prot_H-elongata_contig18147.4858.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18147.4858.1
Unique Nameprot_H-elongata_contig18147.4858.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length306
Homology
BLAST of mRNA_H-elongata_contig18147.4858.1 vs. uniprot
Match: D8LS35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS35_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 3.620e-71
Identity = 136/246 (55.28%), Postives = 173/246 (70.33%), Query Frame = 0
Query:   33 QSVIDGQDTKVDALYG---SVRDACSSVRSDVRDTLMCLVS--RSSNGKLRESERGDHSDKTKANMAEVAKFVREQHQRLEDSSRRVEKANIGLTLLVRKLERSVHVMSSRDFFWEAIGNKLNAHAEAFGDASWKAEVASDQQDRFVLTVELRQYVAGNTQRVAKLIAQQVDFEVLQKIVAATTPDRGDHDWDRRVQIMRGDFLERFLVDTRRMVDKKYPIHGSFCARNRNRFFAKVEQGLKVAMS 273
            Q VID   ++V+ +      V +   +VR+D+   +  L     S +G L+ +   DH        A+VA  VREQ QR E+SSRRVE+AN+ LTLLV+KLERS+ V+SSRD FWE +G KL AHAEAF DAS + E  S++QDRFVLTVEL+QY+AGNTQRVAKLI Q+ DFEV+QK+ A+T  ++G  DWDRRVQ MRG FLE F+ + RR +D+KYP HG F ARNR+RFF K+EQGLKV  S
Sbjct:  478 QEVIDLLTSEVETISYRVLEVENLAEAVRTDLSPEIATLEEGVESVHGILKRALE-DHQRILDTQDAKVATAVREQQQRREESSRRVERANLSLTLLVKKLERSLFVLSSRDLFWEEVGTKLKAHAEAFADASCRVEATSEEQDRFVLTVELQQYIAGNTQRVAKLICQKADFEVIQKLTASTNIEKGAQDWDRRVQSMRGSFLEHFVANARRYLDRKYPSHGPFGARNRDRFFVKLEQGLKVNSS 722          
BLAST of mRNA_H-elongata_contig18147.4858.1 vs. uniprot
Match: A0A7S3USE9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USE9_HETAK)

HSP 1 Score: 139 bits (350), Expect = 4.460e-36
Identity = 73/195 (37.44%), Postives = 113/195 (57.95%), Query Frame = 0
Query:  108 EDSSRRVEKANIGLTLLVRKLERSVHVMSSRDFFWEAIGNKLNAHAEAFGDASWKAEVASDQQDRFVLTVELRQYVAGNTQRVAKLIAQQVDFEVLQKIVAATTPDRGDHDWDRRVQIMRGDFLERFLVDTRRMVDKKYPIHGSFCARNRNRFFAKVEQGLKVAMSKHRSVEAGSTLFGKIKLD-PACIACNRPF 301
            E+S  R E++++GL  L R+ E  V  ++S+  FWEA+  +L AH + FGD   + E  S     F L+ E ++Y+AGN QRVAKL+ Q+ DFE ++++  +  P+  D DWD +V  +R  +   F         K++    +     R RF AK++Q +++A+SK   V+ G TLFGK     PAC+AC+RPF
Sbjct:   32 EESCGRTERSSVGLAALCRQAEGQVRAIASKSLFWEALQARLQAHLKGFGDRCCELEANSSAAHAFSLSPEAQRYLAGNAQRVAKLVGQRADFETIRQVSTSRHPE--DEDWDTKVDQLRQKYRAEFTQGVEAYAAKQHRSGDTVVLDTRRRFLAKLDQAVRLALSKFNKVQPGLTLFGKRSAQVPACMACDRPF 224          
BLAST of mRNA_H-elongata_contig18147.4858.1 vs. uniprot
Match: D8LLI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI9_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 2.690e-31
Identity = 74/208 (35.58%), Postives = 123/208 (59.13%), Query Frame = 0
Query:   86 SDKTKANMAEVAKFVREQHQRLEDSSRRVEKANIGLTLLVRKLERSVHVMSSRDFFWEAIGNKLNAHAEAFGDASWKAEVAS-DQQDRFVLTVELRQYVAGNTQRVAKLIAQQVDFEVLQKIVAATTPDRGDHDWDRRVQIMRGDFLERFLVDTRRMVDKKYP-IHGSFCARN-RNRFFAKVEQGLKVAMSKHRSVEAGSTLFGKIKL 290
            SD  + ++A +   +R Q +        ++++++G+  ++RK+E  VH +S++D FW+A+  KL AH  A G+     E A+  ++ R  L+ E +  +AG+ QRVAKL+A + D+EV++++    TP++   DWD RV+ +R   + RFL D R  +DK  P +  +F     R +F  K+   LKVA+SK+     G+TLFGKIKL
Sbjct:  656 SDVARLSLAHLGTALRRQGEDAAQMVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLDTPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKL 863          
BLAST of mRNA_H-elongata_contig18147.4858.1 vs. uniprot
Match: A0A836CLL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL5_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.700e-31
Identity = 74/217 (34.10%), Postives = 118/217 (54.38%), Query Frame = 0
Query:  109 DSSRRVEKANIGLTLLVRKLERSVHVMSSRDFFWEAIGNKLNAHAEAFGDASWKAEVASDQQDRFV-------------------LTVELRQYVAGNTQRVAKLIAQQVDFEVLQKIVAATTPDRGDHDWDRRVQIMRGDFLERFLVDTRRMVDKKYPIHGSFCARNRNRFFAKVEQGLKVAMSKHRSVEAGSTLFGKIKL-DPACIACNRPFGTSS 305
            D+   ++++ +   L +R++E +   ++S+  FWE+   KL AH E     S + E A+                          L  +  + +AGNTQRVAKLIA + D+EV++ +  A  P    HDWD RV+ +RG FL +F  D R ++ K+ P  G      R RF A+V+  L+VA+SK+R    G+TLFG++++   AC+AC+RPF T++
Sbjct:  708 DALEALQRSGVANALALRRVETAFQSLASKGLFWESTDIKLAAHVEEVARVSLQVEAAAXXXXXXXXXXXXXXXXXXSAPPGAPHLAPDALRVLAGNTQRVAKLIAAKADYEVIRLVSRAEDPGAEGHDWDARVETLRGAFLAQFSADARNVLRKRAPHQGPAAEAARGRFLARVDGALRVALSKYRPTTPGATLFGRVRVVAQACVACDRPFATAA 924          
BLAST of mRNA_H-elongata_contig18147.4858.1 vs. uniprot
Match: A0A8J2S9U3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9U3_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 6.030e-15
Identity = 52/202 (25.74%), Postives = 95/202 (47.03%), Query Frame = 0
Query:  103 QHQR-LEDSSRRVEKANIGLTLLVRKLERSVHVMSSRDFFWEAIGNKLNAHAEAFGDASWKAEVASDQQDRFVLTVELRQYVAGNTQRVAKLIAQQVDFEVLQKIVAATTPDRGDHDWDRRVQIMRGDFLERFLVDTRRMVDKKYPIHGSFCARNRNRFFAKVEQGLKVAMSKHRSVEAGSTLFGKIKLDPACIACNRPFGT 303
            +H+R  +D+  R+ ++ +   + V++++        +D   + +   L+ H         +AE A   +    L V  ++++A   Q  ++ +A + D E L+ ++    P      WD++++  R   L  F         K +P +       R RF  +++  L+V +SKH  V    TLFGK KL PAC+AC+RPF T
Sbjct:  523 EHERDYDDAMARLHRSLVAQAVAVKQIKHMAGSAVLKDMAGDRLDAILDEHVSELAKHCVEAESAVISEREMSLPVNEQKWLAATIQHCSEALATRADLECLRGLIGHVEPPETSDLWDQQLEKNRARLLRSFCERLDEAAAKLHPTNDHMAEATRRRFNERLKLCLRVGLSKHDPVRPNMTLFGKTKLGPACVACDRPFDT 724          
BLAST of mRNA_H-elongata_contig18147.4858.1 vs. uniprot
Match: W7TB27_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB27_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 7.340e-10
Identity = 59/209 (28.23%), Postives = 101/209 (48.33%), Query Frame = 0
Query:  109 DSSRRVEKANIGLTLLVRKLERSVHVMSSRDFFWEAIGNKLNAHAEA--------FGDASWKA----EVASDQQDRFVLTVELRQYVAGNTQRVAKLIAQQVDFEVLQKIVAATTPDRGDHDWDRRVQIMRGDFLERFLVDTRRMVDKKYPIHG--SFCARNRNRFFAKVEQGLKVAMSKHRSVEAGSTLFGKIKLDP--ACIACNRPF 301
            D   R+E+   GL+    +L  SV  + +R   W A+  +L  + E+        F  +S  +    +V   Q    +L  E    +A ++ R+AK IA + D+++++  V +      D+  D ++   R  +L RFL   +R V+      G  S       +F +K+EQ +++A+SK   +  G +LFGKI L+   AC+ACNR F
Sbjct:   90 DQLLRLEQDIEGLSGSYEQLHGSVQALVTRSNHWAALDVRLQEYHESLVKHCRHIFARSSLSSYGPDQVLQLQGRGLLLKKETVDLIASHSYRIAKTIALKADYDIIRHNVESKDT-LTDNQCDAKILQSRETYLMRFLGGVKRAVEVGLDGEGRASGITEIITQFHSKLEQAIRLALSKFSRIHTGRSLFGKISLEAEAACLACNRQF 297          
BLAST of mRNA_H-elongata_contig18147.4858.1 vs. uniprot
Match: A0A7S3JPN6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPN6_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.680e-9
Identity = 27/71 (38.03%), Postives = 47/71 (66.20%), Query Frame = 0
Query:  231 LERFLVDTRRMVDKKYPIHGSFCARNRNRFFAKVEQGLKVAMSKHRSVEAGSTLFGKIKLDPACIACNRPF 301
            + +F+V  R+  +K +P   +     R+ F ++++ GLKV +SKH+ ++   TLFGK++L P C+AC+RPF
Sbjct:    4 ISKFIVGVRQAANKLHPTTDTKVQSTRDLFLSRLDLGLKVGISKHQKIQPNYTLFGKLRLKPTCVACDRPF 74          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18147.4858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LS35_ECTSI3.620e-7155.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3USE9_HETAK4.460e-3637.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8LLI9_ECTSI2.690e-3135.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CLL5_9STRA3.700e-3134.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2S9U3_9STRA6.030e-1525.74Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W7TB27_9STRA7.340e-1028.23Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S3JPN6_9STRA2.680e-938.03Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18147contigH-elongata_contig18147:2534..6281 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18147.4858.1mRNA_H-elongata_contig18147.4858.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18147 2534..6281 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18147.4858.1 ID=prot_H-elongata_contig18147.4858.1|Name=mRNA_H-elongata_contig18147.4858.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=306bp
EAVRADVSLEICVLRDTLDAVHSDFRRLLEEHQSVIDGQDTKVDALYGSV
RDACSSVRSDVRDTLMCLVSRSSNGKLRESERGDHSDKTKANMAEVAKFV
REQHQRLEDSSRRVEKANIGLTLLVRKLERSVHVMSSRDFFWEAIGNKLN
AHAEAFGDASWKAEVASDQQDRFVLTVELRQYVAGNTQRVAKLIAQQVDF
EVLQKIVAATTPDRGDHDWDRRVQIMRGDFLERFLVDTRRMVDKKYPIHG
SFCARNRNRFFAKVEQGLKVAMSKHRSVEAGSTLFGKIKLDPACIACNRP
FGTSSQ
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