prot_H-elongata_contig1818.4868.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1818.4868.1
Unique Nameprot_H-elongata_contig1818.4868.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
[Close]
BLAST of mRNA_H-elongata_contig1818.4868.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 4.420e-28
Identity = 53/109 (48.62%), Postives = 73/109 (66.97%), Query Frame = 0 
Query:    7 IEWKSSTQKCVTTATCEAEYLPLFDASKEAFFMRAVLVFLQPKINGMKVDIFGDNEGPKPIANNPISASLSKHIDVKLYFIRGLIRAGEVHVLHVVEEKQHAGVLTKPL 115
            + W S TQKCV+ +T EAEYL + D  KEA F+  +L FL+P +   K+D+  DNEG   +A NP+S+S SKHIDV+ +F+R L   G + V HV  ++QHA +LTK L
Sbjct:  133 VVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 241
[Close]
BLAST of mRNA_H-elongata_contig1818.4868.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 5.740e-28
Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 0 
Query:    7 IEWKSSTQKCVTTATCEAEYLPLFDASKEAFFMRAVLVFLQPKINGMKVDIFGDNEGPKPIANNPISASLSKHIDVKLYFIRGLIRAGEVHVLHVVEEKQHAGVLTKPL 115
            + W S TQKCV+ +T EAEY+ + D  KEAFF+  +L FL+P     K+D+F DNEG   +A NP+S+S SKHIDV+ +F+R L   G + V HV  ++QHA +LTK L
Sbjct:  260 VSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 368
[Close]
BLAST of mRNA_H-elongata_contig1818.4868.1 vs. uniprot
Match: A0A6H5JTP8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTP8_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 6.910e-27
Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 0 
Query:    7 IEWKSSTQKCVTTATCEAEYLPLFDASKEAFFMRAVLVFLQPKINGMKVDIFGDNEGPKPIANNPISASLSKHIDVKLYFIRGLIRAGEVHVLHVVEEKQHAGVLTKPL 115
            + W + TQKCV+ +T EAEY+ + D  KEA F+  +L FL+P     K+D+F DNEG   +A NP+S+S SKHIDV+ +F+R L   G + V HV  + QHA +LTK L
Sbjct:  165 VSWFAWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKVQHADILTKAL 273
[Close]
BLAST of mRNA_H-elongata_contig1818.4868.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.690e-26
Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 0 
Query:    7 IEWKSSTQKCVTTATCEAEYLPLFDASKEAFFMRAVLVFLQPKINGMKVDIFGDNEGPKPIANNPISASLSKHIDVKLYFIRGLIRAGEVHVLHVVEEKQHAGVLTKPL 115
            + W S TQKCV+ +T EAEYL + D  KEA F+  +L FL+P     K+D+  DNEG   +A NP+S+S SKHIDV+ +F+R L   G + V HV  E+QHA +LTK L
Sbjct:  370 VVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKAL 478
[Close]
BLAST of mRNA_H-elongata_contig1818.4868.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.700e-26
Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 0 
Query:    7 IEWKSSTQKCVTTATCEAEYLPLFDASKEAFFMRAVLVFLQPKINGMKVDIFGDNEGPKPIANNPISASLSKHIDVKLYFIRGLIRAGEVHVLHVVEEKQHAGVLTKPL 115
            + W S TQKCV+ +T EAEYL + D  KEA F+  +L FL+P     K+D+  DNEG   +A NP+S+S SKHIDV+ +F+R L   G + V HV  E+QHA +LTK L
Sbjct:  835 VVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKAL 943
[Close]
BLAST of mRNA_H-elongata_contig1818.4868.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.730e-26
Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 0 
Query:    7 IEWKSSTQKCVTTATCEAEYLPLFDASKEAFFMRAVLVFLQPKINGMKVDIFGDNEGPKPIANNPISASLSKHIDVKLYFIRGLIRAGEVHVLHVVEEKQHAGVLTKPL 115
            + W S TQKCV+ +T EAEYL + D  KEA F+  +L FL+P     K+D+  DNEG   +A NP+S+S SKHIDV+ +F+R L   G + V HV  E+QHA +LTK L
Sbjct: 1102 VVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKAL 1210
[Close]
BLAST of mRNA_H-elongata_contig1818.4868.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 2.310e-26
Identity = 53/109 (48.62%), Postives = 73/109 (66.97%), Query Frame = 0 
Query:    7 IEWKSSTQKCVTTATCEAEYLPLFDASKEAFFMRAVLVFLQPKINGMKVDIFGDNEGPKPIANNPISASLSKHIDVKLYFIRGLIRAGEVHVLHVVEEKQHAGVLTKPL 115
            + W S TQKCV+ +T EAEY+ + D  KEA F+  +L FL+P     K+D+F DNEG   +A NP+S+S SKHIDV+ +F+R L   G + V HV  ++QHA +LTK L
Sbjct:  427 VSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 535
[Close]
BLAST of mRNA_H-elongata_contig1818.4868.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 2.370e-26
Identity = 53/109 (48.62%), Postives = 73/109 (66.97%), Query Frame = 0 
Query:    7 IEWKSSTQKCVTTATCEAEYLPLFDASKEAFFMRAVLVFLQPKINGMKVDIFGDNEGPKPIANNPISASLSKHIDVKLYFIRGLIRAGEVHVLHVVEEKQHAGVLTKPL 115
            + W S TQKCV+ +T EAEY+ + D  KEA F+  +L FL+P     K+D+F DNEG   +A NP+S+S SKHIDV+ +F+R L   G + V HV  ++QHA +LTK L
Sbjct: 1155 VSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 1263
[Close]
BLAST of mRNA_H-elongata_contig1818.4868.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 2.370e-26
Identity = 53/109 (48.62%), Postives = 73/109 (66.97%), Query Frame = 0 
Query:    7 IEWKSSTQKCVTTATCEAEYLPLFDASKEAFFMRAVLVFLQPKINGMKVDIFGDNEGPKPIANNPISASLSKHIDVKLYFIRGLIRAGEVHVLHVVEEKQHAGVLTKPL 115
            + W S TQKCV+ +T EAEYL + D  KEA F+  +L FL+P +   K+D+  DNEG   +A NP+S+S SKHIDV+ +F+R L   G + V HV  ++QHA +LTK L
Sbjct: 1276 VVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 1384
[Close]
BLAST of mRNA_H-elongata_contig1818.4868.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 5.970e-26
Identity = 52/109 (47.71%), Postives = 73/109 (66.97%), Query Frame = 0 
Query:    7 IEWKSSTQKCVTTATCEAEYLPLFDASKEAFFMRAVLVFLQPKINGMKVDIFGDNEGPKPIANNPISASLSKHIDVKLYFIRGLIRAGEVHVLHVVEEKQHAGVLTKPL 115
            + W S TQKCV+ +T E+EYL + D  KEA F+  +L FL+P +   K+D+  DNEG   +A NP+S+S SKHIDV+ +F+R L   G + V HV  ++QHA +LTK L
Sbjct: 1066 VVWISRTQKCVSQSTSESEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 1174
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1818.4868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCG6_9PHAE4.420e-2848.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRE7_9PHAE5.740e-2849.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTP8_9PHAE6.910e-2747.71Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9B2_9PHAE1.690e-2649.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KKK1_9PHAE1.700e-2649.54Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE1.730e-2649.54Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JP36_9PHAE2.310e-2648.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH25_9PHAE2.370e-2648.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE2.370e-2648.62Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3I1_9PHAE5.970e-2647.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1818contigH-elongata_contig1818:2314..2658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1818.4868.1mRNA_H-elongata_contig1818.4868.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1818 2314..2682 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1818.4868.1 ID=prot_H-elongata_contig1818.4868.1|Name=mRNA_H-elongata_contig1818.4868.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
MLRDTAIEWKSSTQKCVTTATCEAEYLPLFDASKEAFFMRAVLVFLQPKI
NGMKVDIFGDNEGPKPIANNPISASLSKHIDVKLYFIRGLIRAGEVHVLH
VVEEKQHAGVLTKPL
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