mRNA_H-elongata_contig18126.4846.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18126.4846.1
Unique NamemRNA_H-elongata_contig18126.4846.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: D8LRD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD0_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 2.970e-57
Identity = 104/150 (69.33%), Postives = 124/150 (82.67%), Query Frame = 1
Query:    1 KQTEADWIWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQ 450
            K+T  +W+WSRDP P+  S L R+L  V FK QV++RS+ +FVLMSTVTA+TVRTLLSSGVVIMFP+VMLLE +GL GV+++QMLALSYPWLG+PIEHLR+ NKP+G FIMGH+MQ     M VFY+VYNACLLAWS WLY KTM T LQ
Sbjct:   17 KKTGGEWMWSRDPDPS--SGLMRVLSAVAFKSQVLVRSLVAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQ-----MVVFYTVYNACLLAWSYWLYGKTMTTSLQ 159          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A6H5JH19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH19_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 7.650e-52
Identity = 102/152 (67.11%), Postives = 123/152 (80.92%), Query Frame = 1
Query:    4 QTEADWIWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQAKL 459
            +T  +W+WSRD  P+  S L R+L  V FK QVV+RS+ +F+LMSTVTA+TVRTLLSSGVVI+FP+VMLLE +GL GV+++QMLALSYPWLG+PIEHLR+ NKP+G FIMGH+MQ     M VFY+VYNACLLAWS WLY KTM T LQ  L
Sbjct:  382 KTGGEWMWSRDSDPS--SGLMRVLSAVAFKSQVVVRSLMAFLLMSTVTALTVRTLLSSGVVIIFPVVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHVMQ-----MVVFYTVYNACLLAWSYWLYGKTMTTSLQVWL 526          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S3Y6C3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C3_HETAK)

HSP 1 Score: 108 bits (270), Expect = 1.790e-24
Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 1
Query:    7 TEADWIWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQAKL 459
            T+ +W W +   P P      LL R+  K   ++ S+ +F LMS+VTA+ VR L+SSGVV MFPL   LE  GL G   R +L LSYPWLG P+E L+   KP G F+ GHL+     ++ V+Y++Y A  +AW+ WLY K+ P  L+  L
Sbjct:   35 TKEEWSWGKGELP-PAGGYSPLL-RLALKPLALLSSLLAFFLMSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFNQR-LLRLSYPWLGAPMEELQRRGKPTGPFVAGHLL-----KVVVYYALYEAAQVAWAQWLYGKSTPAGLEVWL 177          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S2AJJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJJ9_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.050e-24
Identity = 64/148 (43.24%), Postives = 91/148 (61.49%), Query Frame = 1
Query:    7 TEADWIWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQ 450
            T+  W W+             +L  +  K  VV+RS+ +F   STVTA+ VR L+SSGVVIMFPL+  L  LG   +++ Q+L +SYPWLG+P+E LR+ NKP+   I+ H++     R+ V YS+Y AC LAW  WLY K +P+ L+
Sbjct:   26 TKEAWSWTESTLALGYQNKRGVLEYLKAKAIVVLRSLLAFFFTSTVTALIVRMLISSGVVIMFPLLTGLRYLGCSAIDM-QILNMSYPWLGLPVERLRAQNKPVTPLIVAHMV-----RVVVLYSMYEACQLAWGIWLYDKPLPSGLE 167          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S4DCY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCY7_HETAK)

HSP 1 Score: 108 bits (270), Expect = 1.470e-23
Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 1
Query:    7 TEADWIWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQAKL 459
            T+ +W W +   P P      LL R+  K   ++ S+ +F LMS+VTA+ VR L+SSGVV MFPL   LE  GL G   R +L LSYPWLG P+E L+   KP G F+ GHL+     ++ V+Y++Y A  +AW+ WLY K+ P  L+  L
Sbjct:  223 TKEEWSWGKGELP-PAGGYSPLL-RLALKPLALLSSLLAFFLMSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFNQR-LLRLSYPWLGAPMEELQRRGKPTGPFVAGHLL-----KVVVYYALYEAAQVAWAQWLYGKSTPAGLEVWL 365          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A835YR56_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR56_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 6.310e-19
Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 1
Query:  109 RSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKT 432
            R++ +F ++S+VTA+ VR LLSSGV  MFP   LL  +G   ++ R +LA SYPW+G P++ LR  NKP G FIM HL+Q     + V+Y++YNA  +AW+ WLY K+
Sbjct:   15 RALLTFAVLSSVTALVVRMLLSSGVAAMFPFFALLRRMGFTDLDDR-VLAASYPWIGRPMQALRRQNKPTGPFIMAHLVQ-----VVVYYTLYNAVQVAWTMWLYDKS 116          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S2SN08_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SN08_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 9.430e-17
Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   22 IWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 438
            IWS D +         L  + + K+     SI SF L+S +TA+ VR L++SGV I FPL  L + LGL     RQ+L+LSYPWLG  IE L ++N+     +  HL       + ++Y++Y AC + WS WLY K+MP
Sbjct:  232 IWSWDKRDFDYLNYG-LFRKAVRKLAAFFMSILSFALVSQITALLVRVLVTSGVAITFPLFNLFQRLGL-NQHRRQLLSLSYPWLGAQIELLHTSNQSSNPLVSAHLFN-----VLLYYTMYEACQIVWSFWLYNKSMP 363          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S0XCD7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCD7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 9.660e-16
Identity = 49/119 (41.18%), Postives = 78/119 (65.55%), Query Frame = 1
Query:   82 VIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 438
            + F++ V+  S  SF ++ST++A+ VR L+SSGVV++FPL  +++     G+  R +++LSYPW+G+PIE LRS N+ I  FI+ H+      R+ V+Y +Y A  LA+S W Y  + P
Sbjct:  138 ITFRLMVLFVSFFSFFMLSTISALLVRILISSGVVLLFPLFWIVQRFTSHGISWR-IISLSYPWIGIPIEVLRSRNQSIEPFIIAHIC-----RIVVYYVLYEAAQLAFSVWFYNDSRP 250          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: F0YGC8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGC8_AURAN)

HSP 1 Score: 73.2 bits (178), Expect = 3.600e-11
Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 1
Query:   85 IFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGL---WGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 438
            +F+  V  +S+ +F  MST+TA+ +R L+SSGVV  F L   L S G    +G      L+LSYPWLG P+E LR+  +P   F+  H++     R+ + Y+ Y AC +A+S W Y    P
Sbjct:  248 VFRFGVAAKSLIAFFFMSTITALVIRVLVSSGVVAAFLLWYGLTSCGARLDFGA-----LSLSYPWLGAPLELLRAQRRPACPFVASHVV-----RVVLLYAAYEACQVAFSDWFYLGQRP 358          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S4VIQ3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VIQ3_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.560e-10
Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = 1
Query:    4 QTEADWIWSRDP-KPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 438
            +T+  W W +D  +P          +  + KI  +  +I SF L+ +VTA+ VR L +SGVVIMFPL     + GL G + R +L LSY W+G      R+     G     HL+ A   ++F++Y++Y AC  AWS  LY K++P
Sbjct:  580 KTKERWSWRKDLLEPTWKEEGSFFTYWCLSKIGNLALAILSFFLIMSVTALIVRVLTTSGVVIMFPLFACFRACGLPGADDR-ILNLSYSWIG----RARNAIDRRGIHTSWHLIAAHMAKIFLYYAMYEACQAAWSVVLYTKSVP 720          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LRD0_ECTSI2.970e-5769.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH19_9PHAE7.650e-5267.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3Y6C3_HETAK1.790e-2443.71Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2AJJ9_9STRA2.050e-2443.24Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4DCY7_HETAK1.470e-2343.71Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YR56_9STRA6.310e-1948.15Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2SN08_9STRA9.430e-1740.29Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S0XCD7_9STRA9.660e-1641.18Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
F0YGC8_AURAN3.600e-1138.84Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4VIQ3_9STRA1.560e-1036.30Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18126contigH-elongata_contig18126:84..2745 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score67.4
Seed ortholog evalue4.9e-09
Seed eggNOG ortholog44056.XP_009039419.1
Preferred nameTMEM259
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006950,GO:0008150,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0010941,GO:0012505,GO:0019222,GO:0030162,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0032268,GO:0032270,GO:0033554,GO:0034976,GO:0042176,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045732,GO:0045862,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0060255,GO:0060548,GO:0061136,GO:0065007,GO:0080090,GO:0080134,GO:0080135,GO:1901214,GO:1901215,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1904292,GO:1904294,GO:1905897,GO:1905898
EggNOG free text desc.positive regulation of ERAD pathway
EggNOG OGsKOG2092@1,KOG2092@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_002990.1
Exons4
Model size730
Cds size342
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18126.4846.1prot_H-elongata_contig18126.4846.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18126 744..2613 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930044.7889125-UTR-H-elongata_contig18126:83..3001622930044.7889125-UTR-H-elongata_contig18126:83..300Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18126 84..300 -
1691679259.319517-UTR-H-elongata_contig18126:83..3001691679259.319517-UTR-H-elongata_contig18126:83..300Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18126 84..300 -
1622930044.83342-UTR-H-elongata_contig18126:704..7431622930044.83342-UTR-H-elongata_contig18126:704..743Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18126 705..743 -
1691679259.3316576-UTR-H-elongata_contig18126:704..7431691679259.3316576-UTR-H-elongata_contig18126:704..743Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18126 705..743 -
1622930044.888386-UTR-H-elongata_contig18126:2613..27451622930044.888386-UTR-H-elongata_contig18126:2613..2745Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18126 2614..2745 -
1691679259.3817112-UTR-H-elongata_contig18126:2613..27451691679259.3817112-UTR-H-elongata_contig18126:2613..2745Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18126 2614..2745 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930044.84587-CDS-H-elongata_contig18126:743..8541622930044.84587-CDS-H-elongata_contig18126:743..854Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18126 744..854 -
1691679259.3514977-CDS-H-elongata_contig18126:743..8541691679259.3514977-CDS-H-elongata_contig18126:743..854Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18126 744..854 -
1622930044.860686-CDS-H-elongata_contig18126:1284..14011622930044.860686-CDS-H-elongata_contig18126:1284..1401Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18126 1285..1401 -
1691679259.3624647-CDS-H-elongata_contig18126:1284..14011691679259.3624647-CDS-H-elongata_contig18126:1284..1401Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18126 1285..1401 -
1622930044.8731017-CDS-H-elongata_contig18126:2499..26131622930044.8731017-CDS-H-elongata_contig18126:2499..2613Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18126 2500..2613 -
1691679259.3739793-CDS-H-elongata_contig18126:2499..26131691679259.3739793-CDS-H-elongata_contig18126:2499..2613Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18126 2500..2613 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18126.4846.1

>prot_H-elongata_contig18126.4846.1 ID=prot_H-elongata_contig18126.4846.1|Name=mRNA_H-elongata_contig18126.4846.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
MSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGV
PIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKT
MPTILQAKLLLIE*
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mRNA from alignment at H-elongata_contig18126:84..2745-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18126.4846.1 ID=mRNA_H-elongata_contig18126.4846.1|Name=mRNA_H-elongata_contig18126.4846.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2662bp|location=Sequence derived from alignment at H-elongata_contig18126:84..2745- (Himanthalia elongata Himel1 dioecious)
AAACAGACGGAAGCGGATTGGATATGGTCGAGGGACCCCAAGCCCGCGCC GTTGTCGCGCTTGGAGAGGCTGCTCTGGAGGGTAATATTCAAGATTCAGG TCGTGATTCGGTCGATAACGTCCTTTGTGCTCATGTCCACGGTGACTGCC ATGACCGTACGAACGCTGCTCAGCTCCGGTGTCGTGATCATGTTCCCCCT GGTGATGCTGTTGGAGAGTCTGGGACTGTGGGGGGTCGAACTGCGCGTGA GTGGTAACCGGAGGGGCGACGTTATTCGTGGCATGGCTAAAAAGAAAGTA GAGTAACCTCTACGGCTTTTGGGTGAAACCACTGGTTGGCTCAAGGGTCT CTCGAGCTCGCGTTTTTTTGTCACTATTAAAAAAATAGCACACATTTGAT CGTGTGTTTTATATTCGCGTTTTTCGGCTACCTTTTTTTCGCGCGTACTC TGTATCACCTAGCGGCAGCTTGAACCTCCACGAAAGAGGCGTAACAGACA GACCTCGCTCGCGCGCAACATTCCCGCTTGTAATTTTGCGCTTAAGCTCC CGCGCTGCAAGAGAAAAAATATTACGTGTTTTCAGTACGACTCGTGCGTC ACGACCTTTGCCCATCAAGCGGGCGGGTGCCGTGTTCGCGGTTACTACGA TCCTCGAAACCGAACAGCATCGTAGATATTCACGACCTTTCCCTTGGTCA TACGCTCAAAATTTGAACCCCTCATCCCATCCTGACGAACAAAAATCCGG GGTACCCCTCCGTTCTGACGTCCCGGCACTTGTTAAGATGCGTGGGATTG ATTTAGTCATATAGAATATGCGGTATCCGTTTAACATAAGTACTAACCAC CTTCCCCCTGCTGATCAACAATAAAATTAAGTCTTTTATCAATAAAAATA ATCAATTGTTCTATACAATAGAGCCCGAATTACATCTCAACCCCTAATAT CATCAGTTACCATTGTTTATGCTTATTCCTACTTCCTGATAGTTGGTCCC CTGGATTGCACCTCTTATGGTGCCAAGAAGGCGTGGATGTTCGGAGAGTA AGAATGAGCCCAAAGTATTTTATAAATATAATACATCCCACCTCTTCCGC CAACCCACCCCCTCTCGTAATGCCAAACGTTCAACGACAACAAAAAACGA CTACACAACATTTTTTTTTTTAAACTTGCCTCTGAAAGGTTCGAGGTAGG GTTGTAGGGGGTTGTGCGCGCTGTGTAACCCCTCTTCTCCTGCCGCCGCC GCCGCCGTGCCGGTGGCGGCGCTTCCACACGCCAATCCATGAAAGCCCAA ACGCCTTCCCATCGTTTGGAACGCCTGGGGTATTTTCCTTGCAGCAGATG CTCGCTCTTTCTTATCCGTGGCTAGGGGTGCCGATCGAGCACCTCCGGAG CAACAACAAACCGATCGGTAGCTTCATCATGGGCCACCTAATGCAGGCGA GAGACGAGCGAGTTATGGTCGTGTTATTCTGTGCGCCTTGCGGTTCTCGT CCCGTTTCCCTGTGTCCCTGCTGTGGAGAACTATTTGATGTCTACCCGTC CCTAGCTATTGATAGGAGCTATTGCCCACGGCACTCTTGCATGTTTTGTT GTATATATTTTGGAGAATGAATATATATTTATGTAACCCCCCCCCTCCCC GTCCTACCCAATCCTCGAAAGATTTAACTTTGAGATATTATTTAAGGTTA CGTTCCCCGACTCTCGAAACTAGCGTGGATTTACTTGCCTGGGAGTTGCG TGGATGTCCTCTCCCTCTCAAAAGCCTTCACGCCAGCGTCGTTTACGCCG AACCTCGTGTGTCGCTCAAACTAACCTGTTCGTGTGTCTTGTCCATGGGC ATGCGTTGTGTTCTACCCCGTGTCGCCAACTCCGTCTACAGATGTTTGTG TTCTACTCCGTCTACAACGCGTGTCTGCTGGCGTGGTCATCCTGGCTGTA CGCGAAGACCATGCCCACAATCCTCCAGGCAAAACTACTATTAATAGAGT AGCGAATCAAAGCGATCAAGCGGCACGTAAAAGCTCACCGGGTGTTTGTT CGTCATTTGGTGATCTCCCGATCTCTTGTCGAGAGACGCAACGCTTCGGG AAATGTTGTGCGCGGTGTTGTGGCCGTCTGGTGCCGATGCGGTGAAAGGA TGGTGGGGGGGGCCAGCATAGATATCGTTTGACGTTTATTGTTTTGATGT CCTCTAGTCGGAAGCGGGGGCAAAAAAAACAGAAACAGAAAAAAATCCCA TTGCAGCAAAAGTGGTACGACACACTGCGCGCGCAAATTGCCAGTTTAAT ACCCCGCCTACTTTTTAACAAGCCGAAACGAAGCCCCGCCCCTCCTTCCA CCGCCTTCTTTGGTTTCTTTTTTTTAGGTGTGGTTGTACGGCATGGTGAT GTTGTGGGAGTACTTCGCTCTCATCTTCGTGAGGGCCCGATCAAGCATTG TGTTCTTCTCCCGCGCGGCGGCCCTGTCGTTCGTGGCGTTCCACGTCTAC TTCTACCACTTCCAGCTGGGCTACTTCCGCATCGCTGTGGCCGCAGCGTT CACCGCTATGCTCGCCGTGAAGCTCTACGTCTTGCGGGCGATCGAGCTGC CGGCCTTCATGAGCGGGGACGTTTCGCACGAGCATCCCCGGGCGCACTAC GTCGAGCTTCCC
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Coding sequence (CDS) from alignment at H-elongata_contig18126:84..2745-

>mRNA_H-elongata_contig18126.4846.1 ID=mRNA_H-elongata_contig18126.4846.1|Name=mRNA_H-elongata_contig18126.4846.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at H-elongata_contig18126:84..2745- (Himanthalia elongata Himel1 dioecious)
ATGTCCACGGTGACTGCCATGACCGTACGAACGCTGCTCAGCTCCGGTGT
CGTGATCATGTTCCCCCTGGTGATGCTGTTGGAGAGTCTGGGACTGTGGG
GGGTCGAACTGCGCATGTCCACGGTGACTGCCATGACCGTACGAACGCTG
CTCAGCTCCGGTGTCGTGATCATGTTCCCCCTGGTGATGCTGTTGGAGAG
TCTGGGACTGTGGGGGGTCGAACTGCGCCAGATGCTCGCTCTTTCTTATC
CGTGGCTAGGGGTGCCGATCGAGCACCTCCGGAGCAACAACAAACCGATC
GGTAGCTTCATCATGGGCCACCTAATGCAGGCGAGAGACGAGCGACAGAT
GCTCGCTCTTTCTTATCCGTGGCTAGGGGTGCCGATCGAGCACCTCCGGA
GCAACAACAAACCGATCGGTAGCTTCATCATGGGCCACCTAATGCAGGCG
AGAGACGAGCGAATGTTTGTGTTCTACTCCGTCTACAACGCGTGTCTGCT
GGCGTGGTCATCCTGGCTGTACGCGAAGACCATGCCCACAATCCTCCAGG
CAAAACTACTATTAATAGAGTAGATGTTTGTGTTCTACTCCGTCTACAAC
GCGTGTCTGCTGGCGTGGTCATCCTGGCTGTACGCGAAGACCATGCCCAC
AATCCTCCAGGCAAAACTACTATTAATAGAGTAG
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