prot_H-elongata_contig18105.4835.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18105.4835.1
Unique Nameprot_H-elongata_contig18105.4835.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length231
Homology
BLAST of mRNA_H-elongata_contig18105.4835.1 vs. uniprot
Match: D7FW98_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW98_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 8.010e-37
Identity = 106/207 (51.21%), Postives = 119/207 (57.49%), Query Frame = 0
Query:   27 VWNRRKQEWMEVDDDGAVTPQKGAASPTNP--FSSNTLSSGLQKNPTDSSSVYKPATRSHAPPGGVTSISFGD-YMGPTATPAPAKAAPVNPAQVGAAPXXXXXPTTPESAASTQDVLAPIHMMELPQGAEDEEEEAGDKXXXXGETVALVPPPPVQPKPETATVPRAVSSNAYASGTNQNSGNFMTGRPTTRVRAPPGGASSITFG 230
            VWNRRKQ+W+EVD       +  AASPT+    SSN  +SG+ +N   +    KP TR HAPPGG +SISFGD + GPTA  A A        Q G        PTTPESA ST++  API MMELP  A          XXXX                        VSSNAYASG+NQNSGNFMTGRPTTRVRAPPGGASSITFG
Sbjct:    2 VWNRRKQQWIEVDVTEESPSKAAAASPTSSTALSSNAYASGVNQN-AGNFLTDKPITRIHAPPGGASSISFGDQHTGPTA--AAAGVTTKTQDQQGLVLGTPTQPTTPESAESTEEGPAPIPMMELPP-APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSITFG 204          
BLAST of mRNA_H-elongata_contig18105.4835.1 vs. uniprot
Match: A0A7S2RVM1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RVM1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.660e-9
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0
Query:  192 VSSNAYASGTNQNSGNFMTGRPTTRVRAPPGGASSITFG 230
            VSSNAYA+G+NQN GNF+T RPTTRV APPGG S+ITFG
Sbjct:  197 VSSNAYATGSNQNCGNFITERPTTRVHAPPGGVSNITFG 235          
BLAST of mRNA_H-elongata_contig18105.4835.1 vs. uniprot
Match: A0A2R5GBR3_9STRA (Protein SPIRAL1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBR3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.730e-9
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
Query:  192 VSSNAYASGTNQNSGNFMTGRPTTRVRAPPGGASSITFG 230
            VSSNA+ASG+N N+GNF+T RPTTRV APPGG S ITFG
Sbjct:  104 VSSNAFASGSNMNAGNFITDRPTTRVHAPPGGRSQITFG 142          
BLAST of mRNA_H-elongata_contig18105.4835.1 vs. uniprot
Match: A0A8J1ZRW8_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1ZRW8_9DINO)

HSP 1 Score: 63.5 bits (153), Expect = 2.720e-8
Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0
Query:  184 ETATVPRAVSSNAYASGTNQNSGNFMTGRPTTRVRAPPGGASSITFG 230
            +TA     VS+N YA G++QNSGN MTG PTTRV APPGG SSI FG
Sbjct:   20 DTADTGAPVSANRYARGSDQNSGNMMTGHPTTRVHAPPGGKSSIVFG 66          
BLAST of mRNA_H-elongata_contig18105.4835.1 vs. uniprot
Match: A0A2R5GNM1_9STRA (Pentafunctional AROM polypeptide n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNM1_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 5.610e-8
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 0
Query:  186 ATVPRAVSSNAYASGTNQNSGNFMTGRPTTRVRAPPGGASSITFG 230
            A  P   S+N++ASG +QNS NFMTGRPTTRV  PPGGASSI FG
Sbjct:  406 AAPPSPPSANSFASGAHQNSENFMTGRPTTRVHQPPGGASSIIFG 450          
BLAST of mRNA_H-elongata_contig18105.4835.1 vs. uniprot
Match: A0A5D6XR02_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR02_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.030e-7
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0
Query:  190 RAVSSNAYASGTNQNSGNFMTGRPTTRVRAPPGGASSITFG 230
            R +SSN+YA+GTNQN+GN +T R  TR+ APPGG SSITFG
Sbjct:  147 RQMSSNSYATGTNQNAGNMLTERRITRIHAPPGGKSSITFG 187          
BLAST of mRNA_H-elongata_contig18105.4835.1 vs. uniprot
Match: A4RZ02_OSTLU (SAP domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RZ02_OSTLU)

HSP 1 Score: 61.6 bits (148), Expect = 1.530e-7
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0
Query:  193 SSNAYASGTNQNSGNFMTGRPTTRVRAPPGGASSITFG 230
            SSNA+ASG NQNSGN +T RPTTR  APPGG SSI+FG
Sbjct:    3 SSNAFASGANQNSGNVLTDRPTTRTHAPPGGRSSISFG 40          
BLAST of mRNA_H-elongata_contig18105.4835.1 vs. uniprot
Match: K3X8R6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8R6_GLOUD)

HSP 1 Score: 57.8 bits (138), Expect = 5.690e-7
Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
Query:  190 RAVSSNAYASGTNQNSGNFMTGRPTTRVRAPPGGASSITFG 230
            R  SSN+YA+G+NQN+GN +T R  TR+ APPGG SSITFG
Sbjct:  115 RERSSNSYANGSNQNAGNVLTDRRITRIHAPPGGTSSITFG 155          
BLAST of mRNA_H-elongata_contig18105.4835.1 vs. uniprot
Match: C1MUJ1_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MUJ1_MICPC)

HSP 1 Score: 59.7 bits (143), Expect = 5.700e-7
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0
Query:  190 RAVSSNAYASGTNQNSGNFMTGRPTTRVRAPPGGASSITFG 230
            RAVSSNAYA+G +QN GN++T RP+TR+ APPGG S I+ G
Sbjct:   94 RAVSSNAYANGADQNCGNYITDRPSTRLHAPPGGVSQISLG 134          
BLAST of mRNA_H-elongata_contig18105.4835.1 vs. uniprot
Match: A0A7S0X2V9_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X2V9_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 6.510e-7
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:  191 AVSSNAYASGTNQNSGNFMTGRPTTRVRAPPGGASSITFG 230
            A SSNA+A+G++QN+GNF+T RPTTR+ APPGG S I+FG
Sbjct:  120 AASSNAFANGSDQNNGNFITDRPTTRLHAPPGGHSQISFG 159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18105.4835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW98_ECTSI8.010e-3751.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RVM1_9STRA1.660e-979.49Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2R5GBR3_9STRA1.730e-976.92Protein SPIRAL1 n=1 Tax=Hondaea fermentalgiana Tax... [more]
A0A8J1ZRW8_9DINO2.720e-865.96Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A2R5GNM1_9STRA5.610e-868.89Pentafunctional AROM polypeptide n=1 Tax=Hondaea f... [more]
A0A5D6XR02_9STRA1.030e-768.29Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A4RZ02_OSTLU1.530e-776.32SAP domain-containing protein n=1 Tax=Ostreococcus... [more]
K3X8R6_GLOUD5.690e-765.85Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
C1MUJ1_MICPC5.700e-765.85Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S0X2V9_9CHLO6.510e-767.50Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039613Protein SPIRAL1-likePANTHERPTHR33403FAMILY NOT NAMEDcoord: 82..230
NoneNo IPR availablePANTHERPTHR33403:SF5PROTEIN SPIRAL1-LIKE 1-RELATEDcoord: 82..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18105contigH-elongata_contig18105:1905..3200 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18105.4835.1mRNA_H-elongata_contig18105.4835.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18105 1905..4775 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18105.4835.1 ID=prot_H-elongata_contig18105.4835.1|Name=mRNA_H-elongata_contig18105.4835.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=231bp
MSRGHVSQTTLSLGGSGSAVTPGKKKVWNRRKQEWMEVDDDGAVTPQKGA
ASPTNPFSSNTLSSGLQKNPTDSSSVYKPATRSHAPPGGVTSISFGDYMG
PTATPAPAKAAPVNPAQVGAAPATPTQPTTPESAASTQDVLAPIHMMELP
QGAEDEEEEAGDKDKKEGETVALVPPPPVQPKPETATVPRAVSSNAYASG
TNQNSGNFMTGRPTTRVRAPPGGASSITFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039613SPR1/2/3/4/5