mRNA_H-elongata_contig181543.4861.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A8F0JZQ3_9PHAE (ABC transporter domain-containing protein n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A8F0JZQ3_9PHAE) HSP 1 Score: 448 bits (1152), Expect = 1.460e-158 Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 1
Query: 1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKK+KSIILITHYKRLLEYIKPDFIHVMQD
Sbjct: 1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKNKSIILITHYKRLLEYIKPDFIHVMQD 230
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A8F0JYB8_MACPY (ABC transporter domain-containing protein n=30 Tax=Laminariales TaxID=2886 RepID=A0A8F0JYB8_MACPY) HSP 1 Score: 412 bits (1058), Expect = 3.080e-144 Identity = 206/230 (89.57%), Postives = 222/230 (96.52%), Query Frame = 1
Query: 1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
M+KN +VPLLE+KNLHA+I+ KILKGV+L IFEGEIHAIMGTNGSGKSTLSK+IAGHPSY +TEGEILF+G+NICDLDPDLRSHLG+FLAFQYPVEIAGVDNQEFLQAIYNAKQVSM+LP+VNPLFFYELLREKL MVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETIN LM+ KSKS+ILITHYKRLLEYI+PDFIHVMQD
Sbjct: 1 MSKNNKVPLLEIKNLHANIDGTKILKGVDLCIFEGEIHAIMGTNGSGKSTLSKVIAGHPSYEVTEGEILFQGQNICDLDPDLRSHLGLFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMDLPKVNPLFFYELLREKLKMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINTLMKNKSKSVILITHYKRLLEYIRPDFIHVMQD 230
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A6G6D7A2_ECTSI (ABC transporter domain-containing protein n=9 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7A2_ECTSI) HSP 1 Score: 409 bits (1052), Expect = 2.440e-143 Identity = 204/227 (89.87%), Postives = 218/227 (96.04%), Query Frame = 1
Query: 10 NIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
N +PLLE++NLHA+INNNKIL+GVNLSIFEGEIHAIMGTNGSGKSTLSK+IAGHPSY + EGEILF+GKNICDLDPDLRSHLG+FLAFQYPVEIAGVDNQEFL+AIYNAKQVSMNLP+ NPLFFYELLREKL MV LDESFISRNVNEGFSGGEKKRNEILQFALLDS LGILDETDSGLDIDALKSIS+TIN+LME K+KSIILITHYKRLLEYIKPDFIHVMQD
Sbjct: 3 NKTIPLLEIRNLHANINNNKILRGVNLSIFEGEIHAIMGTNGSGKSTLSKVIAGHPSYDVIEGEILFQGKNICDLDPDLRSHLGLFLAFQYPVEIAGVDNQEFLEAIYNAKQVSMNLPKANPLFFYELLREKLKMVNLDESFISRNVNEGFSGGEKKRNEILQFALLDSILGILDETDSGLDIDALKSISKTINILMENKNKSIILITHYKRLLEYIKPDFIHVMQD 229
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A2R4QQ20_9PHAE (Iron-sulfur cluster formation ABC transporter ATP-binding subunit n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ20_9PHAE) HSP 1 Score: 395 bits (1015), Expect = 1.090e-137 Identity = 196/230 (85.22%), Postives = 221/230 (96.09%), Query Frame = 1
Query: 1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
M KNI+VPLLE++NLHA+IN+NKILKGVNLSI+EGE+HAIMG NGSGKSTLSK+IAGHPSY I +GEILF+GK+I +LDPDLRSHLG+FLAFQYPVEIAG+DNQEFL+AIYNAK++SMNLP+VNPLFFYELLR+KL MVKLDESFISRNVNEGFSGGEKKRNEILQFALLDS+LGILDETDSGLDIDALKSISETIN +++ ++KSIILITHYKRLLEYIKPDFIHVM D
Sbjct: 1 MIKNIKVPLLEIRNLHANINDNKILKGVNLSIYEGEVHAIMGINGSGKSTLSKVIAGHPSYNIIKGEILFQGKDISNLDPDLRSHLGLFLAFQYPVEIAGLDNQEFLEAIYNAKRLSMNLPKVNPLFFYELLRKKLKMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSQLGILDETDSGLDIDALKSISETINTIIKTENKSIILITHYKRLLEYIKPDFIHVMDD 230
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A120HYF8_9PHAE (SufC n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A120HYF8_9PHAE) HSP 1 Score: 386 bits (992), Expect = 3.130e-134 Identity = 191/230 (83.04%), Postives = 218/230 (94.78%), Query Frame = 1
Query: 1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
M K ++PLLE+KNLHA+I+++KILKG+NLSIFEGE+HAIMG NGSGKSTLSK+IAGHPSY+IT+GEILFEGK+I +L+PDLRSHLG+FLAFQYP+EIAGVDNQEFL AIYNAKQ+S +LP+VNPL FYEL++EKL MVKLDE FISRNVNEGFSGGEKKRNEILQFALLDSK+GILDETDSGLDIDALKSISETIN L++KK+KSIILITHYKRLLEYIKPDFIH+M D
Sbjct: 1 MIKKTKLPLLEIKNLHANIDDSKILKGINLSIFEGEVHAIMGVNGSGKSTLSKVIAGHPSYSITKGEILFEGKDISNLEPDLRSHLGLFLAFQYPIEIAGVDNQEFLAAIYNAKQLSRDLPKVNPLTFYELVKEKLKMVKLDERFISRNVNEGFSGGEKKRNEILQFALLDSKVGILDETDSGLDIDALKSISETINTLIKKKNKSIILITHYKRLLEYIKPDFIHIMDD 230
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A8E6D6C7_9PHAE (Iron-sulfur cluster formation ABC transporter n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6C7_9PHAE) HSP 1 Score: 365 bits (937), Expect = 8.260e-126 Identity = 181/230 (78.70%), Postives = 204/230 (88.70%), Query Frame = 1
Query: 1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
MN N ++PLLE+KNLHA IN NKIL GVNLSIF G+IHAIMGTNGSGKSTLSKII GHPSYT+TEGEILF G+NIC+L+PD RSH+G+FLAFQYPVEIAGV N++FL+ YNAKQ NLP ++PL F+ +++EKL M+K+D SF+ RN+NEGFSGGEKKRNEILQFALLDS LGILDETDSGLDIDALKSISETIN LM K KSIILITHYKRLLEYIKPDFIHVMQD
Sbjct: 1 MNNNRKIPLLEIKNLHATINGNKILNGVNLSIFPGQIHAIMGTNGSGKSTLSKIIVGHPSYTLTEGEILFMGQNICELEPDARSHIGLFLAFQYPVEIAGVGNEDFLRLAYNAKQTYFNLPVIDPLDFHMIMQEKLEMIKMDPSFLQRNLNEGFSGGEKKRNEILQFALLDSILGILDETDSGLDIDALKSISETINQLMLNKEKSIILITHYKRLLEYIKPDFIHVMQD 230
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A8F0F7B5_9PHAE (ABC transporter domain-containing protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7B5_9PHAE) HSP 1 Score: 357 bits (917), Expect = 1.020e-122 Identity = 177/225 (78.67%), Postives = 204/225 (90.67%), Query Frame = 1
Query: 16 RVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
++P+LE+KNLHA+I + +ILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYT+TEGEILFEGKNIC+LDPD+RSHLG+FLAFQYPVE+ GV N+ FL+A AK+ LP +N L F LL EK+ MVKL++SF+SRNVNEGFSGGEKKRNEILQFA+LDSK+GILDETDSGLDIDALKSIS++IN LM KK+KSIILITHYKRLLEY+KPDF+HVMQD
Sbjct: 4 KMPILEIKNLHANIEDTQILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTLTEGEILFEGKNICELDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTLEFTNLLLEKMRMVKLEKSFLSRNVNEGFSGGEKKRNEILQFAVLDSKIGILDETDSGLDIDALKSISDSINQLMLKKNKSIILITHYKRLLEYVKPDFVHVMQD 228
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A2I4Q2M5_9PHAE (ABC transporter domain-containing protein n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2M5_9PHAE) HSP 1 Score: 334 bits (857), Expect = 1.150e-113 Identity = 169/224 (75.45%), Postives = 196/224 (87.50%), Query Frame = 1
Query: 19 VPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
+PLLEVKNLHA ++ +ILKGVNLSIF+GEIHAIMGTNGSGKSTLSKIIAGHPSY + EGEILF+GK+IC LDP+ RSHLG+FLAFQYPVE+ GV+N+ FL+A A++ S +LP +N L F LL EKL +VKLD++F++RNVNEGFSGGEKKRNEI QFA+LDS+L ILDETDSGLDIDALKSIS IN LM KK+KSIILITHYKRLLEYIKPDFIHVM +
Sbjct: 5 IPLLEVKNLHAQVDEVEILKGVNLSIFKGEIHAIMGTNGSGKSTLSKIIAGHPSYQLIEGEILFKGKDICLLDPESRSHLGLFLAFQYPVELTGVNNEAFLKAAVTAQRQSKDLPPLNSLEFTSLLLEKLKLVKLDKNFLARNVNEGFSGGEKKRNEIFQFAVLDSELAILDETDSGLDIDALKSISNAINELMAKKAKSIILITHYKRLLEYIKPDFIHVMHN 228
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A8E5BHM2_9PHAE (FeS cluster assembly suf system ATPase SufC n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BHM2_9PHAE) HSP 1 Score: 324 bits (831), Expect = 8.770e-110 Identity = 166/227 (73.13%), Postives = 194/227 (85.46%), Query Frame = 1
Query: 10 NIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
N +VPLLE+KNLH +IN KILKG++L+IFEGEIHAIMG NGSGKSTLSK+IAGHPSY I +G+ILF+G NI L+P+LRSHLG+FLAFQYP+EI GV+N EFLQ++YN KQ +M L NPL FYELL +K+ V+LD+SF+ RNVNEGFSGGEKKRNEILQF LLDS LGI DETDSGLDID+LKSIS+TIN L +K K IILITHYKRLLE IKPDFIH+M +
Sbjct: 2 NNKVPLLEIKNLHVNINEIKILKGIDLTIFEGEIHAIMGKNGSGKSTLSKVIAGHPSYKIVKGDILFKGINISTLEPNLRSHLGLFLAFQYPIEIPGVNNLEFLQSMYNTKQRAMYLSVTNPLNFYELLLDKIKQVQLDKSFLFRNVNEGFSGGEKKRNEILQFLLLDSILGIFDETDSGLDIDSLKSISQTINSLKLEK-KGIILITHYKRLLEKIKPDFIHIMSN 227
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: B7T1Z2_VAULI (ABC ATPase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1Z2_VAULI) HSP 1 Score: 317 bits (812), Expect = 6.580e-107 Identity = 160/222 (72.07%), Postives = 188/222 (84.68%), Query Frame = 1
Query: 25 LLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
+LEVKNLH I+N +ILKGVN S+ GEIHAIMG NGSGKST SKI+AGHPSY IT GEIL+ G+NICD DPD+R+H GIFLAFQYPVEI GV+N++FL+ YN++Q ++ E+ PL F E+L EKL +V LD F+SRNVNEGFSGGEKKRNEILQFALL+S+LGILDE DSGLDIDALK+ISE +N L++ K KSIILITHYKRLLEYIKPDFIHVM +
Sbjct: 6 MLEVKNLHVTIDNIEILKGVNFSLNSGEIHAIMGPNGSGKSTFSKILAGHPSYKITSGEILYNGENICDFDPDIRAHKGIFLAFQYPVEIPGVNNEDFLRLAYNSRQKALQQNELEPLKFLEVLVEKLKLVNLDPIFLSRNVNEGFSGGEKKRNEILQFALLNSELGILDEMDSGLDIDALKTISEAVN-LLKTKDKSIILITHYKRLLEYIKPDFIHVMMN 226 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig181543.4861.1 >prot_H-elongata_contig181543.4861.1 ID=prot_H-elongata_contig181543.4861.1|Name=mRNA_H-elongata_contig181543.4861.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bp MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTback to top mRNA from alignment at H-elongata_contig181543:1..690- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig181543.4861.1 ID=mRNA_H-elongata_contig181543.4861.1|Name=mRNA_H-elongata_contig181543.4861.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=690bp|location=Sequence derived from alignment at H-elongata_contig181543:1..690- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig181543:1..690- >mRNA_H-elongata_contig181543.4861.1 ID=mRNA_H-elongata_contig181543.4861.1|Name=mRNA_H-elongata_contig181543.4861.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1380bp|location=Sequence derived from alignment at H-elongata_contig181543:1..690- (Himanthalia elongata Himel1 dioecious)back to top |