prot_H-elongata_contig18200.4879.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18200.4879.1
Unique Nameprot_H-elongata_contig18200.4879.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length337
Homology
BLAST of mRNA_H-elongata_contig18200.4879.1 vs. uniprot
Match: A0A6H5KTH9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTH9_9PHAE)

HSP 1 Score: 445 bits (1145), Expect = 1.220e-153
Identity = 241/342 (70.47%), Postives = 289/342 (84.50%), Query Frame = 0
Query:    1 GTAQRTRHHARSIM---HGEGGARGDTVPKAVAAGLLGVQLLGMPIAVVARQATVAGVALPRFELVTAGARVAAPRSPRTIEEEMID-EVEKFERQFEVEGNLKKQSNVKPSPLPDVLKPPKKGQESPRVKLVEIPNERLEKSVQTIQGLSPYLDEVEYLITARKWEYLKGFLGVFGSCEEDFVNLIDGMYPTEKPVDISSRDSMQLEAQNVFLAVDDLYQASISKKVKGAEKAFVKLALAYDRFIKAGNILSVYDPVSSTEKFFNDIPDEMLRYERDSKAPLEVRDAVLILKGPDMGRTGKIVGIIKSRSEAIVRVDGR-TREMRILELSDIARQLPDDPK 337
            G+ QR R ++   M    GEGG RG+ + KAV AGLLG+QLL +P+ VV+RQ    G ALPR ++V+A A V AP++  T EE+ ++ E+EKFER+ +VEGNLKKQS  K  PLP+ L+ PKKG++SPRVKLV + N++L KSV+TIQGL+PYLDEVEYLIT+R W+YLKGFLGVF +CEEDFV LIDGMYPT+KPVD+SSRDSMQLEAQNVFLAVDDLYQAS++KKVKG+EKA+VKLAL+YDRF+KAGNI+  YDPVS+TEKFF DIPDEMLRYERDSK PL VRDAVLILKGPD GRT  +VG+IKSR++A+VR+DG  TREMRILELSDIARQLPDDPK
Sbjct:   42 GSTQRGRRNSGCSMGAGSGEGG-RGEVMNKAVVAGLLGLQLLSLPLGVVSRQPR--GAALPRLDVVSAAAEVTAPQA--TEEEKFVEIELEKFERKTQVEGNLKKQSKAKRVPLPEELQTPKKGKQSPRVKLVPVSNDKLAKSVETIQGLAPYLDEVEYLITSRSWDYLKGFLGVFATCEEDFVALIDGMYPTDKPVDVSSRDSMQLEAQNVFLAVDDLYQASMAKKVKGSEKAYVKLALSYDRFLKAGNIVPAYDPVSNTEKFFTDIPDEMLRYERDSKVPLTVRDAVLILKGPDKGRTAIVVGVIKSRNQAVVRMDGTLTREMRILELSDIARQLPDDPK 378          
BLAST of mRNA_H-elongata_contig18200.4879.1 vs. uniprot
Match: A0A836C8F8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F8_9STRA)

HSP 1 Score: 247 bits (630), Expect = 3.650e-78
Identity = 124/209 (59.33%), Postives = 163/209 (77.99%), Query Frame = 0
Query:  128 LVEIPNERLEKSVQTIQGLSPYLDEVEYLITARKWEYLKGFLGVFGSCEEDFVNLIDGMYPTEKPVDISSRDSMQLEAQNVFLAVDDLYQASISKKVKGAEKAFVKLALAYDRFIKAGNILSVYDPVSSTEKFFNDIPDEMLRYERDSKAPLEVRDAVLILKGPDMGRTGKIVGIIKSRSEAIVRVDGRTREMRILELSDIARQLPDDP 336
            +V + + +LE +V  IQ L+PYL+EVEYLIT++ W YL+GFLGVF   EE+FV+LIDG+YPTE P D SSR++MQ EAQNVFLA+DDL  AS  K+ K AEK+FVKLALAYDRF+KAG ++  YDP++STE F++ IPD  L Y  D+  P E++D +LILKGPD GRTG+++G+IKSR EAIVR+D   +E+++L L DIA+QL   P
Sbjct:    1 MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMD-HNKEVKLLSLGDIAKQLDTPP 206          
BLAST of mRNA_H-elongata_contig18200.4879.1 vs. uniprot
Match: A0A7S2RHK3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHK3_9STRA)

HSP 1 Score: 151 bits (381), Expect = 8.640e-39
Identity = 78/203 (38.42%), Postives = 134/203 (66.01%), Query Frame = 0
Query:  143 IQGLSPYLDEVEYLITARKWEYLKGFLGVFGSCEEDFVNLIDGMYPTEKPVDISSRDSMQLEAQNVFLAVDDLYQASISKKVKGAEKAFVKLALAYDRFIKAGNILSVYDPVSSTEKFFNDIPDEMLRYERDSKAPLEVRDAVLILKGPDMGRTGKIVGIIKSRSEAIVRVDGRTR--------EMRILELSDIARQLPDDPK 337
            I+ L  YL+E+E  I ARKW+ L  ++GVF   E  F N+ID +  ++   D  ++ +M+ EA+ +FL +D + +A+  + ++ AEK++V+LA+AYDRF+KA ++  VYD  + T K +  IP+++L Y+R+   P  V+D VLI+ GPD GRTGK++G+  + S+ +VRV+ R R        E+++++L ++A+ +PD P+
Sbjct:  170 IKVLYAYLEEMERDIFARKWDTLSSYIGVFEKQELAFENIIDSLRTSQAAADRDAKRAMEYEARQMFLTLDAMAEATRFRDIRQAEKSYVQLAIAYDRFLKAADLYDVYDD-TDTSKLYESIPEDLLVYDRED--PPRVQDDVLIIAGPDKGRTGKLIGVSDASSKGVVRVEYRKRTASKDASFEVKVVDLQNVAKTIPDKPQ 369          
BLAST of mRNA_H-elongata_contig18200.4879.1 vs. uniprot
Match: A0A7S2UZ25_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ25_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.910e-33
Identity = 82/197 (41.62%), Postives = 123/197 (62.44%), Query Frame = 0
Query:  143 IQGLSPYLDEVEYLITARKWEYLKGFLGVFGSCEEDFVNLIDGMYPTEKPVDISSRDSMQLEAQNVFLAVDDLYQASISKKVKGAEKAFVKLALAYDRFIKAGNILSVYDPVS-STEKFFNDIPDEML---RYERDSKAPLE---VRDAVLILKGPDMGRTGKIVGIIKSRSEAIVRVDGRTREMRILELSDIARQL 332
            IQ L PY+DEVE  I   +W  + GFLGVF   E+ FVNLIDG++P+  P+D  SR+SMQ EAQ +FLA+D+L +A+  K+V+ +  A+ KLA +Y RF++A  ++   D    +T    ND   EM    +YE   ++ LE    RD VL++ GPD GR GK+V I +   +A+V++D  T+E+  + L  + +Q+
Sbjct:  188 IQALQPYVDEVENYIYEERWPLMGGFLGVFSEQEDQFVNLIDGLFPSNSPLDTISRESMQYEAQRMFLALDELREAAKLKQVRISRDAYSKLAKSYFRFLEAAALVPKVDLAQLATSTNLNDSEMEMEAEEKYEERKQSTLERPEPRDEVLLVSGPDKGRLGKLVAI-EINGKAVVKLD-ITKEVIEVPLESVVKQV 382          
BLAST of mRNA_H-elongata_contig18200.4879.1 vs. uniprot
Match: A0A7R9U506_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U506_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.970e-32
Identity = 68/161 (42.24%), Postives = 105/161 (65.22%), Query Frame = 0
Query:  143 IQGLSPYLDEVEYLITARKWEYLKGFLGVFGSCEEDFVNLIDGMYPTEKPVDISSRDSMQLEAQNVFLAVDDLYQASISKKVKGAEKAFVKLALAYDRFIKAGNILSVYDPVSSTEKFFNDIPDEMLRYERDSKAPLEVRDAVLILKGPDMGRTGKIVGII 303
            I  L PY+DE+E  I    +E L+ FL VF   E+ FV  IDG+        I++ ++M+ EA+ +FLA+D++ +A+  +K  G +K ++KLALAYDR++KA + L  YD + STEK+F +IPDE L ++ + K   E +D V+ ++GPD GRTG ++G I
Sbjct:  121 IAALKPYMDEIERYIFTNDYEPLRAFLNVFSQQEDSFVKTIDGVASRGTADAIAAAEAMEHEAKQLFLALDEIRKAATLEKPSGLKKGYIKLALAYDRYLKASDNLPGYDKIVSTEKYFANIPDEWLVFDTEKKP--EPQDPVIFIEGPDKGRTGVLLGYI 279          
BLAST of mRNA_H-elongata_contig18200.4879.1 vs. uniprot
Match: A0A6U4CV34_9STRA (Hypothetical protein n=10 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CV34_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.610e-28
Identity = 74/181 (40.88%), Postives = 113/181 (62.43%), Query Frame = 0
Query:  133 NERLEKSVQTIQGLSPYLDEVEYLITARKWEYLKGFLGVFGSCEEDFVNLIDGMYPTEK-PVDISSRDSMQLEAQNVFLAVDDLYQASISKKVKGAEKAFVKLALAYDRFIKAGNILSV-YDPVSSTEKFFNDIPDEMLRYERDSKAPLEVRDAVLILKGPDMGRTGKIVGIIKSRSEAIV 311
            N  + K+ + I  L PYLDE++  I    +  L+ FL VF + EE F+  I+ +    + P    + ++M+ EA+ +FLA+DD+ +A+  +K    +K ++KLALAYDR++KA + L + YD V STEKFF D+PDE L Y+ ++  P+ + D VL + GPD GRTG ++G  KSR  A V
Sbjct:  116 NSEVRKAREKIAALKPYLDEIQRYIYTEDYAPLRAFLNVFSAQEEAFLTTIESVGSASRGPAASVTAEAMEHEAKEIFLALDDIRKAATLQKPVALKKGYIKLALAYDRYLKASDNLPLGYDNVVSTEKFFADVPDEWLVYDTET-LPVSL-DPVLFIAGPDKGRTGILLGY-KSRPIADV 293          
BLAST of mRNA_H-elongata_contig18200.4879.1 vs. uniprot
Match: A0A7S3Y3I2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3I2_HETAK)

HSP 1 Score: 115 bits (289), Expect = 2.540e-26
Identity = 63/203 (31.03%), Postives = 116/203 (57.14%), Query Frame = 0
Query:  143 IQGLSPYLDEVEYLITARKWEYLKGFLGVFGSCEEDFVNLIDGMYPTEKPVDISSRDSMQLEAQNVFLAVDDLYQASISKKVKGAEKAFVKLALAYDRFIKAGNILSVYDPVSSTEKFFNDIPDEMLRYERDSKAPLEVRDAVLILKGPDMGRTGKIVGIIKS-------RSEAIVRVDG------RTREMRILELSDIARQL 332
            ++ ++  LDE++  I    WE++  +   F +    F    D  +  E   D  SR +++ E   +F AV+ L +A+  K  + A+ AF ++++AYDR++KAG +   YDPV+STEKFF D+PD  LR+   +  P +++D VL+  GPD G+TG ++G+ ++       +   IV++D       + RE++++  + +A++L
Sbjct:   91 LRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRL 293          
BLAST of mRNA_H-elongata_contig18200.4879.1 vs. uniprot
Match: A0A0G4GSY0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GSY0_VITBC)

HSP 1 Score: 116 bits (291), Expect = 2.690e-26
Identity = 64/203 (31.53%), Postives = 118/203 (58.13%), Query Frame = 0
Query:  137 EKSVQTIQGLSPYLDEVEYLITARKWEYLKGFLGVFGSCEEDFVNLIDGMYPTEKPVDISSRDSMQLEAQNVFLAVDDLYQASISKKVKGAEKAFVKLALAYDRFIKAGNILSVYDPVSSTEKFFNDIPDEMLRYERDSKAPLEVRDAVLILKGPDMGRTGKIVGI-----IKSRSEAIVRVD---GRTREMRILELSDIARQ 331
            +K    I+ ++  LDE++  I    W+ L  +     +    F    D  +P + PVD ++R +++ E   +F +V+ L +A   K V+  E+AF  +++++DR++KAG++  VYDP+ STEKFF  + D  L Y    + P ++RD VL+L+GPD G+TG ++G+      K + + +V++D   G  RE++++  + IA++
Sbjct:  106 QKIAPRIRQIATVLDELQADIYDEDWDILASYPQQLRAYVPIFTKYTDSAFPGKDPVDENTRFALRYEVGRLFGSVERLKRAVDKKDVRETEEAFAAMSVSFDRYLKAGDLYEVYDPIISTEKFFEGVEDSQLVYVPPLRDPPKIRDQVLLLRGPDKGKTGILLGVEGDEVAKVKRKGVVKLDTKVGSIRELKVVPYAFIAKR 308          
BLAST of mRNA_H-elongata_contig18200.4879.1 vs. uniprot
Match: D7FKJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ3_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 1.420e-25
Identity = 62/188 (32.98%), Postives = 114/188 (60.64%), Query Frame = 0
Query:  150 LDEVEYLITARKWEYLKGFLGVFGSCEEDFVNLIDGMYPTEKPVDISSRDSMQLEAQNVFLAVDDLYQASISKKVKGAEKAFVKLALAYDRFIKAGNILSVYDPVSSTEKFFNDIPDEMLRYERDSKAPLEVRDAVLILKGPDMGRTGKIVGI---IKSRSEAIVRVDGRT----REMRILELSDIAR 330
            LDE++  I+   W+ +  +   F +    F    D  +PT+ PVD +SR +++ E    + AV+ L +A+  +  + A+ AF  +++AYDR++KAGN+   YD V+STE F+ D+ +  L+Y   SK P +++D VL++ GPD G+TG ++G+     S ++AIV+++  +    RE++++ L  +A+
Sbjct:  141 LDELQDDISNSDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYADVSNSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGVEGGSLSATKAIVKLETSSALGMREIKVVPLDYVAK 328          
BLAST of mRNA_H-elongata_contig18200.4879.1 vs. uniprot
Match: A0A7S3Y3T3_HETAK (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3T3_HETAK)

HSP 1 Score: 115 bits (289), Expect = 7.980e-25
Identity = 63/203 (31.03%), Postives = 116/203 (57.14%), Query Frame = 0
Query:  143 IQGLSPYLDEVEYLITARKWEYLKGFLGVFGSCEEDFVNLIDGMYPTEKPVDISSRDSMQLEAQNVFLAVDDLYQASISKKVKGAEKAFVKLALAYDRFIKAGNILSVYDPVSSTEKFFNDIPDEMLRYERDSKAPLEVRDAVLILKGPDMGRTGKIVGIIKS-------RSEAIVRVDG------RTREMRILELSDIARQL 332
            ++ ++  LDE++  I    WE++  +   F +    F    D  +  E   D  SR +++ E   +F AV+ L +A+  K  + A+ AF ++++AYDR++KAG +   YDPV+STEKFF D+PD  LR+   +  P +++D VL+  GPD G+TG ++G+ ++       +   IV++D       + RE++++  + +A++L
Sbjct:  600 LRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRL 802          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18200.4879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTH9_9PHAE1.220e-15370.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C8F8_9STRA3.650e-7859.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RHK3_9STRA8.640e-3938.42Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2UZ25_9STRA3.910e-3341.62Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U506_9STRA2.970e-3242.24Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4CV34_9STRA1.610e-2840.88Hypothetical protein n=10 Tax=Phaeomonas parva Tax... [more]
A0A7S3Y3I2_HETAK2.540e-2631.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4GSY0_VITBC2.690e-2631.53Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
D7FKJ3_ECTSI1.420e-2532.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3Y3T3_HETAK7.980e-2531.03Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 278..305
e-value: 0.0029
score: 26.9
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 265..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18200contigH-elongata_contig18200:3664..7117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18200.4879.1mRNA_H-elongata_contig18200.4879.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18200 3664..7117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18200.4879.1 ID=prot_H-elongata_contig18200.4879.1|Name=mRNA_H-elongata_contig18200.4879.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=337bp
GTAQRTRHHARSIMHGEGGARGDTVPKAVAAGLLGVQLLGMPIAVVARQA
TVAGVALPRFELVTAGARVAAPRSPRTIEEEMIDEVEKFERQFEVEGNLK
KQSNVKPSPLPDVLKPPKKGQESPRVKLVEIPNERLEKSVQTIQGLSPYL
DEVEYLITARKWEYLKGFLGVFGSCEEDFVNLIDGMYPTEKPVDISSRDS
MQLEAQNVFLAVDDLYQASISKKVKGAEKAFVKLALAYDRFIKAGNILSV
YDPVSSTEKFFNDIPDEMLRYERDSKAPLEVRDAVLILKGPDMGRTGKIV
GIIKSRSEAIVRVDGRTREMRILELSDIARQLPDDPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005824KOW
IPR008991Translation_prot_SH3-like_sf