mRNA_H-elongata_contig18282.4906.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18282.4906.1
Unique NamemRNA_H-elongata_contig18282.4906.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig18282.4906.1 vs. uniprot
Match: D8LI54_ECTSI (USP domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI54_ECTSI)

HSP 1 Score: 486 bits (1250), Expect = 1.910e-153
Identity = 281/425 (66.12%), Postives = 305/425 (71.76%), Query Frame = 1 
Query:    1 QDSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDVSLVLRPFGSNQTMKSVTESLEYFLKPEVLDGDNQYYCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYNTFQRIKLNDEMRFPLVLDMNKYVENPGT--------GDE-GGEGRCRRHQRSDFQRSVSLEKKQLQGLLGKVHDGRVPPHVPGNTVKGETETKGSGGTV-----HGPKAGKTEMALKSDGEAAVDVDCVGDGGGGAIAGT------------DPDTDETDKEEGSLDSGASTEAKGGDAHLPELEDYWGIPFQDKREAE---DRKPSALGSIGDPPRGFDGT--GSDRIGTGETNKDDTLVPEEVEGDALKLTQENGPWVYELFAVLIHSGSALGGHYYAHIKSLGDDGGF 1182
            QDSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLD+SLVLRPFGS++TMKSV ESLEYFLKPEVLDGDNQY CQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDY+TFQRIKLN+EMRFPL+LDMNKYV+ PG         G+E GG       +RSDFQRSVSLEKK+LQGLLGKV DG            GE      GGT       G +    EMA   DG     V+   +GGGG + G             DPD D TDKE+GS+ SGAS EA GGD  LP LEDYWG  F++   AE     K    GSIGD  RG  G   GS R G    ++++  VPEEV  D LKL + NGPWVYELFAVLIHSGSALGGHYYAHIKSLGDD G+
Sbjct:  198 QDSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDISLVLRPFGSDKTMKSVPESLEYFLKPEVLDGDNQYCCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYDTFQRIKLNEEMRFPLILDMNKYVDQPGQPADGAASGGNEAGGASGGIVRERSDFQRSVSLEKKKLQGLLGKVKDG---------DASGEGNDASDGGTTPKGNDEGAEGSSLEMAGLVDGS----VEGEDEGGGGGVTGVPVAVTGTVGTGGDPDADGTDKEDGSMGSGASMEANGGDVDLPGLEDYWGTSFEEDNPAELPSVSKGGMFGSIGDN-RGTAGAEAGSGR-GVAWASEENLDVPEEVAEDPLKLVEANGPWVYELFAVLIHSGSALGGHYYAHIKSLGDDAGW 607
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BLAST of mRNA_H-elongata_contig18282.4906.1 vs. uniprot
Match: K3WU38_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU38_GLOUD)

HSP 1 Score: 243 bits (620), Expect = 1.690e-70
Identity = 152/392 (38.78%), Postives = 199/392 (50.77%), Query Frame = 1 
Query:    4 DSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDVSLVLRPFGSNQTMKSVTESLEYFLKPEVLDGDNQYYCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYNTFQRIKLNDEMRFPLVLDMNKYVENPGTGDEGGEGRCRRHQRSDFQRSVSLEKKQLQGLLGKVHDGRVPPHVPGNTVKGETETKGSGGTVHGPKAGKTEMALKSDGEAAVDVDCVGDGGGGAIAGTDPDTDETDKEEGSLDSGASTEAKGGDAHLPELEDYWGIPFQDKREAEDRKPSALGSIGDPPRGFDGTGSDRIGTGETNKDDTLVPEEVEG-----DALKLTQENGPWVYELFAVLIHSGSALGGHYYAHIKSL 1164
            D FQQHDVQELCRVLFDA+E +F+GTVNE LVN+LYQGSL+DYV C  C  ESSR+DNFLD+SLV+RPFGS + MKSV E++E FL+PE+L+ +NQ+ C  C  K DA+KGLKF +LPYLLSLQLKRFDFDY T  RIKL++++ FP  LDMN YV +    + G  GR +        R +S+E+ +L+                                    KA K++   +                                                   L  +++   + F D+ + +D                           E  +D    P E +      D   + + NGP VYEL++VLIHSGSALGGHYYA+IKSL
Sbjct:  152 DVFQQHDVQELCRVLFDAIEKSFKGTVNETLVNDLYQGSLKDYVQCHTCGHESSRIDNFLDLSLVIRPFGSEEMMKSVEEAIELFLRPELLNNENQWMCDQCKTKRDAIKGLKFSKLPYLLSLQLKRFDFDYATMNRIKLHNQVSFPKFLDMNSYVSD----ESGARGRGK------IARKMSMERHELEA-----------------------------------KAHKSDRMRR---------------------------------------------------LSSMDESQPLQFADEDDEQD---------------------------EGRRDSMTAPTEFDTWSATFDPQDMIRRNGPHVYELYSVLIHSGSALGGHYYAYIKSL 420
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BLAST of mRNA_H-elongata_contig18282.4906.1 vs. uniprot
Match: A0A662YII1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YII1_9STRA)

HSP 1 Score: 249 bits (635), Expect = 5.860e-70
Identity = 159/387 (41.09%), Postives = 203/387 (52.45%), Query Frame = 1 
Query:    4 DSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDVSLVLRPFGSNQTMKSVTESLEYFLKPEVLDGDNQYYCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYNTFQRIKLNDEMRFPLVLDMNKYVENPGTGDEGGEGRCRRHQRSDFQRSVSLEKKQLQGLLGKVHDGRVPPHVPGNTVKGETETKGSGGTVHGPKAGKTEMALKSDGEAAVDVDCVGDGGGGAIAGTDPDTDETDKEEGSLDSGASTEAKGGDAHLPELEDYWGIPFQDKREAEDRKPSALGSIGDPPRGFDGTGSDRIGTGETNKDDTLVPEEVEGDALKLTQENGPWVYELFAVLIHSGSALGGHYYAHIKSL 1164
            D FQQHDVQELCRVLFDALE +F+GTVNE LVN+LYQGSL+DYV C EC  ESSR+DNFLD+SLV+RPFGS + MK+V E++E FL+PE+L+ +NQ+ C  C  K DA+KGLKF +LPYLL LQLKRFDFDY T  RIKL++++ FP  LDMN YV +   G   G             R +S+E+ +L+G   + H   +P   P         T  S     G  A    M   S  + +  +  V DG  G         D+ D+ +G+ +                  D W   F                                                  D   + + +GP VYEL++VLIHSGSALGGHYYA+IKSL
Sbjct:  243 DVFQQHDVQELCRVLFDALERSFKGTVNETLVNDLYQGSLKDYVQCCECGYESSRIDNFLDLSLVIRPFGSTEMMKTVEEAIELFLRPELLNKENQWMCDRCKVKRDAIKGLKFSKLPYLLMLQLKRFDFDYATMNRIKLHNKVSFPKYLDMNSYVSDDTAGGVRG----------SIARKMSMERHELEG---RNHHPSIPVAAPEEMPT--IPTPSSPPAAPGIAAVSERMRRLSSMDESQPISFVNDGEMG---------DKLDQVDGATEF-----------------DTWSPTF--------------------------------------------------DPEMMIKRSGPHVYELYSVLIHSGSALGGHYYAYIKSL 538
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BLAST of mRNA_H-elongata_contig18282.4906.1 vs. uniprot
Match: A0A6G0RFZ2_9STRA (Ubiquitin carboxyl-terminal hydrolase 47 n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0RFZ2_9STRA)

HSP 1 Score: 248 bits (634), Expect = 7.080e-70
Identity = 162/398 (40.70%), Postives = 203/398 (51.01%), Query Frame = 1 
Query:    4 DSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDVSLVLRPFGSNQTMKSVTESLEYFLKPEVLDGDNQYYCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYNTFQRIKLNDEMRFPLVLDMNKYVENPGTGDEGGEGRCRRHQRSDFQRSVSLEKKQLQGLLGKVHDGRV---------PPHVPGNTVKGETETKGSGGTVHGPKAGKTEMALKSDGEAAVDVDCVGDGGGGAIAGTDPDTDETDKEEGSLDSGASTEAKGGDAHLPELEDYWGIPFQ--DKREAEDRKPSALGSIGDPPRGFDGTGSDRIGTGETNKDDTLVPEEVEGDALKLTQENGPWVYELFAVLIHSGSALGGHYYAHIKSL 1164
            D FQQHDVQELCRVL DALE +F+GTVNE LVN+LYQGSL+DYV C EC  ESSR+DNFLD+SLV+RPFGS + MK+V E++E FL+PEVL+ +NQ+ C  C  K DA+KGLKF +LPY+L LQLKRFDFDY T  RIKL++++ FP  LDMN YV      DE G GR +        R +S+E+  L+G   K H             PP  PG    GE   +                                                                      LP +++   + F   D++   D +       GD P  FD                T  PE        + + +GP VYEL++VLIHSGSALGGHYYA+IKSL
Sbjct:  203 DVFQQHDVQELCRVLLDALERSFKGTVNETLVNDLYQGSLKDYVQCCECGYESSRIDNFLDLSLVIRPFGSTEMMKTVEEAIELFLRPEVLNKENQWMCDKCKVKRDAIKGLKFSKLPYILMLQLKRFDFDYATMNRIKLHNKVTFPKYLDMNSYVS-----DENGGGRGK------IARKMSMERHVLEG---KNHHKTTEDAPTMPSSPPPTPGLAALGERMHR----------------------------------------------------------------------LPSMDESQPMMFVKGDEKSDNDEEXXXXXXXGDEPVAFD------------TWSPTFDPE-------VMIKRSGPHVYELYSVLIHSGSALGGHYYAYIKSL 497
[Close]
BLAST of mRNA_H-elongata_contig18282.4906.1 vs. uniprot
Match: A0A024U1I6_9STRA (USP domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1I6_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.790e-69
Identity = 163/389 (41.90%), Postives = 201/389 (51.67%), Query Frame = 1 
Query:    4 DSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDVSLVLRPFGSNQTMKSVTESLEYFLKPEVLDGDNQYYCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYNTFQRIKLNDEMRFPLVLDMNKYVENPGTGDEGGEGRCRRHQRSDFQRSVSLEKKQLQGLLGKVHDGRVPPHVPGNTVKGETETKGSGGTVHGPKAGKTEMALKSDGEAAVDVDCVGDGGGGAIAGTDPDTDETDKEEGSLDSGASTEAKGGDAHLPELEDYWGIPFQDKREAEDRKPSALGSIGDPPRGFDGTGSDRIGTGETNKDDTLVPEEVEGDALKLTQENGPWVYELFAVLIHSGSALGGHYYAHIKSLGD 1170
            D FQQHDVQELCRVLFDALE + +GT  E LVN+LYQG L+DYV C  C +ESSRLDNFLD+SLV+RPFGS Q M+SV E++EYFLKPEVL G+NQ+ C  C KK DA+KGLKF +LPYLL+LQLKRFDFDY TF RIKLN+E+RFP  L+MN YV +     +GG             R +SLE+++L       +D R              +  GS               L +D  +   V     GG    + T+   DE D +E                    L+D W   +                                                  D   + Q  GP+VYELF+VLIHSGSA+GGHYYA+IKS  D
Sbjct:  155 DVFQQHDVQELCRVLFDALEESLKGTPTEHLVNDLYQGQLKDYVQCASCGNESSRLDNFLDLSLVIRPFGSTQMMQSVEEAIEYFLKPEVLSGENQWDCSKCAKKQDAIKGLKFSKLPYLLALQLKRFDFDYTTFNRIKLNNEVRFPKYLNMNTYVHDT----KGGV----------IARKMSLERQEL-------NDRRE-------------DDSGSD-------------RLTADATSPTSV-----GGSLPSSPTNAPFDENDDDE-------------------PLQDTWNPDY--------------------------------------------------DVDAVIQSTGPFVYELFSVLIHSGSAMGGHYYAYIKSFED 422
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BLAST of mRNA_H-elongata_contig18282.4906.1 vs. uniprot
Match: A0A0P1AC97_PLAHL (Ubiquitin carboxyl-terminal hydrolase 47-like isoform x1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AC97_PLAHL)

HSP 1 Score: 247 bits (630), Expect = 2.380e-69
Identity = 159/387 (41.09%), Postives = 203/387 (52.45%), Query Frame = 1 
Query:    4 DSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDVSLVLRPFGSNQTMKSVTESLEYFLKPEVLDGDNQYYCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYNTFQRIKLNDEMRFPLVLDMNKYVENPGTGDEGGEGRCRRHQRSDFQRSVSLEKKQLQGLLGKVHDGRVPPHVPGNTVKGETETKGSGGTVHGPKAGKTEMALKSDGEAAVDVDCVGDGGGGAIAGTDPDTDETDKEEGSLDSGASTEAKGGDAHLPELEDYWGIPFQDKREAEDRKPSALGSIGDPPRGFDGTGSDRIGTGETNKDDTLVPEEVEGDALKLTQENGPWVYELFAVLIHSGSALGGHYYAHIKSL 1164
            D FQQHDVQELCRVL DALE +F+GTVNE LVN+LYQGSL+DYV C EC  ESSR+DNFLD+SLV+RPFGS + MK+V E++E FL+PEVL  +NQ+ C  C  K +A+KGLKF +LPY+L LQLKRFDFDY T  RIKL++E+ FP  LDMN YV    +G+ G         R    R +S+E+ +L+G          PP +P +          + G +      +   ++        D D +GDG       TD D D+                         L D W   F                  DP          RI                      + + +GP VYEL+++LIHSGSALGGHYYA+IKSL
Sbjct:  199 DVFQQHDVQELCRVLLDALEKSFRGTVNESLVNDLYQGSLKDYVQCYECRYESSRIDNFLDLSLVIRPFGSTEMMKTVEEAIELFLRPEVLKDENQWMCDRCKVKRNAIKGLKFSKLPYILMLQLKRFDFDYATMNRIKLHNEVTFPKYLDMNSYV----SGENGSA-------RGKVARKMSMERHELEGRHYHNSQEHAPPSLPSSPSP-------TPGLIAANDRNRRLSSMDESHPVTFD-DELGDG-------TDNDADDA------------------------LIDTWSPTF------------------DP----------RI----------------------MVKRSGPHVYELYSILIHSGSALGGHYYAYIKSL 485
[Close]
BLAST of mRNA_H-elongata_contig18282.4906.1 vs. uniprot
Match: W2QWR6_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2QWR6_PHYPN)

HSP 1 Score: 246 bits (627), Expect = 6.030e-69
Identity = 159/388 (40.98%), Postives = 204/388 (52.58%), Query Frame = 1 
Query:    4 DSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDVSLVLRPFGSNQTMKSVTESLEYFLKPEVLDGDNQYYCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYNTFQRIKLNDEMRFPLVLDMNKYVENPGTGDEGGEGRCRRHQRSDFQRSVSLEKKQLQGLLGKVHDGRVPPHVPGNTVKGETETKGSGGTVHGPKAGKTEMALKSDGEAAVDVDCVGDGGGGAIAGTDPDTDETDKEEGSLDSGASTEAKGGDAH-LPELEDYWGIPFQDKREAEDRKPSALGSIGDPPRGFDGTGSDRIGTGETNKDDTLVPEEVEGDALKLTQENGPWVYELFAVLIHSGSALGGHYYAHIKSL 1164
            D FQQHDVQELCRVL DALE TF+GTVNE LVN+LYQGSL+DYV C EC  ESSR+DNFLD+SLV+RPFGS + MK+V E++E FLKPE+L+ +NQ+ C  C  K DA+KGLKF +LPY+L LQLKRFDFDY T  RIKL++++ FP  LDMN YV +   G  G              R +S+E+ +L+G   K  +  VP                               A+ S                 A+A                       A GG  H L  +++   + F +K +  + +              D  G+    T       T  PE        + + +GP VYEL++VLIHSGSALGGHYYA+IKSL
Sbjct:  201 DVFQQHDVQELCRVLLDALEKTFKGTVNENLVNDLYQGSLKDYVQCCECGYESSRIDNFLDLSLVIRPFGSTEMMKTVEEAIELFLKPEMLNKENQWMCDRCKVKRDAIKGLKFSKLPYILMLQLKRFDFDYATMNRIKLHNKVTFPKYLDMNSYVSDENGGVRG-----------KIARKMSMERHELEGKNHKSLEDTVP-------------------------------AMSSXXXXXX-----------ALA-----------------------AMGGRMHRLSSMDESQPVTFDEKEDDINEE--------------DADGASSFDTWSP----TFDPE-------VMIKRSGPHVYELYSVLIHSGSALGGHYYAYIKSL 487
[Close]
BLAST of mRNA_H-elongata_contig18282.4906.1 vs. uniprot
Match: A0A3R7A7E5_9STRA (USP domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7A7E5_9STRA)

HSP 1 Score: 246 bits (627), Expect = 8.120e-69
Identity = 159/389 (40.87%), Postives = 195/389 (50.13%), Query Frame = 1 
Query:    4 DSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDVSLVLRPFGSNQTMKSVTESLEYFLKPEVLDGDNQYYCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYNTFQRIKLNDEMRFPLVLDMNKYVENPGTGDEGGEGRCRRHQRSDFQRSVSLEKKQLQGLLGKVHDGRVPPHVPGNTVKGETETKGSGGTVHGPKAGKTEMALKSDGEAAVDVDCVGDGGGGAIAGTDPDTDETDKEEGSLDSGASTEAKGGDAHLPELEDYWGIPFQDKREAEDRKPSALGSIGDPPRGFDGTGSDRIGTGETNKDDTLVPEEVEGDALKLTQENGPWVYELFAVLIHSGSALGGHYYAHIKSLGD 1170
            D FQQHDVQELCRVLFDALE + +GT  E LVN+LYQG L+DYV C  C +ESSRLDNFLD+SLV+RPFGS + M+SV E++EYFLKPEVL G+NQ+ C  C KK DA+KGLKF +LPYLL+LQLKRFDFDY TF RIKLN+E+RFP  L+MN YV +     +GG             R +SLE+++L       +D R             T     GGT+                                   T+   DE D +E                    L+D W   +                                                  D   + Q  GP+VYELF+VLIHSGSA+GGHYYA+IKS  D
Sbjct:  484 DVFQQHDVQELCRVLFDALEESLKGTPTEHLVNDLYQGQLKDYVQCASCGNESSRLDNFLDLSLVIRPFGSTKMMQSVEEAIEYFLKPEVLSGENQWDCSKCAKKQDAIKGLKFSKLPYLLALQLKRFDFDYTTFNRIKLNNEVRFPKYLNMNTYVHDT----KGGV----------IARKMSLERQEL-------NDRRDDDSGSDRLTADATSPTSVGGTLPSSP-------------------------------TNAPFDENDDDE-------------------PLQDTWNPDY--------------------------------------------------DVDAVIQSTGPFVYELFSVLIHSGSAMGGHYYAYIKSFED 751
[Close]
BLAST of mRNA_H-elongata_contig18282.4906.1 vs. uniprot
Match: A0A8K1FJG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJG8_PYTOL)

HSP 1 Score: 242 bits (617), Expect = 1.520e-67
Identity = 155/390 (39.74%), Postives = 191/390 (48.97%), Query Frame = 1 
Query:    4 DSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDVSLVLRPFGSNQTMKSVTESLEYFLKPEVLDGDNQYYCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYNTFQRIKLNDEMRFPLVLDMNKYVENPGTGDEGGEGRCRRHQRSDFQRSVSLEKKQLQGLLGKVHDGRVPPHVPGNTVKGETETKGSGGTVHGPKAGKTEMALKSDGEAAVDVDCVGDGGGGAIAGTDPDTDETDKEEGSLDSGASTEAKGGDAHLPELEDYWGIPFQDKREAEDRKPSALGSIGDPPRGFDGTGSDRIGTGETNKDDTLVPEEVEGDALKLTQENGPWVYELFAVLIHSGSALGGHYYAHIKSLGDD 1173
            D FQQHDVQELCRVLFDALE +F+GTVNE LVN+LYQG+++DYV C  C  ESSR+D FLD+SLV+RPFGS + MKSV E++E+FLKPE+L+GDNQ+ C  C  K DA+KGLKF +LPYLLSLQLKRFD+DY T  RIKL+D + FP  LDMN YV      DE G        R    R +S+E+ +L    G   D R                                M+   + +A    D  GD                                     +   ED W   F                                                  D   + + +GP+VYEL++VLIHSGSALGGHYYA+IKSL  D
Sbjct:  265 DVFQQHDVQELCRVLFDALEKSFKGTVNETLVNDLYQGTMKDYVQCCTCGYESSRIDEFLDLSLVIRPFGSTKMMKSVDEAIEFFLKPELLNGDNQWMCDRCQTKRDAIKGLKFSKLPYLLSLQLKRFDYDYMTDSRIKLHDRVAFPKYLDMNSYVH-----DEDGA-------RGSIARKMSMERHEL----GAPSDSRT-----------------------------RRMSSMDESQAMAFDDLDGD-------------------------------------ITADEDTWSPSF--------------------------------------------------DVNTMLENSGPYVYELYSVLIHSGSALGGHYYAYIKSLESD 522
[Close]
BLAST of mRNA_H-elongata_contig18282.4906.1 vs. uniprot
Match: A0A225WQY2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WQY2_9STRA)

HSP 1 Score: 241 bits (615), Expect = 2.520e-67
Identity = 155/387 (40.05%), Postives = 199/387 (51.42%), Query Frame = 1 
Query:    4 DSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDVSLVLRPFGSNQTMKSVTESLEYFLKPEVLDGDNQYYCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYNTFQRIKLNDEMRFPLVLDMNKYVENPGTGDEGGEGRCRRHQRSDFQRSVSLEKKQLQGLLGKVHDGRVPPHVPGNTVKGETETKGSGGTVHGPKAGKTEMALKSDGEAAVDVDCVGDGGGGAIAGTDPDTDETDKEEGSLDSGASTEAKGGDAHLPELEDYWGIPFQDKREAEDRKPSALGSIGDPPRGFDGTGSDRIGTGETNKDDTLVPEEVEGDALKLTQENGPWVYELFAVLIHSGSALGGHYYAHIKSL 1164
            D FQQHDVQELCRVL DALE +F+ TVNE LVN+LYQG+L+DYV C EC  ESSR+DNFLD+SLV+RPFGS + MK+V E++E FL+PE+L+ +NQ+ C  C  K DA+KGLKF +LPY+L LQLKRFDFDY T  RIKL++++ FP  LDMN YV +   G  G              R +S+E+ +L+G   K  +  VP      T      T G                L + GE                                               L  +++   + F D     D K        D    FD              + T  P+        +T+ +GP VYEL++VLIHSGSALGGHYYA+IKSL
Sbjct:  189 DVFQQHDVQELCRVLLDALEKSFKDTVNETLVNDLYQGALKDYVQCCECGYESSRIDNFLDLSLVIRPFGSTEMMKTVEEAIELFLRPEMLEKENQWMCDRCKVKRDAIKGLKFSKLPYILMLQLKRFDFDYATMNRIKLHNKVTFPKYLDMNSYVSDENGGVRG-----------KIARKMSMERHELEGKSHKAQEETVPTTF--TTASSPPPTPG----------------LATVGERM-------------------------------------------HRLSSMDESQPMTFVD-----DEKXXXXXXDVDGATSFD------------TWNPTFDPD-------VMTKRSGPHVYELYSVLIHSGSALGGHYYAYIKSL 479
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18282.4906.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI54_ECTSI1.910e-15366.12USP domain-containing protein (Fragment) n=2 Tax=E... [more]
K3WU38_GLOUD1.690e-7038.78Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Glob... [more]
A0A662YII1_9STRA5.860e-7041.09Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A6G0RFZ2_9STRA7.080e-7040.70Ubiquitin carboxyl-terminal hydrolase 47 n=5 Tax=P... [more]
A0A024U1I6_9STRA1.790e-6941.90USP domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A0P1AC97_PLAHL2.380e-6941.09Ubiquitin carboxyl-terminal hydrolase 47-like isof... [more]
W2QWR6_PHYPN6.030e-6940.98Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A3R7A7E5_9STRA8.120e-6940.87USP domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A8K1FJG8_PYTOL1.520e-6739.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225WQY2_9STRA2.520e-6740.05Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18282contigH-elongata_contig18282:650..7051 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score493.8
Seed ortholog evalue7.4e-137
Seed eggNOG ortholog2880.D8LI54
Preferred nameUSP47
KEGG koko:K11857
GOsGO:0000151,GO:0000578,GO:0001558,GO:0001654,GO:0001745,GO:0003002,GO:0003674,GO:0003824,GO:0004843,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006355,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0007346,GO:0007350,GO:0007351,GO:0007389,GO:0007423,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008595,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009653,GO:0009790,GO:0009798,GO:0009880,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009895,GO:0009948,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010389,GO:0010466,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010948,GO:0010951,GO:0010972,GO:0016579,GO:0016787,GO:0019005,GO:0019219,GO:0019222,GO:0019538,GO:0019783,GO:0019904,GO:0023051,GO:0023056,GO:0023057,GO:0030111,GO:0030154,GO:0030162,GO:0030177,GO:0030307,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0031461,GO:0031647,GO:0031935,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032434,GO:0032435,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0034641,GO:0034644,GO:0035282,GO:0035520,GO:0036211,GO:0036459,GO:0040008,GO:0042176,GO:0042177,GO:0042221,GO:0042493,GO:0042675,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043281,GO:0043412,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045786,GO:0045861,GO:0045892,GO:0045927,GO:0045930,GO:0045934,GO:0046483,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0051716,GO:0051726,GO:0052547,GO:0052548,GO:0060255,GO:0060548,GO:0060828,GO:0060968,GO:0061136,GO:0065007,GO:0065008,GO:0065009,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071987,GO:0080090,GO:0080134,GO:0080135,GO:0090263,GO:0090304,GO:0090596,GO:0101005,GO:0104004,GO:0140096,GO:1901360,GO:1901564,GO:1901799,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902229,GO:1902230,GO:1902275,GO:1902494,GO:1902531,GO:1902532,GO:1902679,GO:1902749,GO:1902750,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903506,GO:1903507,GO:1990234,GO:2000058,GO:2000059,GO:2000112,GO:2000113,GO:2000116,GO:2000117,GO:2001020,GO:2001021,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
EggNOG free text desc.thiol-dependent ubiquitin-specific protease activity
EggNOG OGsCOG5077@1,KOG4598@2759
Ec32 ortholog descriptionPeptidase C19, ubiquitin carboxyl-terminal hydrolase
Ec32 orthologEc-26_005270.1
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Hectar predicted targeting categoryother localisation
Exons9
Model size1183
Cds size1182
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930051.1895618-CDS-H-elongata_contig18282:649..8141622930051.1895618-CDS-H-elongata_contig18282:649..814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 650..814 -
1691679261.7640958-CDS-H-elongata_contig18282:649..8141691679261.7640958-CDS-H-elongata_contig18282:649..814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 650..814 -
1622930051.2146082-CDS-H-elongata_contig18282:1161..12911622930051.2146082-CDS-H-elongata_contig18282:1161..1291Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 1162..1291 -
1691679261.7756915-CDS-H-elongata_contig18282:1161..12911691679261.7756915-CDS-H-elongata_contig18282:1161..1291Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 1162..1291 -
1622930051.2296507-CDS-H-elongata_contig18282:1778..18551622930051.2296507-CDS-H-elongata_contig18282:1778..1855Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 1779..1855 -
1691679261.7871501-CDS-H-elongata_contig18282:1778..18551691679261.7871501-CDS-H-elongata_contig18282:1778..1855Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 1779..1855 -
1622930051.2468376-CDS-H-elongata_contig18282:3075..33451622930051.2468376-CDS-H-elongata_contig18282:3075..3345Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 3076..3345 -
1691679261.7974548-CDS-H-elongata_contig18282:3075..33451691679261.7974548-CDS-H-elongata_contig18282:3075..3345Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 3076..3345 -
1622930051.2662265-CDS-H-elongata_contig18282:4188..42961622930051.2662265-CDS-H-elongata_contig18282:4188..4296Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 4189..4296 -
1691679261.8057053-CDS-H-elongata_contig18282:4188..42961691679261.8057053-CDS-H-elongata_contig18282:4188..4296Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 4189..4296 -
1622930051.2809708-CDS-H-elongata_contig18282:4473..46021622930051.2809708-CDS-H-elongata_contig18282:4473..4602Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 4474..4602 -
1691679261.8140187-CDS-H-elongata_contig18282:4473..46021691679261.8140187-CDS-H-elongata_contig18282:4473..4602Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 4474..4602 -
1622930051.2968438-CDS-H-elongata_contig18282:5538..56191622930051.2968438-CDS-H-elongata_contig18282:5538..5619Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 5539..5619 -
1691679261.822348-CDS-H-elongata_contig18282:5538..56191691679261.822348-CDS-H-elongata_contig18282:5538..5619Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 5539..5619 -
1622930051.3150034-CDS-H-elongata_contig18282:5945..60521622930051.3150034-CDS-H-elongata_contig18282:5945..6052Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 5946..6052 -
1691679261.8308868-CDS-H-elongata_contig18282:5945..60521691679261.8308868-CDS-H-elongata_contig18282:5945..6052Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 5946..6052 -
1622930051.333597-CDS-H-elongata_contig18282:6936..70511622930051.333597-CDS-H-elongata_contig18282:6936..7051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 6937..7051 -
1691679261.839779-CDS-H-elongata_contig18282:6936..70511691679261.839779-CDS-H-elongata_contig18282:6936..7051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18282 6937..7051 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18282.4906.1prot_H-elongata_contig18282.4906.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18282 650..7051 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18282.4906.1

>prot_H-elongata_contig18282.4906.1 ID=prot_H-elongata_contig18282.4906.1|Name=mRNA_H-elongata_contig18282.4906.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=394bp
QDSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKEC
HSESSRLDNFLDVSLVLRPFGSNQTMKSVTESLEYFLKPEVLDGDNQYYC
QACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYNTFQRIKLNDEMRFPLV
LDMNKYVENPGTGDEGGEGRCRRHQRSDFQRSVSLEKKQLQGLLGKVHDG
RVPPHVPGNTVKGETETKGSGGTVHGPKAGKTEMALKSDGEAAVDVDCVG
DGGGGAIAGTDPDTDETDKEEGSLDSGASTEAKGGDAHLPELEDYWGIPF
QDKREAEDRKPSALGSIGDPPRGFDGTGSDRIGTGETNKDDTLVPEEVEG
DALKLTQENGPWVYELFAVLIHSGSALGGHYYAHIKSLGDDGGF
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mRNA from alignment at H-elongata_contig18282:650..7051-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18282.4906.1 ID=mRNA_H-elongata_contig18282.4906.1|Name=mRNA_H-elongata_contig18282.4906.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6402bp|location=Sequence derived from alignment at H-elongata_contig18282:650..7051- (Himanthalia elongata Himel1 dioecious)
CAGGACTCTTTCCAGCAACACGATGTTCAGGAGCTTTGCCGAGTGCTGTT
CGACGCGCTGGAGAGCACCTTCCAGGGGACGGTTAACGAGAAGCTCGTGA
ACAATCTTTACCAGGGTATAGTACATTACACTATTAATAAATGACAGGGT
ATAGTACATTACACTATTAATAGATGACAGGGTATAGTACATTACACTAT
TAATAGATGACAGGGTACAGTACATTACACTATTAATAGATGACAGGGTA
TAGTACATTACACTAATAATAGATTACAGGGTACAGTACATTACACTATT
AATAGATTACAGGGTACAGTACATTATACTATTAATAGATTACAGGGTAT
AGTACATTACACTATTGATAGATGACAGGGTATAGTACATTACACTATTG
ATAGATGACAGGGTACAGTCAGTACGACTACGGCATACACCAGAGCTACC
AGGCTAGACGGGGCTTTTTCTAAAAGAAACGTATGAATCTTTTAAGCCCT
CTGTCGCCCAATTAACATCGAGACCCCCCCCCTCCTACGGGGGGCGATGC
TGTACTCCGTAGATCTCGGTGCATTGTTATGAAAATTATCATGCTGACAA
CTTTGCGGTCGAAGTTCGTTGTCGATGTCATGGTCGCCTTGATCCTGGAA
ATAGTTGTTATTAATATAGGAGTAAGTTATCGACAAGATGGCATATTTGC
GTAGTGCTATCATCATATATACTGTAAGTTAGTATTATGTACCAGGGTAT
ATGTTACACAGTATTACTCTTGGGTGTGAGAGATAAGTGCGCGTCGTCGC
AGTTGACCAGATTGATTCTCCTGCGCGTAGGGATGTCTGAAACCGTCATG
TCCTTAAATATTGAAAGGTGGAGGAACCCCTCGATTGTTAGTCGTCCTCC
CGATTGCGCGTGGTCAATGGTCAAGGGTATATCAGCTAAAGTATGCAGAA
TTTGAGTACCCACCCCCGCCCCGTCTATCCCCATGTTGTTGTTACAAAGG
TTCGCTGCGGGACTACGTGACCTGCAAGGAATGTCACTCAGAAAGTAGTC
GCCTCGACAACTTCTTGGATGTTTCGCTGGTCCTTCGGCCGTTCGGGAGC
AACCAGGTGTGAAAGGCGTTTTTCGATCCGCCTTATATTAAATAGAGTGC
TTGCAGGAGGCATGGAAACGGAAGGAGTGTGCTGATTTGTCTACATTTAT
GTGTGTATGCTTCGGATTGGCAAACCGCCCTATGACATGGCTCTGCTGGT
TGTGCCCGCGCTCGGAAGAGTGAATGATTCGTCTTCTAGCAAAAGAAGAC
AAGTACTCTAGGGAGGTGTAATGATGACTCGTAAAAAATTCCGGTGGTCA
TCAAAAATTAACACAATAAAAGGTCCAAATCGAAACAAACCCAAAATATT
GCGTTCGGCAATTATCGTACTGAACGGAGCAGACGATGAAGTCCGTCACG
GAGTCGCTCGAGTACTTTCTCAAGCCGGAAGTGTTGGACGGAGACAACCA
GTACTACTGCCAGGCGAGTTCGATTCACACCTTGTCGTGGAAGGCCGCCT
TGGGTTTGGACGAGAGCTGTAAAGGAAGAATGGTCGGGGAGAGGGGAGAG
GGGAAACAGGTCCCCGCTTGGGTGGGCGGCCGATTGAGCCGTTAGGTGGA
AGTGTCGTAGATGGTGCAGTATACAGGACCCCCGCGGGCAAACGCATCAG
CCCGAAAATCACGACGTACCACCACCCCCTGCTCCCCTTCCCTTCATGGT
AAGGTTAAGTACCTCGGTGGCAAAATCAGATTTATCTTTATTTTCGAAGG
AAAAATAACTTTAGGGGTCAAAAGTCTAAATATGTTGTCTATGGCACGAA
AAACCCGGAGATTTTGCCACACTCCCCCCCCCCCCCCCACCCCTCCCCCG
CGTTGCTGGTGGGATAGCTTCCGTGGGTGGTTTCGGGGGGAGAGGCTATT
TAACCCCCCCCCCCCCCCCCCCCCCAACCCTTCCCCGGTGTGCCGGTGTG
ATGTATCTGTGTGGCAGGGTCGAGGGGTAAGGGTTTTATACCCCGTCAGC
TACGGCAGTGCTGCATGAAGGCCGGCCATGCTTTTGTAAGGGTCGGATGG
AAACGTAGTTTAATGAAAACCATGGCTCTTTGTAGCGCAGCACACTCCTC
CCCGCTATGAGACACTCTTGAACGAATGCGGTGCTGACCAGCTGGGGATC
TCAGGCTACGCGCCCGGCTGAGCAGATTATACCCAGCGATCTATATATTT
TTCATCTACTGTAACCCCATATCCCGTGTAGAACGCGTCTCATGCTTAGG
AAAGCGGGGAACAAGGTAATGAACAAACAAATGCACGAACAAACAAACAA
GAGGAGGAACAACTCTGCCCTTAGTTGGGGGGGGGGTGATATTGATATAT
GCACACACCCCGCCCTCTTCTCTATCCTATATTGCTTGATTGGCGATAGG
CGTGCGACAAGAAGGTGGACGCCGTCAAGGGGCTCAAGTTCGAGCGGCTT
CCGTATCTCCTGTCCCTGCAGCTCAAGCGCTTTGACTTCGACTACAATAC
GTTCCAGCGCATCAAGCTTAATGACGAGGTAAGCGCACCGGTGTTCCATA
CAGGTGGGCGTTATCGAGAGGAGCAAGACCAGTGTTTGGACGACACCACG
CGTTTTGTTGTCTCCGGGTTGTCCTTAAAGCGTATCCAGAAATGTTTGTC
CCTCGCCGTACCCGTTGAATGTGCTTATCAACTGCGGTGTTACGTTTTGG
GGCAGATGCGGTTCCCGCTGGTGTTGGACATGAACAAATACGTGGAAAAC
CCAGGGACCGGGGATGAAGGCGGAGAAGGAAGATGTCGCAGGCACCAGCG
CAGCGACTTTCAGGTACCGCTCCCGGACAGGCCTGACTTTATTATTTTAA
AAATAGGAATGGAAAGGATAGTTACGCGGAGTGGCGTAAACGCAGCGGCG
ATTTAGAGTCAGCCAGAAAGATTCTAGTCAGAAAAAAAAAAAAAAAAAAT
GTTGACGCTGCGGCCGCTACTTTTTATTTCAAGGGGGGCGAGATTTTGAG
GGAGAGATAATGGGGGCTACCTCCCCTTTTTTTTNNNNNNNNNNTAACGC
GGAGGGGCGTAAACGCAGCGGCGATTTAGAGTCAGCAAGAAAAATTCTAG
TAAAAAAAAAAAAAAAAAAAAAATGCTGACGCTGCTGCTGCTACTTATGA
TCCCAAGCGGTCCGAGATTATGAGGGAGGGATATTGGGGACTACCGCCGC
TTTTATTTCTGGAGATGTAACGGTGTCAGCCTCTCAATGCTTGAACTCGC
GACCTTACTCTCGTCATACGAAGTATAGCCGCTCTGGTGCAGTCTTAGGC
TTTTGTTTTACGTTTCCCTCAAATGACCAGACGAACGTACTATTGAGGAA
CCGATTTATCATATGTGAAGATTTTGCACTCAAAGGTATTATTGTACACA
TTCGAACCTGATGGTAGTTGGTCCCCTGGACTGCACCTCTCATGGCGCTA
AGAAGGCGTGGATGTTCGGAGGGTTGGAATGAGTTCAAGTTTTTTTTAAA
TAAAAGAATAAATAGATAGATAAATACCTAATCATGATTGAGCACGATAT
AGAAATAACGCCCGTTCATTTGCTTAACTTTGCTGAACGGGTTCCTCTGG
CCGATGATTTTCTTTTCGACCCTTCTCTTTCTCCCCCCCCCCCCTCCTCT
CCAAAGCGTTCCGTCTCTCTAGAGAAAAAGCAGCTCCAGGGGCTGTTAGG
GAAGGTACACGACGGTAGGGTTCCCCCACACGTTCCTGGGAACACAGTGA
AGGGAGAAACAGAGACCAAGGGATCGGGGGGCACGGTTCACGGGCCCAAG
GCCGGTAAAACCGAAATGGCCTTGAAAAGCGATGGCGAAGCCGCTGTGGA
TGTGGACTGTGTGGGTGATGGTGGTGGTGGAGCGATCGCGGGGACGGACC
CCGACACGGATGAAACAGACAAGGAGGTGTGTTGAGTTCATTTAATGCTA
ATGCTATTATAGCTTCGTGTTACATTGAGTCGTGTCGTGTCGTCTTTCTG
TAGGCAGATTATGTGTGTGAGCGGCGGAGTGGCGAGTGGCAAAAGCGCTT
CTTCTTTTTTCATCTTAGGTTGTGTCGTGTCGTCTTTCTGAATCAAATCG
TCACATCGTGTTGTTTTGTTTTTGGCGCGGGAAAGAAGGGGTTGAGGCTG
TGTGTGTACCCGTCGTGCGATCCTCGATTCTCCCGCCCATTAACATTTTT
TAGAGGCTGTTGGCTCGCTGACGTCTGTAGCCTTTAGAAATGACGACGCC
TTTGCGAAATTCTTGAATCGTATCATGTGTGCGTAGAGCGCGTTACTGAT
TAGAAAGAAAAATGTAAGAAGCACTTGCTCCCCCACTCGTACATGCTGGA
AAGGTTTCCAGGGGAAGTGATGCCCTTCGGAAGTCACACCAGTTGCATTC
CTCGTTAACCTCGTTAACCCCAGCTAGATCTCCTCGCGCGAGCATTCAGC
TCCCCACGGAGAGAATTGTAGCGTCCAAACGAACCTACCCGAGCACTTCC
AGGGAGCTTACCTTTTCCTGCCTCTCGTCGTTGAGATATCGACGGCTGGG
CACCGGTCTGCGTGCTGTATTGGGCGACATCAAAAATGCCTCGCAGTACA
CCAAGACACGTGCAGTACAGTCACACAGACAGTATCCGGTGATAATTTAG
TATTATTTCTATGTTGAGAGAATCTAGATAGATACCCCTTTTTCTGCAGC
CCCGTGGCAACATTATTTATCGTGCCGAGAGAGAAGTATCAAAACTCTAG
AGCCCTTGCATTGATAAGAGATGAATCCGGTAGTTTGGAATAATAATTTA
GTAGAGAAAATAGTATTTTTTTAGGCTTGGCATTACCTTGTAGGCAGAAA
GTCTACAGTACCGTTACATTAGTTTTGTTTGCAGACATTGCGAAGAAATA
TACTAATAATAATTGACGAGAAGACTCTTCCCAAACAATGCCTCCATTTT
TCTCCGGGAGACTTGAGAAATCCGGCCGGGGTTTCCACAAGAGCATCATG
CGAAGGCATTTTCGTTTCCCACAACGTGATAGTAAATTAATACAAGACTT
TTCAATTCACCTGCGAGTGTTTTTTTTTTTCGGTCGGGATTTTGTGGGGG
GGGGGTTAATATTTTAGCAACGTGTTTTATCGTTCGCTTGTTTTAGGAGG
GTTCTCTCGACAGCGGAGCTTCTACGGAAGCTAAGGGCGGCGACGCACAC
CTGCCAGAGCTGGAGGACTACTGGTGCGTAATTTGTAATTTCTGACGGCA
TTTATAGCCTGAGTTGTTTATTACGAGTCGGGCAACGAACGGCCTCGTGT
TCATACAAAATATCTTCGGAAAGTTGGAATGAGCCCAAAGTCTTTTTATA
AATAAAAATATAAATACATCGTAAGAGAAACAGCACGTGAAGTTTGACGT
TCAGATGGAAGCCCTTCATAAATGTCAAGACTGACGGGTATATTTTTTAT
GTCGCAAGGTTCCAATCACCATCAACCACAATTCGAAAGATATGGTGGGG
GGTGGGGGCACTAATTAATCGGTGAAATTTATTGCTTTCGTATGGAGGTG
TTTTAGCATAATTCTGTGAAATTCAAAACGGCTTGTGCGCACCTCCTTCG
GCTTAGAAGTGGGTGAGTGGGTTTTGGAGGTGGTTTAGCAAAGCAAGGTT
ATATCCCCTCCCTACCCTCCCGATGCCCCTTCGATTTCTTCTCGTACTCC
CACCAAAAAGGGGGATTCCCTTTCAGGACAAGAGAGAAGCCGAAGATCGA
AAGCCCAGCGCGTTAGGAAGCATTGGAGATCCCCCAAGAGGCTTCGATGG
CACGGGGTCGGACAGGATTGGAACCGGGGAAACCAACAAGGTCGGTCCAA
CACTCGGTTTCATCATTATATTTAGAGAGAATCGCTTGAGGCCGGCCAAG
ACGAAGGTTTGGCCTCGAATGGCGTCGGAAACAGAGAAAGTGAGCGTCGT
CGTTCCGTGGTCAAAGGGTGCTTGTTTCCTGCGATCTCTTGGGAAATATT
ATTAAAAAATAAAGGTCCCTGTCGTGAGGTACCTCGAGCAGAGTGTTACG
TGTGGTAGGAGAAAGTTGTTTATTTTTGGCATGTTATTTATCGCTCTCGC
ATCCCCCGCCTCCCTCACAACGCCTTCTCGATCTTCTAAAACTTTTGTTC
CATCTCGGTTGTGGGTGGTGCGAATTGCGGTGCTCAGGATGACACCCTCG
TCCCGGAAGAGGTCGAAGGGGACGCTCTCAAGCTCACCCAGGAAAATGGG
CCCTGGGTGTACGAGCTGTTCGCGGTATTGATCCACTCGGGAAGCGCGCT
CGGCGGCCACTACTACGCCCACATTAAGTCTCTGGGTGACGACGGTGGGT
TC
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Coding sequence (CDS) from alignment at H-elongata_contig18282:650..7051-

>mRNA_H-elongata_contig18282.4906.1 ID=mRNA_H-elongata_contig18282.4906.1|Name=mRNA_H-elongata_contig18282.4906.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2364bp|location=Sequence derived from alignment at H-elongata_contig18282:650..7051- (Himanthalia elongata Himel1 dioecious)
CAGGACTCTTTCCAGCAACACGATGTTCAGGAGCTTTGCCGAGTGCTGTT
CGACGCGCTGGAGAGCACCTTCCAGGGGACGGTTAACGAGAAGCTCGTGA
ACAATCTTTACCAGGCAGGACTCTTTCCAGCAACACGATGTTCAGGAGCT
TTGCCGAGTGCTGTTCGACGCGCTGGAGAGCACCTTCCAGGGGACGGTTA
ACGAGAAGCTCGTGAACAATCTTTACCAGGGTTCGCTGCGGGACTACGTG
ACCTGCAAGGAATGTCACTCAGAAAGTAGTCGCCTCGACAACTTCTTGGA
TGTTTCGCTGGTCCTTCGGCCGTTCGGGAGCAACCAGGTTCGCTGCGGGA
CTACGTGACCTGCAAGGAATGTCACTCAGAAAGTAGTCGCCTCGACAACT
TCTTGGATGTTTCGCTGGTCCTTCGGCCGTTCGGGAGCAACCAGACGATG
AAGTCCGTCACGGAGTCGCTCGAGTACTTTCTCAAGCCGGAAGTGTTGGA
CGGAGACAACCAGTACTACTGCCAGACGATGAAGTCCGTCACGGAGTCGC
TCGAGTACTTTCTCAAGCCGGAAGTGTTGGACGGAGACAACCAGTACTAC
TGCCAGGCGTGCGACAAGAAGGTGGACGCCGTCAAGGGGCTCAAGTTCGA
GCGGCTTCCGTATCTCCTGTCCCTGCAGCTCAAGCGCTTTGACTTCGACT
ACAATACGTTCCAGCGCATCAAGCTTAATGACGAGGCGTGCGACAAGAAG
GTGGACGCCGTCAAGGGGCTCAAGTTCGAGCGGCTTCCGTATCTCCTGTC
CCTGCAGCTCAAGCGCTTTGACTTCGACTACAATACGTTCCAGCGCATCA
AGCTTAATGACGAGATGCGGTTCCCGCTGGTGTTGGACATGAACAAATAC
GTGGAAAACCCAGGGACCGGGGATGAAGGCGGAGAAGGAAGATGTCGCAG
GCACCAGCGCAGCGACTTTCAGATGCGGTTCCCGCTGGTGTTGGACATGA
ACAAATACGTGGAAAACCCAGGGACCGGGGATGAAGGCGGAGAAGGAAGA
TGTCGCAGGCACCAGCGCAGCGACTTTCAGCGTTCCGTCTCTCTAGAGAA
AAAGCAGCTCCAGGGGCTGTTAGGGAAGGTACACGACGGTAGGGTTCCCC
CACACGTTCCTGGGAACACAGTGAAGGGAGAAACAGAGACCAAGGGATCG
GGGGGCACGGTTCACGGGCCCAAGGCCGGTAAAACCGAAATGGCCTTGAA
AAGCGATGGCGAAGCCGCTGTGGATGTGGACTGTGTGGGTGATGGTGGTG
GTGGAGCGATCGCGGGGACGGACCCCGACACGGATGAAACAGACAAGGAG
CGTTCCGTCTCTCTAGAGAAAAAGCAGCTCCAGGGGCTGTTAGGGAAGGT
ACACGACGGTAGGGTTCCCCCACACGTTCCTGGGAACACAGTGAAGGGAG
AAACAGAGACCAAGGGATCGGGGGGCACGGTTCACGGGCCCAAGGCCGGT
AAAACCGAAATGGCCTTGAAAAGCGATGGCGAAGCCGCTGTGGATGTGGA
CTGTGTGGGTGATGGTGGTGGTGGAGCGATCGCGGGGACGGACCCCGACA
CGGATGAAACAGACAAGGAGGAGGGTTCTCTCGACAGCGGAGCTTCTACG
GAAGCTAAGGGCGGCGACGCACACCTGCCAGAGCTGGAGGACTACTGGAG
GGTTCTCTCGACAGCGGAGCTTCTACGGAAGCTAAGGGCGGCGACGCACA
CCTGCCAGAGCTGGAGGACTACTGGGGGATTCCCTTTCAGGACAAGAGAG
AAGCCGAAGATCGAAAGCCCAGCGCGTTAGGAAGCATTGGAGATCCCCCA
AGAGGCTTCGATGGCACGGGGTCGGACAGGATTGGAACCGGGGAAACCAA
CAAGGGGGATTCCCTTTCAGGACAAGAGAGAAGCCGAAGATCGAAAGCCC
AGCGCGTTAGGAAGCATTGGAGATCCCCCAAGAGGCTTCGATGGCACGGG
GTCGGACAGGATTGGAACCGGGGAAACCAACAAGGATGACACCCTCGTCC
CGGAAGAGGTCGAAGGGGACGCTCTCAAGCTCACCCAGGAAAATGGGCCC
TGGGTGTACGAGCTGTTCGCGGTATTGATCCACTCGGGAAGCGCGCTCGG
CGGCCACTACTACGCCCACATTAAGTCTCTGGGTGACGACGGTGGGTTCG
ATGACACCCTCGTCCCGGAAGAGGTCGAAGGGGACGCTCTCAAGCTCACC
CAGGAAAATGGGCCCTGGGTGTACGAGCTGTTCGCGGTATTGATCCACTC
GGGAAGCGCGCTCGGCGGCCACTACTACGCCCACATTAAGTCTCTGGGTG
ACGACGGTGGGTTC
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