mRNA_H-elongata_contig18116.4839.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18116.4839.1 vs. uniprot
Match: D8LTT1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT1_ECTSI) HSP 1 Score: 224 bits (571), Expect = 9.210e-64 Identity = 117/231 (50.65%), Postives = 158/231 (68.40%), Query Frame = 1
Query: 16 HGAQELLQSVNSDMWTPLMIACDAGSLETVRVLVDAGANLNAHDKDSRTVLDIAVSRNHLLLVCYLRTEGAFSSTEFWHARRAAGDAPRLTGILETHKHMVHTLDNNGRTALLLACVGGQVDVVKALVDAGADVNFRDPSGMSPLSVASVIGNVPLARYLMHNDKVNLSARNNAGWTPLMQAVVKGDLTMASRFLIDRGASVNDASFDEESVFDLARRLAGPEIQQYIASK 708
+GA++LL S NSDMWTPLM+ACDAGSL TV+VLV+AGA+L + + ++ T LDIA RNHLL+ CYLRTEGA +S +FW A A GDA ++ +L + H+V +LD +GRTALL +C+GG ++V + LV+AGADV+F+D SG SPL VA+V+GN L RYL+ L+ +N RGA+VND S ESV D+ARR +GPE+Q+Y+A+K
Sbjct: 868 NGAKDLLHSTNSDMWTPLMVACDAGSLATVQVLVEAGADLASFNNENLTALDIAADRNHLLVECYLRTEGAVTSDQFWSAADA-GDAATISKLLRGNGHLVTSLDKDGRTALLRSCIGGHLEVARLLVEAGADVDFQDSSGTSPLGVAAVLGNKELTRYLVQIGGARLTLKNKVXXXXXXXXXXXXXXXXXXXXXX-RGAAVNDGSPAGESVLDMARRFSGPELQRYLAAK 1096
BLAST of mRNA_H-elongata_contig18116.4839.1 vs. uniprot
Match: A0A6H5KQW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQW0_9PHAE) HSP 1 Score: 186 bits (472), Expect = 2.070e-50 Identity = 103/207 (49.76%), Postives = 139/207 (67.15%), Query Frame = 1
Query: 16 HGAQELLQSVNSDMWTPLMIACDAGSLETVRVLVDAGANLNAHDKDSRTVLDIAVSRNHLLLVCYLRTEGAFSSTEFWHARRAAGDAPRLTGILETHKHMVHTLDNNGRTALLLACVGGQVDVVKALVDAGAD----------VNFR----DPSGMSPLSVASVIGNVPLA-----RYLMHNDKVNLSARNNAGWTPLMQAVVKGDL 579
+GA++L+ S NSDMWTPLM+ACDAGSL TV+VLV+AGA+L + + ++ T LDIA RNHLL+ CYLRTEGA +S +FW A + GDA ++ +L + H+V +LD NGRTALL +C+GG ++V + LV+AGAD NF D S + P + + + +V LA RYL+ L+ +N GWTPLMQAVVKGDL
Sbjct: 865 NGAKDLIHSTNSDMWTPLMVACDAGSLATVQVLVEAGADLASFNNENLTALDIAADRNHLLVECYLRTEGAVTSDQFWSAADS-GDAATISKLLRGNGHLVMSLDKNGRTALLRSCIGGHLEVARLLVEAGADGIAPLGDGGVPNFTTDKGDTSSVKPRN-SHPLPDVLLAFVMERRYLVQIGGARLTLKNKVGWTPLMQAVVKGDL 1069
BLAST of mRNA_H-elongata_contig18116.4839.1 vs. uniprot
Match: A0A0B7N6H4_9FUNG (Abhydrolase_3 domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7N6H4_9FUNG) HSP 1 Score: 91.3 bits (225), Expect = 1.900e-17 Identity = 67/219 (30.59%), Postives = 112/219 (51.14%), Query Frame = 1
Query: 58 WTPLMIACDAGSLETVRVLVDAGANLNAHDKDSRTVLDIAVSRNHLLLVCYLRTEGAFSSTEFWHARRAAGDAPRLTGILETHKHMVHTL--------------DNNGRTALLLACVGGQVDVVKALVDAGADVNFRDPSGMSPLSVASVIGNVPLARYLMHNDKVNLSARNNAG-WTPLMQAVVKGDLTMASRFLIDRGASVNDASFDEE--SVFDLA 663
WTP+MIA G LE V++L ++GA LN KD RT L +AV H+ L YL + + T+ ++ R A ++G + + L DN+GR LL + V ++++K L+D GAD N D G + + A+++G++ + R L D ++ +A + WTPLM + +G + ++LI+ VN D++ + +DLA
Sbjct: 106 WTPVMIAAMKGKLEIVKLLTESGALLNRKTKDGRTALYLAVQEGHVELSKYLADQYPAAITQATNSGRYPLQAAAISGTQAAFEATCYLLSHATINLPTILAHRDNSGRNILLDSAVSQNLELLKFLLDQGADANDADSLGRNMIHHAAMVGHLSVLRMLNTLDGLDWNAPDTWDFWTPLMHSARQGHFNIV-KYLIET-IKVNPNIKDKQGRTAYDLA 322
BLAST of mRNA_H-elongata_contig18116.4839.1 vs. uniprot
Match: A0A8H7UL56_9FUNG (Uncharacterized protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7UL56_9FUNG) HSP 1 Score: 86.3 bits (212), Expect = 3.450e-16 Identity = 63/199 (31.66%), Postives = 106/199 (53.27%), Query Frame = 1
Query: 58 WTPLMIACDAGSLETVRVLVDAGANLNAHDKDSRTVLDIAVSRNHLLLVCYLRTEGAFSSTEFWHARR---AAGDAPRLTGILETHKHMV-HTL----------DNNGRTALLLACVGGQVDVVKALVDAGADVNFRDPSGMSPLSVASVIGNVPLARYL-MHNDKVNLSARNNAG-WTPLMQAVVKGDLTMASRFLID 606
WTP+MIA G+L+ V +L ++GA LN KD RT L +AV H+ L YL + + T+ ++ R A A G E ++++ H + DN+GR LL + V ++++K L+D GAD N D G + + A+++G++ + + L + +N A++ WTPLM A +G L + ++LI+
Sbjct: 106 WTPVMIAAMKGNLDIVSLLTESGALLNRQTKDGRTALYLAVQEGHVELSKYLTDQYPAAITQATNSGRFPTQAAAALTTCGAFEITQYLLSHAMIPLPNLLAHRDNSGRNILLDSAVSQSLELLKFLLDQGADANDADSLGRNMIHHAAMMGHLNVLKMLNTSTEGLNWDAQDAWDFWTPLMHAAREGHLDIV-KYLIE 303
BLAST of mRNA_H-elongata_contig18116.4839.1 vs. uniprot
Match: A0A7R8WIW9_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WIW9_9CRUS) HSP 1 Score: 81.3 bits (199), Expect = 6.110e-14 Identity = 78/237 (32.91%), Postives = 107/237 (45.15%), Query Frame = 1
Query: 10 LQHGAQELLQSVNSDMW--TPLMIACDAGS----------LETVRVLVDAGANLNAHDKDSRTVLDIAVSRNHLLLVCYLRT-----------EGAFSSTEFWHARRAAGDAPRLTGILETHKHMVHTLDNNGRTALLLACVGG---------QVDVVKALVDAGADVNFRDPSGMSPLSVASVIGNVPLARYLMHNDKVNLSARNNAGWTPLMQAVVKGDLTMASRFLIDRGASVN 624
LQ GAQ + D W TPL++A S L+ V++LVDAGAN+ DKD + L A HL + +L T +G S T R + IL H V DN RT+LLLA +GG Q+ VK L++AGA+V RD SG + L A+ + +A+YL+ D +N+ G T L A K + S FL+ GA V+
Sbjct: 952 LQQGAQVDAE----DGWKRTPLLLAIGWSSSSYFPNEQDRLQVVKILVDAGANIRHCDKDGNSALHYATKNCHLSIAQHLLTIDPSLCLVKNSQGKISLTL---QRAVEWGNSAVISILIQHGAQVDEEDNEKRTSLLLA-IGGDSSLSHEKNQLQCVKVLIEAGANVLHRDSSGHNALRYATRKHYMSIAQYLLTVDPSLCRVKNSQGKTELHNAADKAQPALIS-FLLQHGADVD 1179
BLAST of mRNA_H-elongata_contig18116.4839.1 vs. uniprot
Match: A0A3P4LCZ8_GULGU (Pre-SET domain-containing protein (Fragment) n=1 Tax=Gulo gulo TaxID=48420 RepID=A0A3P4LCZ8_GULGU) HSP 1 Score: 80.1 bits (196), Expect = 1.240e-13 Identity = 71/223 (31.84%), Postives = 102/223 (45.74%), Query Frame = 1
Query: 7 MLQHGAQELLQSVNSDMWTPLMIACDAGSLETVRVLVDAGANLNAHDKDSRTVLDIAVSRNHLLLVCYLRTEGAF-----SSTEFWHARRAAGDAPRLTGILETHKHMVHTLDNNGRTALLLACVGGQVDVVKALVDAGADVNFRDPSGMSPLSVASVIGNVPLARYLMHNDKVNLSARNNAGWTPLMQAVVKGDLTMASRFLIDRGASVNDASFDEESVFDL 660
ML QS TPL A GS+E VL+ AGAN+NA DK RT L AV NHL Y+ ST HA + G+ ++ +L T + V+ D+ G T ++ A ++V++ L+ GADV D L AS G+ +A L+ N + +L A N G TPL A + FL RGA+ + + ++ +DL
Sbjct: 285 MLLDNLDPNFQSDQQSKRTPLHAAAQKGSVEICHVLLQAGANINAVDKQQRTPLMEAVVNNHLEAARYMVQRRPLPQEEDGSTCLHHAAKI-GNLEMVSLLLSTGQVDVNAQDSGGWTPIIWAAEHKHIEVIRMLLTRGADVTLTDNEENICLHWASFTGSAAIAEVLL-NARCDLHAVNYHGDTPLHIAARESYHDCVLLFL-SRGANPELRNKEGDTAWDL 504
BLAST of mRNA_H-elongata_contig18116.4839.1 vs. uniprot
Match: UPI001EB0A008 (uncharacterized protein LOC124148037 isoform X1 n=4 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB0A008) HSP 1 Score: 79.3 bits (194), Expect = 2.820e-13 Identity = 65/229 (28.38%), Postives = 110/229 (48.03%), Query Frame = 1
Query: 34 LQSVNSDMWTPLMIACDAGSLETVRVLVDAGANLNAHDKDSRTVLDIAVSRNHLLLVCYLRTEGAFSSTEFWHARR-----AAGDAPRLTGILETHKHMVHTLDNNGRTALLLACVGGQVDVVKALVDAGADVNFRDPSGMSPLSVASVIGNVPLARYLMHNDKVNLSARNNAGWTPLMQAVVKGDLTMASRFLIDRGASVNDASFDEESVFDLARRLAGPEIQQYIAS 705
L V++D + L AC G++ V+ L+ + +N+N + T + +A H + +L ++GA S AGD + L + + ++ NGRT +++A V G V L GAD++ D G S L +A GN+ + ++L+ + +N +N GWTP+M A VKG +M FL+ +GA ++ D S+ LA + I Q + S
Sbjct: 1780 LSLVDTDGDSLLHFACAGGNMTIVQHLM-SDSNINQRGVNGWTPIMVAAFNGHKSVFDFLVSKGADLSLVHTDGNSLLHLACAGDNMTIVQHLISDSN-INQRGRNGRTPIMVAAVKGHKSVFDFLESKGADLSLVDTDGDSLLHLAFQEGNMTIVQHLISDSNINQRGKN--GWTPIMDAAVKGHKSMFD-FLVSKGADLSLVDTDGNSLLYLACQGGNMAIVQRLIS 2003
BLAST of mRNA_H-elongata_contig18116.4839.1 vs. uniprot
Match: A0A8C7BBX1_NEOVI (Euchromatic histone lysine methyltransferase 2 n=1 Tax=Neovison vison TaxID=452646 RepID=A0A8C7BBX1_NEOVI) HSP 1 Score: 78.6 bits (192), Expect = 4.760e-13 Identity = 69/218 (31.65%), Postives = 96/218 (44.04%), Query Frame = 1
Query: 7 MLQHGAQELLQSVNSDMWTPLMIACDAGSLETVRVLVDAGANLNAHDKDSRTVLDIAVSRNHLLLVCYLRTEGAFSSTEFWHARRAAGDAPRLTGILETHKHMVHTLDNNGRTALLLACVGGQVDVVKALVDAGADVNFRDPSGMSPLSVASVIGNVPLARYLMHNDKVNLSARNNAGWTPLMQAVVKGDLTMASRFLIDRGASVNDASFDEESVFDL 660
ML QS TPL A GS+E VL+ AGAN+NA DK RT L AV NHL Y+ G ++ AGD+ T L D+ G T ++ A ++V++ L+ GADV D L AS G+ +A L+ N + +L A N G TPL A + FL RGA+ + + ++ +DL
Sbjct: 641 MLLDNLDPNFQSDQQSKRTPLHAAAQKGSVEICHVLLQAGANINAVDKQQRTPLMEAVVNNHLEAARYMVQRGGCVYSKVLLGGPWAGDSGLSTSSLSPRPQ-----DSGGWTPIIWAAEHKHIEVIRMLLTRGADVTLTDNEENICLHWASFTGSAAIAEVLL-NARCDLHAVNYHGDTPLHIAARESYHDCVLLFL-SRGANPELRNKEGDTAWDL 851
BLAST of mRNA_H-elongata_contig18116.4839.1 vs. uniprot
Match: A0A8C7ERQ1_NEOVI (Euchromatic histone lysine methyltransferase 2 n=1 Tax=Neovison vison TaxID=452646 RepID=A0A8C7ERQ1_NEOVI) HSP 1 Score: 78.6 bits (192), Expect = 4.770e-13 Identity = 69/218 (31.65%), Postives = 96/218 (44.04%), Query Frame = 1
Query: 7 MLQHGAQELLQSVNSDMWTPLMIACDAGSLETVRVLVDAGANLNAHDKDSRTVLDIAVSRNHLLLVCYLRTEGAFSSTEFWHARRAAGDAPRLTGILETHKHMVHTLDNNGRTALLLACVGGQVDVVKALVDAGADVNFRDPSGMSPLSVASVIGNVPLARYLMHNDKVNLSARNNAGWTPLMQAVVKGDLTMASRFLIDRGASVNDASFDEESVFDL 660
ML QS TPL A GS+E VL+ AGAN+NA DK RT L AV NHL Y+ G ++ AGD+ T L D+ G T ++ A ++V++ L+ GADV D L AS G+ +A L+ N + +L A N G TPL A + FL RGA+ + + ++ +DL
Sbjct: 650 MLLDNLDPNFQSDQQSKRTPLHAAAQKGSVEICHVLLQAGANINAVDKQQRTPLMEAVVNNHLEAARYMVQRGGCVYSKVLLGGPWAGDSGLSTSSLSPRPQ-----DSGGWTPIIWAAEHKHIEVIRMLLTRGADVTLTDNEENICLHWASFTGSAAIAEVLL-NARCDLHAVNYHGDTPLHIAARESYHDCVLLFL-SRGANPELRNKEGDTAWDL 860
BLAST of mRNA_H-elongata_contig18116.4839.1 vs. uniprot
Match: UPI00159C94F0 (histone-lysine N-methyltransferase EHMT2 isoform X1 n=2 Tax=Hippoglossus stenolepis TaxID=195615 RepID=UPI00159C94F0) HSP 1 Score: 78.6 bits (192), Expect = 4.790e-13 Identity = 65/195 (33.33%), Postives = 96/195 (49.23%), Query Frame = 1
Query: 7 MLQHGAQELLQSVNSDMWTPLMIACDAGSLETVRVLVDAGANLNAHDKDSRTVLDIAVSRNHLLLVCYLRTEGAF-------SSTEFWHARRAAGDAPRLTGILETHKHMVHTLDNNGRTALLLACVGGQVDVVKALVDAGADVNFRDPSGMS--PLSV----ASVIGNVPLARYLMHNDKVNLSARNNAGWTPL 552
ML G Q + + + L A G LE +LV AGA ++A DKD RT L A+ NH+ + YL A T HA + G+ ++ +LET + V+ D+ G T ++ A VDV+K L++ GADV D S +S L+V A+ GNV +A ++ N +L++ N G TPL
Sbjct: 668 MLMEGIDPTYQPDSQNRRSALHAAAQRGLLEVCYMLVQAGAQVDAQDKDLRTPLVEAIINNHIEVARYLVQNSACVYHVEEDGYTGLHHAAKQ-GNLEMVSMLLETGQVDVNAQDSGGWTPIIWAAEHKHVDVIKVLLNRGADVTINDKSPLSLQELNVCLHWAAYAGNVDIAELVL-NAGCSLASVNMHGDTPL 860 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18116.4839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18116.4839.1 >prot_H-elongata_contig18116.4839.1 ID=prot_H-elongata_contig18116.4839.1|Name=mRNA_H-elongata_contig18116.4839.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=234bp MLQHGAQELLQSVNSDMWTPLMIACDAGSLETVRVLVDAGANLNAHDKDSback to top mRNA from alignment at H-elongata_contig18116:889..4137+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18116.4839.1 ID=mRNA_H-elongata_contig18116.4839.1|Name=mRNA_H-elongata_contig18116.4839.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3249bp|location=Sequence derived from alignment at H-elongata_contig18116:889..4137+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18116:889..4137+ >mRNA_H-elongata_contig18116.4839.1 ID=mRNA_H-elongata_contig18116.4839.1|Name=mRNA_H-elongata_contig18116.4839.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1404bp|location=Sequence derived from alignment at H-elongata_contig18116:889..4137+ (Himanthalia elongata Himel1 dioecious)back to top |