mRNA_H-elongata_contig18207.4880.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18207.4880.1 vs. uniprot
Match: D7FLI4_ECTSI (Alkaline phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI4_ECTSI) HSP 1 Score: 218 bits (554), Expect = 3.330e-66 Identity = 107/140 (76.43%), Postives = 120/140 (85.71%), Query Frame = 1
Query: 1 RSISIFDGKTGELVWDSGDFIEQYTADEDNGFSSLFNSQGSPDSFDERSDDKGAEPEGLAITEIDGRIYVFVGLERIGGWMVWDVTDAENPVFQSYTNSWEDDSAPESGAIIPADFSPTGKTLLVSAYEDSNTLAVFEIS 420
RSISIFDGKTGELVWDSGDFIEQ+TAD NG S +FNS G D+FD RSDDKG EPEGLA+ EIDG IYVFVGLERIGGWM WDVTDA PVFQSY NS+E+D+APES +I AD SP+G TLLV+AYE+SNTLAVFE++
Sbjct: 361 RSISIFDGKTGELVWDSGDFIEQFTADPANGVSDIFNSNGGVDTFDGRSDDKGPEPEGLAMAEIDGSIYVFVGLERIGGWMCWDVTDATAPVFQSYVNSYEEDTAPESATVISADMSPSGNTLLVAAYEESNTLAVFELT 500
BLAST of mRNA_H-elongata_contig18207.4880.1 vs. uniprot
Match: A0A6H5KS10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS10_9PHAE) HSP 1 Score: 215 bits (547), Expect = 3.210e-65 Identity = 107/140 (76.43%), Postives = 119/140 (85.00%), Query Frame = 1
Query: 1 RSISIFDGKTGELVWDSGDFIEQYTADEDNGFSSLFNSQGSPDSFDERSDDKGAEPEGLAITEIDGRIYVFVGLERIGGWMVWDVTDAENPVFQSYTNSWEDDSAPESGAIIPADFSPTGKTLLVSAYEDSNTLAVFEIS 420
RSISIFDGKTGELVWDSGDFIEQ+TAD NGFS +FNS G +FD RSDDKG EPEGLA+ EIDG IYVFV LERIGGWM WDVTDA PVFQSY NS+E D+APES A+I AD SP+G TLLV+AYE+SNTLAVFE++
Sbjct: 355 RSISIFDGKTGELVWDSGDFIEQFTADPVNGFSDIFNSNGGVATFDGRSDDKGPEPEGLAMAEIDGSIYVFVSLERIGGWMCWDVTDATAPVFQSYVNSYEGDTAPESAAVISADMSPSGNTLLVAAYEESNTLAVFELT 494
BLAST of mRNA_H-elongata_contig18207.4880.1 vs. uniprot
Match: A0A7Y5F0B7_9CHLR (Bifunctional metallophosphatase/5'-nucleotidase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A7Y5F0B7_9CHLR) HSP 1 Score: 130 bits (326), Expect = 3.130e-32 Identity = 77/139 (55.40%), Postives = 92/139 (66.19%), Query Frame = 1
Query: 1 RSISIFDGKTGELVWDSGDFIEQYTADEDNGFSSLFNSQGSPDSFDERSDDKGAEPEGLAITEIDGRIYVFVGLERIGGWMVWDVTDAENPVFQSYTNSWEDDSAPESGAIIPADFSPTGKTLLVSAYEDSNTLAVFEI 417
RS +I+ G G LV+DSGD EQ TA +LFNSQG SFD RSDDKG EPEG+A+ EI GR Y F+GLERIGG MV+DVTD PVF Y + ++PE IPA SPTG+ LLV YE + ++AVFEI
Sbjct: 411 RSFTIW-GADGSLVFDSGDAFEQITAALT---PALFNSQGDAGSFDTRSDDKGPEPEGVALGEIYGRTYAFIGLERIGGIMVFDVTDPTAPVFVHYAATLATHTSPEGLKFIPASESPTGRPLLVGTYEVTGSVAVFEI 545
BLAST of mRNA_H-elongata_contig18207.4880.1 vs. uniprot
Match: A0A532DD09_9BACT (Alkaline phosphatase n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532DD09_9BACT) HSP 1 Score: 128 bits (322), Expect = 4.000e-32 Identity = 69/129 (53.49%), Postives = 90/129 (69.77%), Query Frame = 1
Query: 31 GELVWDSGDFIEQYTADEDNGFSSLFNSQGSPDSFDERSDDKGAEPEGLAITEIDGRIYVFVGLERIGGWMVWDVTDAENPVFQSYTNSWEDDSAPESGAIIPADFSPTGKTLLVSAYEDSNTLAVFEI 417
G LV+DSGD IEQ+TA +LFNSQG+ D+FD RSD+KG EPEGLAI ++ GR Y F+GLER GG +V+D+TD P+F +Y N+ D +PE I + SP GK LLV ++E SNT+ +FEI
Sbjct: 406 GTLVYDSGDDIEQHTATL---VPTLFNSQGTADTFDTRSDNKGPEPEGLAIGKVSGRTYAFIGLERTGGVIVYDITDPTEPIFATYINTAPTDLSPEGLFFIKEEDSPNGKPLLVVSHEVSNTVTIFEI 531
BLAST of mRNA_H-elongata_contig18207.4880.1 vs. uniprot
Match: A0A7C7DXR2_9CHLR (Calcium-binding protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C7DXR2_9CHLR) HSP 1 Score: 129 bits (324), Expect = 5.570e-32 Identity = 78/147 (53.06%), Postives = 90/147 (61.22%), Query Frame = 1
Query: 1 RSISIFDGKTGELVWDSGDFIEQYTADEDNGFSSLFNSQGSPDSFDERSDDKGAEPEGLAITEIDGRIYVFVGLERIGGWMVWDVTDAENPVFQSYTNSWE--------DDSAPESGAIIPADFSPTGKTLLVSAYEDSNTLAVFEI 417
RS SI+D G LV+DSGD IE+ TA FNS G DSFD RSDDKG EPE LA+ EIDGR Y F+GLERIGG MVWD+TD P+F Y N+ + D APE +PA SPTG LL+ A E S T V+EI
Sbjct: 785 RSFSIWDA-AGNLVFDSGDAIERITAGL---LPDAFNSSGENDSFDSRSDDKGPEPEALALGEIDGRTYAFIGLERIGGVMVWDITDPRAPIFVQYANNRDFTVATEAAGDLAPEGIVFVPAADSPTGAPLLLVANEFSGTTTVWEI 927
BLAST of mRNA_H-elongata_contig18207.4880.1 vs. uniprot
Match: A0A433VFD3_9CYAN (LTD domain-containing protein n=3 Tax=Nostocales TaxID=1161 RepID=A0A433VFD3_9CYAN) HSP 1 Score: 127 bits (319), Expect = 2.780e-31 Identity = 71/140 (50.71%), Postives = 99/140 (70.71%), Query Frame = 1
Query: 1 RSISIFDGKTGELVWDSGDFIEQYTADEDNGFSSLFNSQGSPDSFDERSDDKGAEPEGLAITEIDGRIYVFVGLERIGGWMVWDVTDAENPVFQSYTNSWEDDSAPESGAIIPADFSPTGKTLLVSAYEDSNTLAVFEIS 420
RS +I+D + G+LV++SGD E+ TA + SLFN++G+ +FD RSD+KG EPEG+A+ IDGR Y FVGLER GG MV++VT+ + P+F Y + D +PE + IPA SP GK LLV ++E SNT+AVFE++
Sbjct: 833 RSFTIWDDQ-GKLVYNSGDQFERITAAQ---IPSLFNAEGTAVTFDSRSDNKGPEPEGVAVGVIDGRTYAFVGLERTGGVMVYEVTNPQKPLFVEYLPNQTGDLSPEGVSFIPAAESPNGKNLLVLSHEVSNTVAVFEVN 968
BLAST of mRNA_H-elongata_contig18207.4880.1 vs. uniprot
Match: A0A3E0H3X1_9GAMM (Uncharacterized protein n=1 Tax=Paraperlucidibaca baekdonensis TaxID=748120 RepID=A0A3E0H3X1_9GAMM) HSP 1 Score: 125 bits (315), Expect = 5.990e-31 Identity = 73/158 (46.20%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 1 RSISIFDGKTGELVWDSGDFIEQYTADE--------DNGFSSLFNSQGSPDSFDERSDDKGAEPEGLAITEIDGRIYVFVGLERIGGWMVWDVTDAENPVFQSYTNSWE----------DDSAPESGAIIPADFSPTGKTLLVSAYEDSNTLAVFEIS 420
RS+S+F TGELVWDSGDF+EQYT + D S FNS + D RSDDKG EPEG+ + +I + + F+GLER+GG M +DVTD + PVFQ Y NS + D E A IP+ SPTGK LLV+ +E S T +V+E++
Sbjct: 445 RSMSVFLANTGELVWDSGDFLEQYTGGDLCRAGVLRDTLCQSFFNSGHDDVALDNRSDDKGPEPEGIVLGQIGAKTFAFLGLERVGGVMAFDVTDPKLPVFQDYLNSRDFSVTKTSKDSGDLGAEGLAFIPSAQSPTGKPLLVTGHEVSGTTSVYEVT 602
BLAST of mRNA_H-elongata_contig18207.4880.1 vs. uniprot
Match: A0A2D7QLB1_9BACT (FlgD_ig domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2D7QLB1_9BACT) HSP 1 Score: 125 bits (314), Expect = 1.210e-30 Identity = 73/139 (52.52%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 1 RSISIFDGKTGELVWDSGDFIEQYTADEDNGFSSLFNSQGSPDSFDERSDDKGAEPEGLAITEIDGRIYVFVGLERIGGWMVWDVTDAENPVFQSYTNSWEDDSAPESGAIIPADFSPTGKTLLVSAYEDSNTLAVFEI 417
RS SI+ K GEL++DSGD IEQ TA FNSQG+ +SFD RSDDKG EPEG+ + I+G+ Y F+GLER+GG +V++VTD NP F Y N+ D APE IPA+ SP G LLV E S T VF I
Sbjct: 367 RSFSIWSAK-GELIYDSGDDIEQLTA---LNIPESFNSQGTSESFDSRSDDKGPEPEGVEVGIINGKTYAFIGLERVGGIVVYEVTDPYNPSFVQYINNSPIDIAPEGLVFIPAEESPNGSPLLVVGNEYSGTTTVFHI 501
BLAST of mRNA_H-elongata_contig18207.4880.1 vs. uniprot
Match: A0A545TB92_9PROT (Uncharacterized protein n=2 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TB92_9PROT) HSP 1 Score: 122 bits (307), Expect = 1.140e-29 Identity = 71/144 (49.31%), Postives = 94/144 (65.28%), Query Frame = 1
Query: 1 RSISIFDGKTGELVWDSGDFIEQYTADEDNGFSSLFNSQGSPDSFDERSDDKGAEPEGLAITEIDGRIYVFVGLERIGGWMVWDVTDAENPVFQSYTNSWEDDS-----APESGAIIPADFSPTGKTLLVSAYEDSNTLAVFEI 417
RS SI+D + G LV+DSGD E+ A++ LFNSQG DSFD RSD+KG EPEG+AI EI+G + F+GLER GG MV+ V+D +NP F Y N+ +D +PE I A+ SP GK +L A+E+S T A++EI
Sbjct: 858 RSFSIWDDR-GNLVFDSGDDFERIIAEQR---PDLFNSQGEADSFDSRSDNKGPEPEGIAIGEIEGETFAFIGLERAGGVMVYKVSDPKNPEFVQYINTANEDGTATDISPEGLVFISAEDSPNGKPMLAVAHEESGTTALYEI 997
BLAST of mRNA_H-elongata_contig18207.4880.1 vs. uniprot
Match: UPI000304AE0F (choice-of-anchor I family protein n=1 Tax=Calothrix sp. PCC 7103 TaxID=32057 RepID=UPI000304AE0F) HSP 1 Score: 122 bits (307), Expect = 1.160e-29 Identity = 69/140 (49.29%), Postives = 95/140 (67.86%), Query Frame = 1
Query: 1 RSISIFDGKTGELVWDSGDFIEQYTADEDNGFSSLFNSQGSPDSFDERSDDKGAEPEGLAITEIDGRIYVFVGLERIGGWMVWDVTDAENPVFQSYTNSWEDDSAPESGAIIPADFSPTGKTLLVSAYEDSNTLAVFEIS 420
RS +I+D + G+LV++SGD E+ TA + ++FNS+G +FD RSD+KG EPEG+ + IDGR Y FVGLER GG MV++VT+ + P F Y + D +PE + IPA SP K LLV A+E SNT+AVFE++
Sbjct: 1179 RSFTIWDDQ-GKLVYNSGDQFERITASQT---PTIFNSEGITTNFDSRSDNKGPEPEGVTVGVIDGRTYAFVGLERTGGVMVYEVTNPQKPQFVQYLPNQTGDLSPEGVSFIPATESPNNKNLLVLAHEISNTVAVFEVN 1314 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18207.4880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18207.4880.1 >prot_H-elongata_contig18207.4880.1 ID=prot_H-elongata_contig18207.4880.1|Name=mRNA_H-elongata_contig18207.4880.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp RSISIFDGKTGELVWDSGDFIEQYTADEDNGFSSLFNSQGSPDSFDERSDback to top mRNA from alignment at H-elongata_contig18207:1049..2686+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18207.4880.1 ID=mRNA_H-elongata_contig18207.4880.1|Name=mRNA_H-elongata_contig18207.4880.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1638bp|location=Sequence derived from alignment at H-elongata_contig18207:1049..2686+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18207:1049..2686+ >mRNA_H-elongata_contig18207.4880.1 ID=mRNA_H-elongata_contig18207.4880.1|Name=mRNA_H-elongata_contig18207.4880.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=852bp|location=Sequence derived from alignment at H-elongata_contig18207:1049..2686+ (Himanthalia elongata Himel1 dioecious)back to top |