mRNA_H-elongata_contig1827.4901.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1827.4901.1
Unique NamemRNA_H-elongata_contig1827.4901.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig1827.4901.1 vs. uniprot
Match: D8LQ45_ECTSI (Phosphoesterase, RecJ-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ45_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 5.920e-57
Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 1 
Query:  784 PRPQALNVVLTHTMADFDGLAAAVGLAKLWQDERPQDECCVCIPRGAHPVVKRFLALHKNFFPIKALRDINHDQIFRVGLVDAQRMDRLGAAVSLLRNASEVVVVDHHVEQHTDINATTIIIEQ 1155
            P  QALNVVLTHT ADFD LAAAVGLAKLWQDERP DECCVC+PRG HPVVKRFL LHKN FPIKALRDI+HD+IFRVGLVDAQ++DR+G A SLL NA+EV VVDHH EQ +DINAT+I+IE+
Sbjct:  173 PNTQALNVVLTHTTADFDTLAAAVGLAKLWQDERPDDECCVCLPRGTHPVVKRFLTLHKNLFPIKALRDIDHDRIFRVGLVDAQKIDRIGTAASLLANATEVHVVDHHNEQSSDINATSIVIEE 296
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BLAST of mRNA_H-elongata_contig1827.4901.1 vs. uniprot
Match: A0A835YMN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMN8_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.950e-34
Identity = 87/180 (48.33%), Postives = 104/180 (57.78%), Query Frame = 1 
Query:  718 RMDLPVPSLSRTTPPT-------PTGQDSPRPQALNVVLTHTMADFDGLAAAVGLAKLWQDERPQDECCVCIPRGAHPVVKRFLALHKNFFPIKALRDINHDQIFRVGLVDAQRMDRLGAAVSLLRNASE---------------------------VVVVDHHVEQHTDINATTIIIEQ 1155
            RM L V   SRT  P        P G D      LNVVLTHT ADFD LAAAVGLA++WQ E+P   C VC+PRG+HP V  FLALHKN FP+ AL+D++ DQ+ RVGLVDAQR DR+G A +LL  A E                           V V DHH E+ +DI AT ++IE+
Sbjct:   70 RMTLEVNGDSRTAQPDAMEVPDYPVGVDK-----LNVVLTHTTADFDSLAAAVGLARVWQSEQPHIPCYVCLPRGSHPNVAHFLALHKNLFPVIALKDVSADQVHRVGLVDAQRKDRVGPAETLLDTAEESCANLRHVCHVCSADMCCNGGQWRGAKVHVFDHHFEKTSDIAATKLVIEK 244
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BLAST of mRNA_H-elongata_contig1827.4901.1 vs. uniprot
Match: W7U1M5_9STRA (Polynucleotide adenylyltransferase region n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1M5_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.710e-31
Identity = 67/125 (53.60%), Postives = 86/125 (68.80%), Query Frame = 1 
Query:  778 DSPRPQALNVVLTHTMADFDGLAAAVGLAKLWQDERPQDECCVCIPRGAHPVVKRFLALHKNFFPIKALRDINHDQIFRVGLVDAQRMDRLGAAVSLLRNASEVVVVDHHVEQHTDINATTIIIE 1152
            +S  PQA+NVVLTH +ADFD LAAAVGLAK W  + P+ E  VC+P+GAHP V+ FLALH   FP++AL  I+   + ++G+VDA   DRLGA   LL +A EV V DHH  +  DI AT + +E
Sbjct:  113 ESATPQAINVVLTHAIADFDSLAAAVGLAKYWSHQNPETEAYVCMPQGAHPSVEAFLALHSVLFPLRALGTIDPSHVHKLGVVDASTKDRLGAGQGLLASAREVHVFDHHAMKVPDIEATALNLE 237
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BLAST of mRNA_H-elongata_contig1827.4901.1 vs. uniprot
Match: A0A7S2DI80_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DI80_9EUKA)

HSP 1 Score: 118 bits (296), Expect = 4.130e-28
Identity = 62/117 (52.99%), Postives = 76/117 (64.96%), Query Frame = 1 
Query:  802 NVVLTHTMADFDGLAAAVGLAKLWQDERPQDECCVCIPRGAHPVVKRFLALHKNFFPIKALRDINHDQIFRVGLVDAQRMDRLGAAVSLLRNASEVVVVDHHVEQHTDINATTIIIE 1152
            NVVLTHT ADFD LA AV LAKLW  ERP     V  PRG +P+V RFLA HK+  P++  + I  + I  VG+VD Q +DR+G A S ++ A  VVVVDHH+    DI A  +IIE
Sbjct:   64 NVVLTHTNADFDSLAGAVALAKLWSIERPGLPTHVVTPRGVNPLVARFLAYHKHLLPLRGFKTIRAEDISAVGVVDTQSVDRVGPAASWIQVAEHVVVVDHHMGTSGDIEADELIIE 180
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BLAST of mRNA_H-elongata_contig1827.4901.1 vs. uniprot
Match: A0A7S3RIA0_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RIA0_9SPIT)

HSP 1 Score: 122 bits (305), Expect = 4.990e-27
Identity = 61/117 (52.14%), Postives = 78/117 (66.67%), Query Frame = 1 
Query:  802 NVVLTHTMADFDGLAAAVGLAKLWQDERPQDECCVCIPRGAHPVVKRFLALHKNFFPIKALRDINHDQIFRVGLVDAQRMDRLGAAVSLLRNASEVVVVDHHVEQHTDINATTIIIE 1152
            NVVLTHT  DFD LAAAV LAKLW  ERP+    V +PRG +P+V RFLA HK+  P++    IN + +  VG+VD Q  DRLG A + L +AS V V DHH+E   DI+A  +++E
Sbjct:   53 NVVLTHTNTDFDSLAAAVALAKLWGLERPELPTHVVLPRGVNPLVARFLAYHKHLLPVRGFSTINPEDLHAVGIVDTQSRDRLGPAAAWLSHASHVAVYDHHLEVSGDISADELVLE 169
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BLAST of mRNA_H-elongata_contig1827.4901.1 vs. uniprot
Match: A0A6V0CJI4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6V0CJI4_9STRA)

HSP 1 Score: 120 bits (300), Expect = 8.650e-26
Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 1 
Query:  802 NVVLTHTMADFDGLAAAVGLAKLWQD-ERPQD-------------------ECCVCIPRGAHPVVKRFLALHKNFFPIKALRDINHD--QIFRVGLVDAQRMDRLGAAVSLLRNASEVVVVDHHVEQHTDINATT 1140
            NVVLTH  ADFD LA+AVGLAKLW +  RP+D                      V +PRGAHP V+RFLALHK+ FPI++L+ + +D  ++ R+ LVDAQR +R+G A  L+++A+ V VVDHHV+Q +DI   T
Sbjct:  254 NVVLTHCTADFDSLASAVGLAKLWTNTNRPEDYDGDEHDDEEDYDSSFDNYPTFVVLPRGAHPAVQRFLALHKHLFPIRSLKSLPNDLSKLHRLALVDAQRKERIGPADVLIQHANRVTVVDHHVDQDSDIPGIT 388
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BLAST of mRNA_H-elongata_contig1827.4901.1 vs. uniprot
Match: A0A7S3SW41_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SW41_EMIHU)

HSP 1 Score: 110 bits (276), Expect = 4.710e-25
Identity = 57/117 (48.72%), Postives = 73/117 (62.39%), Query Frame = 1 
Query:  802 NVVLTHTMADFDGLAAAVGLAKLWQDERPQDECCVCIPRGAHPVVKRFLALHKNFFPIKALRDINHDQIFRVGLVDAQRMDRLGAAVSLLRNASEVVVVDHHVEQHTDINATTIIIE 1152
            NVVLTHT  DFD LAAAV LA+LW  +RP+    V +PRG +P+V RFLA HK+  P++    IN   +  VG+VD Q  +RLG A   L  AS V V DHHV+   +I    ++IE
Sbjct:   59 NVVLTHTNTDFDSLAAAVALARLWSYQRPEVPTHVVMPRGVNPLVARFLAYHKHLLPVRGFSTINPSDLRAVGVVDTQTRERLGPAARWLDCASYVAVYDHHVDNTPNIQHDELVIE 175
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BLAST of mRNA_H-elongata_contig1827.4901.1 vs. uniprot
Match: C1N3D7_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N3D7_MICPC)

HSP 1 Score: 117 bits (292), Expect = 6.030e-25
Identity = 66/120 (55.00%), Postives = 83/120 (69.17%), Query Frame = 1 
Query:  799 LNVVLTHTMADFDGLAAAVGLAKLWQDERPQDEC-CVCIPRGAHPVVKRFLALHKNFFPIKALRDINHDQIFRVGLVDAQRMDRLGAAVSLLRNASEVVVVDHHVEQHTDINATTIIIEQ 1155
            L VVLTH  ADFD L++AVGLAKL +D R   +C CV +PRGA P V  +LALHKN FPIK  R ++  ++  VG+VDAQR DRL    S L +A +VVVVDHH    +DI+AT  II++
Sbjct:   69 LGVVLTHVSADFDTLSSAVGLAKL-RDHRLGAQCTCVVLPRGASPGVSHYLALHKNKFPIKEFRAVDASRLEWVGVVDAQRRDRLADCASWLDDAKDVVVVDHHALATSDIDATERIIQE 187
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BLAST of mRNA_H-elongata_contig1827.4901.1 vs. uniprot
Match: A0A448ZLP7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLP7_9STRA)

HSP 1 Score: 117 bits (292), Expect = 9.280e-25
Identity = 66/137 (48.18%), Postives = 85/137 (62.04%), Query Frame = 1 
Query:  802 NVVLTHTMADFDGLAAAVGLAKLWQD-ERPQDE---------------------CCVCIPRGAHPVVKRFLALHKNFFPIKALRDINHD--QIFRVGLVDAQRMDRLGAAVSLLRNASEVVVVDHHVEQHTDINATT 1140
            NVVLTH  ADFD LA+AVGLAKLW +  RP  +                       V +PRGAHP V+RFLALHK+ FPI++L+ +  D  ++ R+ LVDAQR +R+G A  LL++A  V VVDHHV+Q +DI   T
Sbjct:  234 NVVLTHCTADFDSLASAVGLAKLWTNTNRPDGDETDDXXXXXXDTYDSSLDNYPTFVVLPRGAHPAVQRFLALHKHLFPIRSLKSLPKDLSKLHRLALVDAQRKERIGPADVLLKHADRVTVVDHHVDQDSDIPGIT 370
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BLAST of mRNA_H-elongata_contig1827.4901.1 vs. uniprot
Match: A0A0M0J8D6_9EUKA (Polya polymerase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J8D6_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 1.170e-24
Identity = 61/120 (50.83%), Postives = 75/120 (62.50%), Query Frame = 1 
Query:  793 QALNVVLTHTMADFDGLAAAVGLAKLWQDERPQDECCVCIPRGAHPVVKRFLALHKNFFPIKALRDINHDQIFRVGLVDAQRMDRLGAAVSLLRNASEVVVVDHHVEQHTDINATTIIIE 1152
            +A NVVLTHT  DFD LA AV LAKLW  ERP+    V +PRG +P+V RFLA HK+  PI+  + I    I  +G+VD Q  +RLG A + L NAS V V DHH     DIN T + +E
Sbjct:   40 EACNVVLTHTNTDFDSLAGAVALAKLWSIERPEVPTHVVMPRGVNPLVGRFLAYHKHLLPIRGFKTIRAVDIGAIGVVDTQSANRLGPAAAWLENASHVAVYDHHSCVDGDINPTELHLE 159
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1827.4901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ45_ECTSI5.920e-5779.84Phosphoesterase, RecJ-like protein n=2 Tax=Ectocar... [more]
A0A835YMN8_9STRA1.950e-3448.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U1M5_9STRA2.710e-3153.60Polynucleotide adenylyltransferase region n=2 Tax=... [more]
A0A7S2DI80_9EUKA4.130e-2852.99Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S3RIA0_9SPIT4.990e-2752.14Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A6V0CJI4_9STRA8.650e-2648.89Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S3SW41_EMIHU4.710e-2548.72Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
C1N3D7_MICPC6.030e-2555.00Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A448ZLP7_9STRA9.280e-2548.18Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A0M0J8D6_9EUKA1.170e-2450.83Polya polymerase n=1 Tax=Chrysochromulina tobinii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1827contigH-elongata_contig1827:228..4646 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.1
Seed ortholog evalue2.8e-50
Seed eggNOG ortholog2880.D8LQ45
EggNOG free text desc.DHH family
EggNOG OGs2R7NG@2759,COG0618@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons6
Model size1157
Cds size1074
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930050.5192997-CDS-H-elongata_contig1827:227..2961622930050.5192997-CDS-H-elongata_contig1827:227..296Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 228..296 -
1691679261.4629624-CDS-H-elongata_contig1827:227..2961691679261.4629624-CDS-H-elongata_contig1827:227..296Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 228..296 -
1622930050.5397754-CDS-H-elongata_contig1827:834..9151622930050.5397754-CDS-H-elongata_contig1827:834..915Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 835..915 -
1691679261.4732535-CDS-H-elongata_contig1827:834..9151691679261.4732535-CDS-H-elongata_contig1827:834..915Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 835..915 -
1622930050.5569584-CDS-H-elongata_contig1827:1461..15711622930050.5569584-CDS-H-elongata_contig1827:1461..1571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 1462..1571 -
1691679261.481888-CDS-H-elongata_contig1827:1461..15711691679261.481888-CDS-H-elongata_contig1827:1461..1571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 1462..1571 -
1622930050.575855-CDS-H-elongata_contig1827:2186..22861622930050.575855-CDS-H-elongata_contig1827:2186..2286Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 2187..2286 -
1691679261.4946918-CDS-H-elongata_contig1827:2186..22861691679261.4946918-CDS-H-elongata_contig1827:2186..2286Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 2187..2286 -
1622930050.5913925-CDS-H-elongata_contig1827:2757..34031622930050.5913925-CDS-H-elongata_contig1827:2757..3403Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 2758..3403 -
1691679261.505317-CDS-H-elongata_contig1827:2757..34031691679261.505317-CDS-H-elongata_contig1827:2757..3403Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 2758..3403 -
1622930050.6061203-CDS-H-elongata_contig1827:4497..45651622930050.6061203-CDS-H-elongata_contig1827:4497..4565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 4498..4565 -
1691679261.5135658-CDS-H-elongata_contig1827:4497..45651691679261.5135658-CDS-H-elongata_contig1827:4497..4565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1827 4498..4565 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930050.6183875-UTR-H-elongata_contig1827:4565..46461622930050.6183875-UTR-H-elongata_contig1827:4565..4646Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1827 4566..4646 -
1691679261.521516-UTR-H-elongata_contig1827:4565..46461691679261.521516-UTR-H-elongata_contig1827:4565..4646Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1827 4566..4646 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1827.4901.1prot_H-elongata_contig1827.4901.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1827 228..4565 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1827.4901.1

>prot_H-elongata_contig1827.4901.1 ID=prot_H-elongata_contig1827.4901.1|Name=mRNA_H-elongata_contig1827.4901.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=358bp
MTVWSDMFPRLAVVFFVIVQAASRTLGYNHCHYYCDYRCPPRAAKGGGNW
SPYSWSKLSNRENPRPLEHNSKKGGSYRDIEIRRRYSRHNDLVDTGTINS
IRVSPRHSPTARSWAGRSCSSRASSVPIGDDREGCTSRNSLERAGVPVLS
SSNYGDGERRGARAIEARTKMTVGDEWGDMEGVRKMRKETERSGGRVKDA
TDADTTGQSRATRMDLPVPSLSRTTPPTPTGQDSPRPQALNVVLTHTMAD
FDGLAAAVGLAKLWQDERPQDECCVCIPRGAHPVVKRFLALHKNFFPIKA
LRDINHDQIFRVGLVDAQRMDRLGAAVSLLRNASEVVVVDHHVEQHTDIN
ATTIIIEQ
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mRNA from alignment at H-elongata_contig1827:228..4646-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1827.4901.1 ID=mRNA_H-elongata_contig1827.4901.1|Name=mRNA_H-elongata_contig1827.4901.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4419bp|location=Sequence derived from alignment at H-elongata_contig1827:228..4646- (Himanthalia elongata Himel1 dioecious)
AGGAGTGCTTCATTTTCTTGACGTTAAGTCCATGGTTACTTAGTCTAGAG
TTGTGGCAGCAGACGTTGCGCTCTAGAAACAATGACAGTGTGGTCCGACA
TGTTCCCGAGATTGGCGGTGGTGTTTTTCGTGATCGTTCAAGCTGCCAGG
TGAGTCAAAAGGTTACACACAAGAGGATAATCTGGCCATCTCCGCCAAGC
AGCCTATTATAGTTCCTCCATTCCCCTCTTCCATGTGGATGGCTGTATCA
GCTAAATATACAGTAAAAACTACCAATGGGAGAATGTGTGCAGTAGCTTA
AAGCAATTTTCCACTCCCTCGTCACGAAAGTCTGGAAAAGCATTTACCGC
AGCTGGAGTGGGTACGTGAACAAGTCAAAAGTGGAAGTACCGCGCATGGT
TTGCAGCCTCCAGTTTCGAGTACAGACTGCACATGACAGCAATATAAACT
TCAAGTTCATCTCATGGCGATATCTAGACCCCAAAACCAACATCACGACA
ACCTGGTGTGCAGTAGAGAGAGGAAGGCAGCAGGAGATAAATATGATCGA
AATATAGTCTAGAGCTACTCTTATGTCCAGGGAGAGTTCAGGGGCAAAGG
CCAACATTTACCGTTACACATTCGAAGCGATTAGTTCTGGCCCACCATTT
CGAATGTCGTTAAGAGATATCATACTTCCGTTGTAGATAATGTTGTAGTT
CAACGTCGTCCGGTCCCCGCAACCATCAACAGTAGTGGGTAGGGCCTTGT
TGGCCGCTATAATAGTAAGCACAGCAGATTGATACAAGTGTGTAGGTGGT
GCTGAACATGAGCCCATCGCAACGCCAAGGCTAGGGCGGTCAGCTTGACC
TTACTATATCATATATAACACAATTGTCAGATGTGCGCCACCGACTTGGT
CGATTCAAGACGTGCGGTTCTTGATGCCCATCCTCAGTGCAGTAGCTCGA
CTCCGGCATTTTCCACAACGTACCGTAACCCACCCCCCCCTCCCTCGAGC
AACACCATCGAAGCGAGGTCAGCATTCCCGTCATGATAACATCCTGATGT
AAATAGAAACCCTCATTTCATTTCTGTGTATTGTACGAATATCTAGGTTT
TACTATACTACGAATACTATTTCAGAGTGCTTTTGTTTTCTTTTTTGTAT
AATATAAAACCTAGTCTCGAACCTCACGCTCGCTAATGCCTTCCGCACGG
TACACGCCAATTCGCCGCTCACAATTCCCCGCACGTGTCGCAGCCGCACC
CTGGGCTACAACCACTGCCATTACTACTGTGACTACAGATGCCCGCCGCG
AGCGGCCAAGGGTGGCGGCAACTGGTCCCCTTACTCTTGGAGCAAGCTTT
CGAATCGGGAGAATCCACGACCACTGGAACATAATTCGAAAAAGGGAGGA
AGTTATCGCGACATCGAAATCAGGCGGCGTTATTCCAGGCATAATGATTT
GGTAGATACTGGTACTATTAATAGTATACGCGTTAGCCCCCGCCATTCAC
CAACGGCGAGATCGTGGGCCGGGCGTAGCTGCAGCTCTAGGGCGAGCTCG
GTTCCAATCGGTGATGACCGCGAAGGTTGTACATCCCGTAATAGCCTCGA
GAGGGCTGGAGTTCCAGTTCTAAGTTCTAGTAATTATGGGGACGGGGAGA
GGCGAGGGGCGCGCGCGATAGAAGCGCGAACAAAGATGACCGTGGGGGAC
GAATGGGGGGACATGGAAGGCGTGAGAAAGATGCGAAAGGAAACGGAGAG
ATCGGGAGGTCGGGTGAAGGATGCCACGGATGCGGATACTACCGGGCAAA
GTCGGGCTACGCGCATGGATCTCCCAGTACCATCACTCTCACGAACCACA
CCACCCACACCGACGGGGCAAGACTCTCCTCGCCCTCAGGTATCATCGCC
TGGCTCGAGAGGTATCGAGGCACTTAGGGGCTACCGATGACATATTCATC
TGGCCACGTGTATAAAGGATGCCTACTCTAGTACTAAAATAGGTAGCATA
TAGTTGTGCATGATATGGGGTACAGACTGCGGTGGGGGTAAACATCGTTA
CAGTTGGTGCTCGTTACTTTAAAGTATATACCTTAAAGTATATTGCAAAT
ACCCATAATGTATACTGCATGCCCGAGTGCTGCAAGATGCATGTGTTTGT
GTGTGTGTGTGTGTGTGGTCGTAAGGTTAGCTTCAGCCATGCCTTCTACT
GTACTGTATCTATTAGCGCCTTCTACGTATGCTGATCCGGTATCATCCTG
GACACCGAAAGATTAAAAGAGAAAAGACCGAGAAAAAAACAACTCGAACC
CCGCTGGGTGCAATTAAAGTACCCGAACGAACGAATGAAGCGTCTCGTTT
CCGACGACAGGCCCTGAATGTGGTTCTGACACACACGATGGCAGATTTCG
ACGGCCTTGCGGCGGCAGTGGGACTGGCGAAGCTTTGGCAAGACGAGCGC
CCACAAGACGGTGAGGGTCGGGGGGTAAGAGTGAGAAAAACAGCATTAGT
CTGCAGGCTTATGGAAGGTATTGATTCTTGTCTGTGTCATTCGGTTGGGG
TTTTGTAACCGCGGCACGCGTTTTCGTCCGCACGCGCCTCATGTCGAGCA
TTGGACTCTACACCGTCATCATCCACAAGAACTTCAAGATCATGTATGTG
TGTGTGGCCTCCAACGTTGCCAGGCTAAATTGGAGGAGGGTCTGCCGTAG
GAGACTCGAGGGTGCCGTTATGCCTTTCTTTGGTCAAAGGCACCGCCACA
TCTAGGGCAGTAGATTATATACAGTAGTAGATATAATTGATGTCTAGATG
GCCTACCGACGCAAAACATAAATCAAGCGCTGTTAAATTGAATAGCGATG
TCGAAGATTGCCGTGACTTTGGAGCTTAGAGAGCTCGATATCCCAACAGC
TTTACGTATCGCTTCAGGACATTTTTTTCCGGTAAATAGTAACGGTAGAT
AGAACCGTGAAGATTCACGCCGCATCGACCGGGGGATCGTTGACGATAAC
AGACCCGCCTCGGAACCGCGCTCGCCGTTGCCCTCCTTTAACTCGATCTC
CGTGTGCTGTTCTCTCGGAGGGAAGAGTGCTGTGTATGTATTCCCCGAGG
CGCACACCCTGTTGTCAAACGCTTCCTAGCTCTCCACAAGAACTTCTTCC
CCATCAAGGCGCTGAGGGACATCAATCACGACCAGGCGAGTTTTGTCGTA
CAATAGTTTGTCTACACAACACATGGCAAAATTGGAATTCCCGATAGATG
AAGAGCTGGCGTTTTTTCAAGCGTTTGGATTGGACAGAGAAGGCGCGCCC
GACAGGATTGATGTAATAACCGCCCATGCTTGGTATATTATTGATGGGCT
GGTACAAGACGTATGTTTCGCGGTGCACGGGATGCTTGACGCGGCATACT
ATGAAGCTGTCGTATCTTCATGAGATGGGATCATCGCGTTCCCTTCGAAT
CTCAGACACATGCTTACACGATCCTTTGAAGACTCTCTTCGACAATGTAA
GAGTGTATAATCAATCGTGCAATGCTTCGACATTTAAAGAATCCGTGTTG
CCATGCATACGATGCTACAGTGTTCGTCTCCCGTACTACAGAAGGCTGGT
AATTTTAACGACGAGGGTGTCAGTAGGTTTATCGTTGGAGTCGTTCGAGC
TGTATGATGTATCATGAAGACTGTTACTATTATCCGTGTTTGTGTGTTTG
TGTCCTGAACGCATGCGCGAGGAATCTTCAGATATTCCGGGTTGGCCTCG
TCGACGCTCAGAGGATGGACAGGCTAGGTGCCGCTGTATCCCTCCTGCGC
AACGCCTCAGAGGTGCTATGAAGAGCCTTCTGTTCGCGGTGTGCCGTACT
GATTTATGTATACTTTACTGCTTTTAGTTTGGCTATATAACGACCATAAC
GATTATCGTCGTCTGGAACTCCTTTTGAAACTATTGAGACACGTCGGATC
CGCAGACAGAAACGTTTGATGAAAATATATACGGTATTATACATTGATAG
ACCGTACATAGTTTGAACCGTGACCGCTTCCTTTACGTCGTCCAGTCAAA
TGTATATAAACAATTATACTCGTATATATATGGTAAGCAAGTATCCACGG
GAATGATAATCGTTAACATAAAGCTAATTGCTTCGCTCGGCGACGTGACA
CGATTCTGTCCGTAGCGTCAATTGAGGGGTTAACGGTGATCGATGGCCCG
ACCTCAAGTCTTGTCCTGTGGTGGATCTTCTGCTGCTCAACACCTGAGTG
CAGATGCGCGTAAATGAAAATACCTTTACGATTTACGGCCGTGGCAGTCA
TCTCTCCCCACCCTCATCGTTCTTCTCTACTGGCGATGACGGTGGTGCAG
GTCGTTGTGGTGGACCATCATGTGGAGCAACATACGGACATCAACGCGAC
CACGATAATCATAGAACAG
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Coding sequence (CDS) from alignment at H-elongata_contig1827:228..4646-

>mRNA_H-elongata_contig1827.4901.1 ID=mRNA_H-elongata_contig1827.4901.1|Name=mRNA_H-elongata_contig1827.4901.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2148bp|location=Sequence derived from alignment at H-elongata_contig1827:228..4646- (Himanthalia elongata Himel1 dioecious)
ATGACAGTGTGGTCCGACATGTTCCCGAGATTGGCGGTGGTGTTTTTCGT
GATCGTTCAAGCTGCCAGATGACAGTGTGGTCCGACATGTTCCCGAGATT
GGCGGTGGTGTTTTTCGTGATCGTTCAAGCTGCCAGCCGCACCCTGGGCT
ACAACCACTGCCATTACTACTGTGACTACAGATGCCCGCCGCGAGCGGCC
AAGGGTGGCGGCAACTGGTCCCCTTACTCTTGGAGCAAGCTTTCGAATCG
GGAGAATCCACGACCACTGGAACATAATTCGAAAAAGGGAGGAAGTTATC
GCGACATCGAAATCAGGCGGCGTTATTCCAGGCATAATGATTTGGTAGAT
ACTGGTACTATTAATAGTATACGCGTTAGCCCCCGCCATTCACCAACGGC
GAGATCGTGGGCCGGGCGTAGCTGCAGCTCTAGGGCGAGCTCGGTTCCAA
TCGGTGATGACCGCGAAGGTTGTACATCCCGTAATAGCCTCGAGAGGGCT
GGAGTTCCAGTTCTAAGTTCTAGTAATTATGGGGACGGGGAGAGGCGAGG
GGCGCGCGCGATAGAAGCGCGAACAAAGATGACCGTGGGGGACGAATGGG
GGGACATGGAAGGCGTGAGAAAGATGCGAAAGGAAACGGAGAGATCGGGA
GGTCGGGTGAAGGATGCCACGGATGCGGATACTACCGGGCAAAGTCGGGC
TACGCGCATGGATCTCCCAGTACCATCACTCTCACGAACCACACCACCCA
CACCGACGGGGCAAGACTCTCCTCGCCCTCAGCCGCACCCTGGGCTACAA
CCACTGCCATTACTACTGTGACTACAGATGCCCGCCGCGAGCGGCCAAGG
GTGGCGGCAACTGGTCCCCTTACTCTTGGAGCAAGCTTTCGAATCGGGAG
AATCCACGACCACTGGAACATAATTCGAAAAAGGGAGGAAGTTATCGCGA
CATCGAAATCAGGCGGCGTTATTCCAGGCATAATGATTTGGTAGATACTG
GTACTATTAATAGTATACGCGTTAGCCCCCGCCATTCACCAACGGCGAGA
TCGTGGGCCGGGCGTAGCTGCAGCTCTAGGGCGAGCTCGGTTCCAATCGG
TGATGACCGCGAAGGTTGTACATCCCGTAATAGCCTCGAGAGGGCTGGAG
TTCCAGTTCTAAGTTCTAGTAATTATGGGGACGGGGAGAGGCGAGGGGCG
CGCGCGATAGAAGCGCGAACAAAGATGACCGTGGGGGACGAATGGGGGGA
CATGGAAGGCGTGAGAAAGATGCGAAAGGAAACGGAGAGATCGGGAGGTC
GGGTGAAGGATGCCACGGATGCGGATACTACCGGGCAAAGTCGGGCTACG
CGCATGGATCTCCCAGTACCATCACTCTCACGAACCACACCACCCACACC
GACGGGGCAAGACTCTCCTCGCCCTCAGGCCCTGAATGTGGTTCTGACAC
ACACGATGGCAGATTTCGACGGCCTTGCGGCGGCAGTGGGACTGGCGAAG
CTTTGGCAAGACGAGCGCCCACAAGACGGCCCTGAATGTGGTTCTGACAC
ACACGATGGCAGATTTCGACGGCCTTGCGGCGGCAGTGGGACTGGCGAAG
CTTTGGCAAGACGAGCGCCCACAAGACGAGTGCTGTGTATGTATTCCCCG
AGGCGCACACCCTGTTGTCAAACGCTTCCTAGCTCTCCACAAGAACTTCT
TCCCCATCAAGGCGCTGAGGGACATCAATCACGACCAGAGTGCTGTGTAT
GTATTCCCCGAGGCGCACACCCTGTTGTCAAACGCTTCCTAGCTCTCCAC
AAGAACTTCTTCCCCATCAAGGCGCTGAGGGACATCAATCACGACCAGAT
ATTCCGGGTTGGCCTCGTCGACGCTCAGAGGATGGACAGGCTAGGTGCCG
CTGTATCCCTCCTGCGCAACGCCTCAGAGATATTCCGGGTTGGCCTCGTC
GACGCTCAGAGGATGGACAGGCTAGGTGCCGCTGTATCCCTCCTGCGCAA
CGCCTCAGAGGTCGTTGTGGTGGACCATCATGTGGAGCAACATACGGACA
TCAACGCGACCACGATAATCATAGAACAGGTCGTTGTGGTGGACCATCAT
GTGGAGCAACATACGGACATCAACGCGACCACGATAATCATAGAACAG
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