mRNA_H-elongata_contig182728.4904.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig182728.4904.1 vs. uniprot
Match: D7FX98_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX98_ECTSI) HSP 1 Score: 108 bits (271), Expect = 6.850e-26 Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 1
Query: 4 QDTNYYFDVNAGHLDGALDIFSRFFIDPLFTESATERELTAIDNENSNNLMSDSWRLVQ 180
+DTNYYFDVNAGHLDGAL+IFSRFF+DPLFTESAT RELTAIDNENS NL SD WR+VQ
Sbjct: 110 EDTNYYFDVNAGHLDGALEIFSRFFVDPLFTESATGRELTAIDNENSKNLNSDPWRIVQ 168
BLAST of mRNA_H-elongata_contig182728.4904.1 vs. uniprot
Match: A0A7S0LM33_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LM33_9EUKA) HSP 1 Score: 85.5 bits (210), Expect = 1.230e-19 Identity = 39/60 (65.00%), Postives = 48/60 (80.00%), Query Frame = 1
Query: 1 YQDTNYYFDVNAGHLDGALDIFSRFFIDPLFTESATERELTAIDNENSNNLMSDSWRLVQ 180
+++TN+YFDV HL ALD F++FF+ PLFTESAT REL AID+EN+ NL SD WRLVQ
Sbjct: 32 FENTNFYFDVTVAHLSEALDRFAQFFLGPLFTESATSRELKAIDSENAKNLQSDGWRLVQ 91
BLAST of mRNA_H-elongata_contig182728.4904.1 vs. uniprot
Match: A0A507DLQ2_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DLQ2_9FUNG) HSP 1 Score: 89.4 bits (220), Expect = 5.370e-19 Identity = 41/70 (58.57%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 4 QDTNYYFDVNAGHLDGALDIFSRFFIDPLFTESATERELTAIDNENSNNLMSDSWRLVQARASFLTQGSP 213
++TNYYFDVNA HL+GALD F++FFI PLF ES T+REL A+D+E+ NL SDSWRL Q ++ P
Sbjct: 104 ENTNYYFDVNADHLEGALDRFAQFFIAPLFLESTTDRELNAVDSEHKKNLQSDSWRLFQLEKDLCSKDHP 173
BLAST of mRNA_H-elongata_contig182728.4904.1 vs. uniprot
Match: A0A507BNK7_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BNK7_9FUNG) HSP 1 Score: 88.6 bits (218), Expect = 1.000e-18 Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 4 QDTNYYFDVNAGHLDGALDIFSRFFIDPLFTESATERELTAIDNENSNNLMSDSWRLVQ 180
+DTNYYFDVNA HL+GALD F++FFI PLF E+ T+REL A+D+E+ NL SDSWRL Q
Sbjct: 103 EDTNYYFDVNANHLEGALDRFAQFFIAPLFLENTTDRELQAVDSEHKKNLQSDSWRLFQ 161
BLAST of mRNA_H-elongata_contig182728.4904.1 vs. uniprot
Match: G3BAH2_CANTC (Uncharacterized protein n=1 Tax=Candida tenuis (strain ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 / NBRC 10315 / NRRL Y-1498 / VKM Y-70) TaxID=590646 RepID=G3BAH2_CANTC) HSP 1 Score: 88.2 bits (217), Expect = 1.370e-18 Identity = 40/80 (50.00%), Postives = 55/80 (68.75%), Query Frame = 1
Query: 1 YQDTNYYFDVNAGHLDGALDIFSRFFIDPLFTESATERELTAIDNENSNNLMSDSWRLVQARASFLTQGSPNDHTHTHSH 240
++ TNYYF+VN+GHL+GALD F++FFI+PLF ES +RE+ A+D+EN NL +D WR Q S P +H T +H
Sbjct: 101 FEHTNYYFEVNSGHLEGALDRFAQFFIEPLFDESCKDREINAVDSENKKNLQNDLWRFYQLEKSTSNPKHPYNHFSTGNH 180
BLAST of mRNA_H-elongata_contig182728.4904.1 vs. uniprot
Match: A0A2K1KIZ4_PHYPA (Uncharacterized protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KIZ4_PHYPA) HSP 1 Score: 87.8 bits (216), Expect = 1.870e-18 Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 1 YQDTNYYFDVNAGHLDGALDIFSRFFIDPLFTESATERELTAIDNENSNNLMSDSWRLVQARASFLTQGSP 213
+Q TNY+FDVNAGHL+ ALD F++FFI PL + AT RE+ A+D+ENS NL+SDSWRL Q + F ++ P
Sbjct: 100 HQHTNYHFDVNAGHLEEALDRFAQFFICPLLSPEATSREIHAVDSENSKNLLSDSWRLCQLQKHFSSKDHP 170
BLAST of mRNA_H-elongata_contig182728.4904.1 vs. uniprot
Match: A0A7S4NAS1_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NAS1_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.550e-18 Identity = 40/70 (57.14%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 4 QDTNYYFDVNAGHLDGALDIFSRFFIDPLFTESATERELTAIDNENSNNLMSDSWRLVQARASFLTQGSP 213
+ TNYYFDV+A HLDGALD F++FFI PLFT +AT RE+ A+D+E+S NL SD WR Q S ++ P
Sbjct: 163 ESTNYYFDVSADHLDGALDRFAQFFISPLFTSAATNREMNAVDSEHSKNLQSDHWRSFQLYKSLASENHP 232
BLAST of mRNA_H-elongata_contig182728.4904.1 vs. uniprot
Match: A0A6P8YWR6_THRPL (insulin-degrading enzyme isoform X1 n=2 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8YWR6_THRPL) HSP 1 Score: 85.1 bits (209), Expect = 1.650e-17 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 10 TNYYFDVNAGHLDGALDIFSRFFIDPLFTESATERELTAIDNENSNNLMSDSWRLVQARASFLTQGSP 213
TNYYFDV L LDIFS+FFI PLFTESAT++E+ AI++EN+NN++ D+WRL Q R S +G P
Sbjct: 138 TNYYFDVAPDRLKETLDIFSQFFIAPLFTESATDKEVNAIESENANNILRDAWRLSQLRKSLSKKGHP 205
BLAST of mRNA_H-elongata_contig182728.4904.1 vs. uniprot
Match: A0A6J1SSA9_FRAOC (insulin-degrading enzyme isoform X1 n=2 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SSA9_FRAOC) HSP 1 Score: 85.1 bits (209), Expect = 1.650e-17 Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 10 TNYYFDVNAGHLDGALDIFSRFFIDPLFTESATERELTAIDNENSNNLMSDSWRLVQARASFLTQGSP 213
TNYYFDV HL LDIF++FFI PLFTESAT++E+ AI++EN NNL+ D WRL Q + S +G P
Sbjct: 138 TNYYFDVAPDHLKETLDIFAQFFIAPLFTESATDKEVNAIESENDNNLLRDVWRLSQLKKSLSKKGHP 205
BLAST of mRNA_H-elongata_contig182728.4904.1 vs. uniprot
Match: A0A7S2L3H0_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3H0_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.260e-17 Identity = 37/70 (52.86%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 4 QDTNYYFDVNAGHLDGALDIFSRFFIDPLFTESATERELTAIDNENSNNLMSDSWRLVQARASFLTQGSP 213
+DTNYYFDVNA +L+GALD F++FFI+PLF E + ERE+ A+D+E++ NL +D WR+ Q + S + P
Sbjct: 124 EDTNYYFDVNADYLEGALDRFAQFFIEPLFLEDSVEREVCAVDSEHAKNLQNDFWRIFQLQKSLCREDHP 193 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig182728.4904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig182728.4904.1 >prot_H-elongata_contig182728.4904.1 ID=prot_H-elongata_contig182728.4904.1|Name=mRNA_H-elongata_contig182728.4904.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp YQDTNYYFDVNAGHLDGALDIFSRFFIDPLFTESATERELTAIDNENSNNback to top mRNA from alignment at H-elongata_contig182728:335..574+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig182728.4904.1 ID=mRNA_H-elongata_contig182728.4904.1|Name=mRNA_H-elongata_contig182728.4904.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=240bp|location=Sequence derived from alignment at H-elongata_contig182728:335..574+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig182728:335..574+ >mRNA_H-elongata_contig182728.4904.1 ID=mRNA_H-elongata_contig182728.4904.1|Name=mRNA_H-elongata_contig182728.4904.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=480bp|location=Sequence derived from alignment at H-elongata_contig182728:335..574+ (Himanthalia elongata Himel1 dioecious)back to top |