mRNA_H-elongata_contig182357.4889.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig182357.4889.1 vs. uniprot
Match: D7G3K9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K9_ECTSI) HSP 1 Score: 212 bits (539), Expect = 4.100e-67 Identity = 104/126 (82.54%), Postives = 110/126 (87.30%), Query Frame = 1
Query: 28 LLYPIEQGGGVLESDECAMYFVNFSLDIAIGTFVIWCFVRVQELAARRFGISSLKVTGDYGTPPLFSVYRTQLLAYMLILVICKAVTTAIVITMDEVLSSLANALFRPVRNYPELELTIVMIFCPW 405
+L I +GGG+ SDECAMYFVNFSLDIAIGTF+IWCFVRVQEL A R GI SLKVTGDYGTPPLFSVYRTQLLAY +ILVICKAVTTAIVI MDEVLSSLA ALF PV YPELELT+VMI CPW
Sbjct: 77 ILLSIHEGGGIPGSDECAMYFVNFSLDIAIGTFMIWCFVRVQELTAVRCGIDSLKVTGDYGTPPLFSVYRTQLLAYTVILVICKAVTTAIVIAMDEVLSSLAKALFSPVSAYPELELTLVMIICPW 202
BLAST of mRNA_H-elongata_contig182357.4889.1 vs. uniprot
Match: A0A836CKC4_9STRA (Vacuolar membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKC4_9STRA) HSP 1 Score: 127 bits (319), Expect = 5.090e-34 Identity = 62/121 (51.24%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 43 EQGGGVLESDECAMYFVNFSLDIAIGTFVIWCFVRVQELAARRFGISSLKVTGDYGTPPLFSVYRTQLLAYMLILVICKAVTTAIVITMDEVLSSLANALFRPVRNYPELELTIVMIFCPW 405
+QG SDECA+YFVN+++DI +GT +IW V+ Q A+R G+ SL+ TG YG PP SVY QLLA+M ILVI K +VI +D + +A LF P++ YP+LEL IVMI CPW
Sbjct: 81 DQGDDA--SDECALYFVNYAVDILLGTGLIWGLVQAQVTMAKRLGVGSLRHTGFYGDPPRLSVYLAQLLAFMFILVIQKTALAFLVIALDGQIEVMAEFLFLPLQGYPDLELLIVMILCPW 199
BLAST of mRNA_H-elongata_contig182357.4889.1 vs. uniprot
Match: A0A836CED2_9STRA (Vacuolar membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED2_9STRA) HSP 1 Score: 126 bits (317), Expect = 6.520e-34 Identity = 58/118 (49.15%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 52 GGVLESDECAMYFVNFSLDIAIGTFVIWCFVRVQELAARRFGISSLKVTGDYGTPPLFSVYRTQLLAYMLILVICKAVTTAIVITMDEVLSSLANALFRPVRNYPELELTIVMIFCPW 405
G DECA+YFV F+LD+ +G ++W +R QE ARR+ SL ++GDYG PP F + Q+ YML +V K V T +V+ D VLS ++ LF PVR +PE ELTIVMI CPW
Sbjct: 83 GVAAPRDECALYFVQFALDVLLGVALVWVLIRTQERLARRYNWPSLAISGDYGNPPRFQWFVAQMGVYMLSVVAVKTVITLVVLAGDAVLSDVSAVLFAPVREFPEAELTIVMIICPW 200
BLAST of mRNA_H-elongata_contig182357.4889.1 vs. uniprot
Match: A0A835YS54_9STRA (Vacuolar membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS54_9STRA) HSP 1 Score: 120 bits (302), Expect = 9.980e-31 Identity = 56/121 (46.28%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 43 EQGGGVLESDECAMYFVNFSLDIAIGTFVIWCFVRVQELAARRFGISSLKVTGDYGTPPLFSVYRTQLLAYMLILVICKAVTTAIVITMDEVLSSLANALFRPVRNYPELELTIVMIFCPW 405
+E D CA+YFV F LD+ +G +IW VR QE A R + SL V+GDYG PP + QL AYM+ L+I K + + +V+ D +LS L+ LF PV +P++ELTIVMI CPW
Sbjct: 66 RANADAVERDACALYFVQFVLDMMLGMVMIWAMVRTQEWLAERCNVPSLAVSGDYGNPPKVQWFWHQLGAYMMSLLIIKTIISTVVVAEDRILSRLSTWLFSPVAKHPDVELTIVMIVCPW 186
BLAST of mRNA_H-elongata_contig182357.4889.1 vs. uniprot
Match: A0A0P1ATD2_PLAHL (Phosphatidylinositol-3,5-bisphosphate 3-phosphatase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATD2_PLAHL) HSP 1 Score: 110 bits (276), Expect = 1.310e-25 Identity = 55/132 (41.67%), Postives = 82/132 (62.12%), Query Frame = 1
Query: 10 VFIVIFLLYPIEQGGGVLES-DECAMYFVNFSLDIAIGTFVIWCFVRVQELAARRFGISSLKVTGDYGTPPLFSVYRTQLLAYMLILVICKAVTTAIVITMDEVLSSLANALFRPVRNYPELELTIVMIFCP 402
+FI I L E V S D+CA+YFVNF+LD G F+ + + L A RF SSLK GDYGTPP + TQ+++++L++ +CK + +++ + L + A LF+P+ +YP++ELTIVMI CP
Sbjct: 832 LFIAIVLYSYQEDMHSVGHSVDQCALYFVNFTLDTTFGIFLNYVLLSAVVLLALRFNWSSLKKPGDYGTPPRVRTWVTQVISWILVIFVCKILIAVVIVAFQKPLGAFAALLFKPLDSYPDVELTIVMIACP 963
BLAST of mRNA_H-elongata_contig182357.4889.1 vs. uniprot
Match: A0A6G0WLM6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLM6_9STRA) HSP 1 Score: 104 bits (259), Expect = 6.670e-25 Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 1
Query: 64 ESDECAMYFVNFSLDIAIGTFVIWCFVRVQELAARRFGISSLKVTGDYGTPPLFSVYRTQLLAYMLILVICKAVTTAIVITMDEVLSSLANALFRPVRNYPELELTIVMIFCP 402
+DECAMYF+NF+LD +IG + W F+R+ L ARRF ++L+ GDYG P V+ QLLA+++I+V K V +I L A+ +F+P+ +P +EL +VM+ CP
Sbjct: 84 STDECAMYFINFTLDTSIGVLLNWLFLRLLVLLARRFKWTALQTPGDYGDPVRVRVWIIQLLAWLIIIVSAKLVIGRFIILFQHSLVEFAHGMFQPLEQHPRVELVLVMVACP 196
BLAST of mRNA_H-elongata_contig182357.4889.1 vs. uniprot
Match: D0N4K7_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N4K7_PHYIT) HSP 1 Score: 105 bits (261), Expect = 7.990e-25 Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 1
Query: 10 VFIVIFLL-YPIEQGGGVLESDECAMYFVNFSLDIAIGTFVIWCFVRVQELAARRFGISSLKVTGDYGTPPLFSVYRTQLLAYMLILVICKAVTTAIVITMDEVLSSLANALFRPVRNYPELELTIVMIFCP 402
+FI I L Y E G D+CA+YFVNF+LD +G F+ + + L A RF SSLK GDYGTP + Q+L+++L++ CK + +++ + L + A LF+P+ ++P++EL IVMI CP
Sbjct: 70 LFIAIVLFNYQKEMESGEESVDQCALYFVNFTLDTTLGVFLNYVLLSAVVLLALRFSWSSLKTPGDYGTPVRVRTWILQVLSWILVIFTCKFLIALLIVAFQKPLGAFAVLLFKPLADHPDVELAIVMIACP 201
BLAST of mRNA_H-elongata_contig182357.4889.1 vs. uniprot
Match: A0A2D4BU66_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU66_PYTIN) HSP 1 Score: 105 bits (261), Expect = 9.250e-25 Identity = 49/131 (37.40%), Postives = 76/131 (58.02%), Query Frame = 1
Query: 16 IVIFLLYPIEQG--GGVLESDECAMYFVNFSLDIAIGTFVIWCFVRVQELAARRFGISSLKVTGDYGTPPLFSVYRTQLLAYMLILVICKAVTTAIVITMDEVLSSLANALFRPVRNYPELELTIVMIFCP 402
++ +LY E G G D+CA YFVNF++D +G W F+ + A RF +SL GDYG P S++ QL++++ I+ + K V +++ +++ L LA LF P++ YP +EL IVMI CP
Sbjct: 74 LIAIMLYQYEHGHGSGTTGVDQCAFYFVNFTMDTTVGVLFNWMFLEMVSSLAVRFQFTSLTTPGDYGDPIQVSIWLKQLVSWIFIIFLTKLVIALVIVALEKPLGDLAMWLFAPLQPYPNVELAIVMILCP 204
BLAST of mRNA_H-elongata_contig182357.4889.1 vs. uniprot
Match: A0A3R7HEI9_9STRA (Myotubularin phosphatase domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HEI9_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.140e-24 Identity = 52/131 (39.69%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 16 IVIFLLYPIE--QGGGVLESDECAMYFVNFSLDIAIGTFVIWCFVRVQELAARRFGISSLKVTGDYGTPPLFSVYRTQLLAYMLILVICKAVTTAIVITMDEVLSSLANALFRPVRNYPELELTIVMIFCP 402
++ +LY E Q + D+CA+YFVNF+LD IG F+ + + L A RF +SL+ GDYG P + QLL++++++ K + +++ D+ LSSLA LF+P++NYPE+EL +VMI CP
Sbjct: 678 LIAIMLYSYEEQQKEDDAKVDQCALYFVNFTLDTTIGVFLNYVLLSAVVLLALRFHWTSLQTPGDYGIPVRIKAWLLQLLSWIIVIFSAKFIIAMLILAFDKPLSSLAMVLFKPLKNYPEVELALVMILCP 808
BLAST of mRNA_H-elongata_contig182357.4889.1 vs. uniprot
Match: K3WV98_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WV98_GLOUD) HSP 1 Score: 104 bits (259), Expect = 1.520e-24 Identity = 49/130 (37.69%), Postives = 79/130 (60.77%), Query Frame = 1
Query: 16 IVIFLLYPIEQGGGVLES-DECAMYFVNFSLDIAIGTFVIWCFVRVQELAARRFGISSLKVTGDYGTPPLFSVYRTQLLAYMLILVICKAVTTAIVITMDEVLSSLANALFRPVRNYPELELTIVMIFCP 402
++ LLY + V++ D+CA YFVNF++D G F+ W F+ + ARRF +S+ V GDYG P V+ QL+++++I+ + K V ++ +++ L LA +F P++ YP LEL +VMI CP
Sbjct: 81 LIAILLYNHQMEAQVMKGVDQCAFYFVNFTMDTTFGVFLNWAFLEGFSMLARRFQWTSVMVPGDYGNPIRVRVWLAQLISWIVIIFLTKLVIAVFIVALEKPLGELAMWVFTPLQPYPHLELALVMIACP 210 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig182357.4889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig182357.4889.1 >prot_H-elongata_contig182357.4889.1 ID=prot_H-elongata_contig182357.4889.1|Name=mRNA_H-elongata_contig182357.4889.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp FCCVFIVIFLLYPIEQGGGVLESDECAMYFVNFSLDIAIGTFVIWCFVRVback to top mRNA from alignment at H-elongata_contig182357:67..909+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig182357.4889.1 ID=mRNA_H-elongata_contig182357.4889.1|Name=mRNA_H-elongata_contig182357.4889.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=843bp|location=Sequence derived from alignment at H-elongata_contig182357:67..909+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig182357:67..909+ >mRNA_H-elongata_contig182357.4889.1 ID=mRNA_H-elongata_contig182357.4889.1|Name=mRNA_H-elongata_contig182357.4889.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig182357:67..909+ (Himanthalia elongata Himel1 dioecious)back to top |