prot_H-elongata_contig182634.4899.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig182634.4899.1
Unique Nameprot_H-elongata_contig182634.4899.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
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BLAST of mRNA_H-elongata_contig182634.4899.1 vs. uniprot
Match: D8LKU0_ECTSI (Dymeclin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU0_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 7.030e-20
Identity = 54/89 (60.67%), Postives = 59/89 (66.29%), Query Frame = 0 
Query:    1 LRQANPGFLRAAVVRSDADALLLPLLRTLNDCPSSAVARGERDHPRRQQQQ-----NVRTSSPTLYVPAIVVLLYSQDAAFDRQSFRQV 84
            L QANPGFLRAAVVRSDADALLLPLLRTL+DC S                       V  S P LYVPAIV+LL+ QD+AF+RQSFRQV
Sbjct:  241 LLQANPGFLRAAVVRSDADALLLPLLRTLHDCASPEQXXXXXXXXXXXXXXXXXXVGVDPSPPALYVPAIVLLLFCQDSAFNRQSFRQV 329
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BLAST of mRNA_H-elongata_contig182634.4899.1 vs. uniprot
Match: A0A6H5L5B7_9PHAE (Dymeclin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5B7_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 2.500e-19
Identity = 53/90 (58.89%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 LRQANPGFLRAAVVRSDADALLLPLLRTLNDCPSSA------VARGERDHPRRQQQQNVRTSSPTLYVPAIVVLLYSQDAAFDRQSFRQV 84
            L QANPGFLRAAVVRSDADALLLPLLRTL+DC S                           S P+LYVPAIV+LL+ QD+AF+RQSFRQV
Sbjct:  677 LLQANPGFLRAAVVRSDADALLLPLLRTLHDCASPEQXXXXXXXXXXXXXXXXXXXXXXXPSPPSLYVPAIVLLLFCQDSAFNRQSFRQV 766
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig182634.4899.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKU0_ECTSI7.030e-2060.67Dymeclin n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5L5B7_9PHAE2.500e-1958.89Dymeclin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF09742Dymeclincoord: 3..78
e-value: 2.3E-7
score: 29.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig182634contigH-elongata_contig182634:70..321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig182634.4899.1mRNA_H-elongata_contig182634.4899.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig182634 70..321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig182634.4899.1 ID=prot_H-elongata_contig182634.4899.1|Name=mRNA_H-elongata_contig182634.4899.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
LRQANPGFLRAAVVRSDADALLLPLLRTLNDCPSSAVARGERDHPRRQQQ
QNVRTSSPTLYVPAIVVLLYSQDAAFDRQSFRQV
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