANTHERPTHR10766TRANSMEMBRANE 9 SUPERFAMILY PROTEINcoord: 1..71
NoneNo IPR availablePANTHERPTHR10766:SF100TRANSMEMBRANE 9 SUPERFAMILY MEMBER 1coord: 1..71
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..70
NoneNo IPR availableTMHMMTMhelixcoord: 53..70
NoneNo IPR availableTMHMMTMhelixcoord: 16..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig182937contigH-elongata_contig182937:959..1171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig182937.4910.1mRNA_H-elongata_contig182937.4910.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig182937 959..1171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig182937.4910.1 ID=prot_H-elongata_contig182937.4910.1|Name=mRNA_H-elongata_contig182937.4910.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
VRGDVFRAPEHLTTFSALFGTGCQLTVIVLMVILFAMAGPLHGDVYEERG
ELVSTFLVCYAFTSFVSGWVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004240EMP70