prot_H-elongata_contig181469.4857.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig181469.4857.1
Unique Nameprot_H-elongata_contig181469.4857.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
BLAST of mRNA_H-elongata_contig181469.4857.1 vs. uniprot
Match: A0A6A2XKG3_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XKG3_HIBSY)

HSP 1 Score: 64.7 bits (156), Expect = 2.100e-9
Identity = 48/139 (34.53%), Postives = 71/139 (51.08%), Query Frame = 0
Query:    1 CFNCGKGGHYARDCRASEESGATDNRKAAKGAILAKLTVPAVPEVGTIAAMVGAACGDRKEEWESDSGSTFHMSHTRAGMSAYKKASPGMTVEIADENTLQVDGFGRIEMDVDQPGHTTKRVKMDDVAYVPGISRNLLS 139
            C+NCGK GH+ RDCRA ++  +T           A +T     E G   AM+  +     E W  DSG++FH +  +  M  Y     G  V +AD+ TL++ G G I + +  P  TT   K+  V ++PG+ RNL+S
Sbjct:  392 CYNCGKNGHFKRDCRALKKDTSTQGS--------ANMT----EETGD--AMI-LSVNSPIESWILDSGASFHSTSCQEIMENYVSGDFGK-VHLADDETLKIVGKGDIRLKL--PNQTTW--KLTGVRHIPGLKRNLIS 510          
BLAST of mRNA_H-elongata_contig181469.4857.1 vs. uniprot
Match: A0A6A3BK95_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BK95_HIBSY)

HSP 1 Score: 64.3 bits (155), Expect = 2.790e-9
Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 0
Query:    1 CFNCGKGGHYARDCRASEESGATDNRKAAKGAILAKLTVPAVPEVGTIAAMVGAACGDRKEEWESDSGSTFHMSHTRAGMSAYKKASPGMTVEIADENTLQVDGFGRIEMDVDQPGHTTKRVKMDDVAYVPGISRNLLS 139
            C+NCGK GH+ RDCRA ++     N  A + A + +       E G   AM+  +     E W  DSG++FH +  R  M  Y     G  V +AD+ TL++ G G I + +  P  TT   K+  V ++PG+ RNL+S
Sbjct:  233 CYNCGKKGHFKRDCRAPKK-----NTGAQESANMTE-------ETGD--AMI-LSVNSPIESWILDSGASFHSTPCREIMENYVSGDFGK-VHLADDETLKIVGKGDIRLKL--PNQTTW--KLTGVRHIPGLKRNLIS 351          
BLAST of mRNA_H-elongata_contig181469.4857.1 vs. uniprot
Match: A0A6A2W9F3_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2W9F3_HIBSY)

HSP 1 Score: 64.3 bits (155), Expect = 2.850e-9
Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 0
Query:    1 CFNCGKGGHYARDCRASEESGATDNRKAAKGAILAKLTVPAVPEVGTIAAMVGAACGDRKEEWESDSGSTFHMSHTRAGMSAYKKASPGMTVEIADENTLQVDGFGRIEMDVDQPGHTTKRVKMDDVAYVPGISRNLLS 139
            C+NCGK GH+ RDCRA ++     N  A + A + +       E G   AM+  +     E W  DSG++FH +  R  M  Y     G  V +AD+ TL++ G G I + +  P  TT   K+  V ++PG+ RNL+S
Sbjct:  233 CYNCGKKGHFKRDCRAPKK-----NTGAQESANITE-------ETGD--AMI-LSVNSPIESWILDSGASFHSTPCREIMENYVSGDFGK-VHLADDETLKIVGKGDIRLKL--PNQTTW--KLTGVRHIPGLKRNLIS 351          
BLAST of mRNA_H-elongata_contig181469.4857.1 vs. uniprot
Match: A0A6A2WXJ4_HIBSY (F-box family protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXJ4_HIBSY)

HSP 1 Score: 64.3 bits (155), Expect = 2.890e-9
Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 0
Query:    1 CFNCGKGGHYARDCRASEESGATDNRKAAKGAILAKLTVPAVPEVGTIAAMVGAACGDRKEEWESDSGSTFHMSHTRAGMSAYKKASPGMTVEIADENTLQVDGFGRIEMDVDQPGHTTKRVKMDDVAYVPGISRNLLS 139
            C+NCGK GH+ RDCRA ++     N  A + A + +       E G   AM+  +     E W  DSG++FH +  R  M  Y     G  V +AD+ TL++ G G I + +  P  TT   K+  V ++PG+ RNL+S
Sbjct:  709 CYNCGKKGHFKRDCRAPKK-----NTGAQESANMTE-------ETGD--AMI-LSVNSPIESWILDSGASFHSTPCREIMENYVSGDFGK-VHLADDETLKIVGKGDIRLKL--PNQTTW--KLTGVRHIPGLKRNLIS 827          
BLAST of mRNA_H-elongata_contig181469.4857.1 vs. uniprot
Match: A0A6A3AJH8_HIBSY (Ion channel CASTOR n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AJH8_HIBSY)

HSP 1 Score: 64.3 bits (155), Expect = 2.900e-9
Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 0
Query:    1 CFNCGKGGHYARDCRASEESGATDNRKAAKGAILAKLTVPAVPEVGTIAAMVGAACGDRKEEWESDSGSTFHMSHTRAGMSAYKKASPGMTVEIADENTLQVDGFGRIEMDVDQPGHTTKRVKMDDVAYVPGISRNLLS 139
            C+NCGK GH+ RDCRA ++     N  A + A + +       E G   AM+  +     E W  DSG++FH +  R  M  Y     G  V +AD+ TL++ G G I + +  P  TT   K+  V ++PG+ RNL+S
Sbjct:  830 CYNCGKKGHFKRDCRAPKK-----NTGAQESANMTE-------ETGD--AMI-LSVNSPIESWILDSGASFHSTPCREIMENYVSGDFGK-VHLADDETLKIVGKGDIRLKL--PNQTTW--KLTGVRHIPGLKRNLIS 948          
BLAST of mRNA_H-elongata_contig181469.4857.1 vs. uniprot
Match: A0A6A3B0Z1_HIBSY (CCHC-type domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B0Z1_HIBSY)

HSP 1 Score: 63.5 bits (153), Expect = 5.230e-9
Identity = 46/139 (33.09%), Postives = 70/139 (50.36%), Query Frame = 0
Query:    1 CFNCGKGGHYARDCRASEESGATDNRKAAKGAILAKLTVPAVPEVGTIAAMVGAACGDRKEEWESDSGSTFHMSHTRAGMSAYKKASPGMTVEIADENTLQVDGFGRIEMDVDQPGHTTKRVKMDDVAYVPGISRNLLS 139
            C+NCGK GH+ RDCRA ++     N  A + A + + T  A+            +     E W  DSG++FH +  +  M  Y     G  V +AD+ TL++ G G I + +  P  TT   K+  V ++PG+ RNL+S
Sbjct:  401 CYNCGKKGHFKRDCRAPKK-----NTGAQESANMTEETSDAMI----------LSVNSPIESWILDSGASFHSTSCQEIMENYVSGDFGK-VHLADDETLKIVGKGDIRLKL--PNQTTW--KLTGVRHIPGLKRNLIS 519          
BLAST of mRNA_H-elongata_contig181469.4857.1 vs. uniprot
Match: A0A6A3BGE7_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BGE7_HIBSY)

HSP 1 Score: 63.5 bits (153), Expect = 5.300e-9
Identity = 47/140 (33.57%), Postives = 72/140 (51.43%), Query Frame = 0
Query:    1 CFNCGKGGHYARDCRA-SEESGATDNRKAAKGAILAKLTVPAVPEVGTIAAMVGAACGDRKEEWESDSGSTFHMSHTRAGMSAYKKASPGMTVEIADENTLQVDGFGRIEMDVDQPGHTTKRVKMDDVAYVPGISRNLLS 139
            C+NCGK GH+ RDCRA  +++GA ++    +             E G   AM+  +     E W  DSG++FH +  +  M  Y     G  V +AD+ TL++ G G I + +  P  TT   K+  V ++PG+ RNL+S
Sbjct:  233 CYNCGKKGHFKRDCRALKKDTGAQESANVTE-------------ETGD--AMI-LSVNSPIESWILDSGASFHSTPCQEIMENYVSGDFGK-VHLADDETLKIVGKGDIRLKL--PNQTTW--KLTGVRHIPGLKRNLIS 351          
BLAST of mRNA_H-elongata_contig181469.4857.1 vs. uniprot
Match: A0A6A3D2M2_HIBSY (Cytochrome P450 90B1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3D2M2_HIBSY)

HSP 1 Score: 63.5 bits (153), Expect = 5.330e-9
Identity = 47/140 (33.57%), Postives = 72/140 (51.43%), Query Frame = 0
Query:    1 CFNCGKGGHYARDCRA-SEESGATDNRKAAKGAILAKLTVPAVPEVGTIAAMVGAACGDRKEEWESDSGSTFHMSHTRAGMSAYKKASPGMTVEIADENTLQVDGFGRIEMDVDQPGHTTKRVKMDDVAYVPGISRNLLS 139
            C+NCGK GH+ RDCRA  +++GA ++    +             E G   AM+  +     E W  DSG++FH +  +  M  Y     G  V +AD+ TL++ G G I + +  P  TT   K+  V ++PG+ RNL+S
Sbjct:  557 CYNCGKKGHFKRDCRALKKDTGAQESANVTE-------------ETGD--AMI-LSVNSPIESWILDSGASFHSTPCQEIMENYVSGDFGK-VHLADDETLKIVGKGDIRLKL--PNQTTW--KLTGVRHIPGLKRNLIS 675          
BLAST of mRNA_H-elongata_contig181469.4857.1 vs. uniprot
Match: A0A6A3CZB7_HIBSY (Histidine kinase 5 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CZB7_HIBSY)

HSP 1 Score: 63.5 bits (153), Expect = 5.420e-9
Identity = 47/140 (33.57%), Postives = 72/140 (51.43%), Query Frame = 0
Query:    1 CFNCGKGGHYARDCRA-SEESGATDNRKAAKGAILAKLTVPAVPEVGTIAAMVGAACGDRKEEWESDSGSTFHMSHTRAGMSAYKKASPGMTVEIADENTLQVDGFGRIEMDVDQPGHTTKRVKMDDVAYVPGISRNLLS 139
            C+NCGK GH+ RDCRA  +++GA ++    +             E G   AM+  +     E W  DSG++FH +  +  M  Y     G  V +AD+ TL++ G G I + +  P  TT   K+  V ++PG+ RNL+S
Sbjct: 1078 CYNCGKKGHFKRDCRALKKDTGAQESANVTE-------------ETGD--AMI-LSVNSPIESWILDSGASFHSTPCQEIMENYVSGDFGK-VHLADDETLKIVGKGDIRLKL--PNQTTW--KLTGVRHIPGLKRNLIS 1196          
BLAST of mRNA_H-elongata_contig181469.4857.1 vs. uniprot
Match: A0A6A3D123_HIBSY (CCHC-type domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3D123_HIBSY)

HSP 1 Score: 63.2 bits (152), Expect = 7.090e-9
Identity = 49/140 (35.00%), Postives = 75/140 (53.57%), Query Frame = 0
Query:    1 CFNCGKGGHYARDCRASEES-GATDNRKAAKGAILAKLTVPAVPEVGTIAAMVGAACGDRKEEWESDSGSTFHMSHTRAGMSAYKKASPGMTVEIADENTLQVDGFGRIEMDVDQPGHTTKRVKMDDVAYVPGISRNLLS 139
            C+NCGK GH+ RDCRA +++ GA ++         A +T     E G   AM+  +     E W  DSG++FH +  +  M  Y  +  G  V +AD+ TL++ G G I + +  P  TT   K+  V ++PG+ RNL+S
Sbjct:  139 CYNCGKKGHFKRDCRAPKKNTGAQES---------ANMT----DETGD--AMI-LSVNSPIESWILDSGASFHSTPCQEIMENYVSSDFGK-VHLADDETLKIVGKGDIRLKL--PNQTTW--KLTGVRHIPGLKRNLIS 257          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig181469.4857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A2XKG3_HIBSY2.100e-934.53Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A6A3BK95_HIBSY2.790e-935.25Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A6A2W9F3_HIBSY2.850e-935.25Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A6A2WXJ4_HIBSY2.890e-935.25F-box family protein n=1 Tax=Hibiscus syriacus Tax... [more]
A0A6A3AJH8_HIBSY2.900e-935.25Ion channel CASTOR n=1 Tax=Hibiscus syriacus TaxID... [more]
A0A6A3B0Z1_HIBSY5.230e-933.09CCHC-type domain-containing protein n=1 Tax=Hibisc... [more]
A0A6A3BGE7_HIBSY5.300e-933.57Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A6A3D2M2_HIBSY5.330e-933.57Cytochrome P450 90B1 n=1 Tax=Hibiscus syriacus Tax... [more]
A0A6A3CZB7_HIBSY5.420e-933.57Histidine kinase 5 n=1 Tax=Hibiscus syriacus TaxID... [more]
A0A6A3D123_HIBSY7.090e-935.00CCHC-type domain-containing protein n=1 Tax=Hibisc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 1..16
e-value: 0.0052
score: 25.3
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 1..15
e-value: 2.0E-5
score: 24.4
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 1..15
score: 10.971
NoneNo IPR availableGENE3D4.10.60.10coord: 1..35
e-value: 2.9E-6
score: 29.4
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig181469contigH-elongata_contig181469:696..1226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig181469.4857.1mRNA_H-elongata_contig181469.4857.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig181469 696..1226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig181469.4857.1 ID=prot_H-elongata_contig181469.4857.1|Name=mRNA_H-elongata_contig181469.4857.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
CFNCGKGGHYARDCRASEESGATDNRKAAKGAILAKLTVPAVPEVGTIAA
MVGAACGDRKEEWESDSGSTFHMSHTRAGMSAYKKASPGMTVEIADENTL
QVDGFGRIEMDVDQPGHTTKRVKMDDVAYVPGISRNLLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf