mRNA_H-elongata_contig18096.4830.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18096.4830.1 vs. uniprot
Match: D7FQ18_ECTSI (Putative tRNA isopentenyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ18_ECTSI) HSP 1 Score: 555 bits (1431), Expect = 7.330e-189 Identity = 290/469 (61.83%), Postives = 346/469 (73.77%), Query Frame = 3
Query: 348 AGPTATGKSSIALELCKQLGGELVSCDSVQVYRDLSIGCNKPTEEDMREVRHHLVDIAALSETFTAGDFVAQAQGAIDDILARGRVPVVVGGTMMYVQWLVHGKPDAPKKDHTVAQAVAKELLPFYEGGDWDGALQILATASETRAASLSRNDWYRLSRSLEVLRSAG--GEKSFTGAREPLGPKYDFRSFFIVGDRERLFRRIDRRCEEMVKRGLLSEVAGLLDRGILDPASPAGRAIGYRQTIEFLQQEAKLAE----------GNEVRSPPKTDERSEHVGDPDSRFLQFLMTFTAKTRQYAADQIKWFRSPKGRDFCWRTWDLGGPIKEGLCR---GTRNGRDVLS------VRTGDGCSWQRVAKSIAESYKLSREAFDEELGGDYQESVRVENQMRAKDMKRYATELSLL----TDRNVRMRLVESTRELATHIRRRE-------SIAAGPEGRVKSWYAGNR 1658
AGPTATGKSSIAL LC+ LGGE+VSCDSVQVYRD+ IGCNKP+ E+M+EVRHHLVD+A L ETFTAGDFV +A+ AIDDIL+RGRVPVVVGGTMMY+ WLVHGKPDAPKKD VAQAVA ELLPF++ GDWDGAL++LA + RAAS+++NDWYRLSRSLEVLR GE+ FTG R P+ KYDFRSFFI+GDRERLFRRID+RCEEM+ RGLL E AGLL RG+LDPASPAGRAIGYRQ I+FL QEA+LA+ G+ + T+ + DP++RFL+F +TF AKTRQY+ +Q+KWFRS KGRDF W+ WDLGGPI+E R G + G S R GDGC W+ VA SIAE ++L RE FDE+LGG+ Q +R EN+ RA DMKRY +ELSLL T+ RLV T ELA IR+ + +I P V+ W+AGNR
Sbjct: 75 AGPTATGKSSIALALCRDLGGEIVSCDSVQVYRDVFIGCNKPSPEEMKEVRHHLVDVAPLDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSRRAASMAKNDWYRLSRSLEVLRVPNDTGEEVFTGVRAPINKKYDFRSFFIIGDRERLFRRIDKRCEEMLMRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLHQEARLADDLRPAIAGASGSADANREATEVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSWQAWDLGGPIEEVPRRAGSGEKRGGGAKSHEAGSCARAGDGCGWRDVATSIAEQFELPRERFDEDLGGESQAMLRSENRQRAGDMKRYVSELSLLGGGGTENEALGRLVLETEELAARIRQAQHEQFRDGAITERPAMEVQGWHAGNR 543
BLAST of mRNA_H-elongata_contig18096.4830.1 vs. uniprot
Match: W7T6K3_9STRA (Trna dimethylallyltransferase 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6K3_9STRA) HSP 1 Score: 291 bits (744), Expect = 6.920e-87 Identity = 181/415 (43.61%), Postives = 229/415 (55.18%), Query Frame = 3
Query: 351 GPTATGKSSIALELCKQLG----GELVSCDSVQVYRDLSIGCNKPTEEDMREVRHHLVDI--AALSETFTAGDFVAQAQGAIDDILARGRVPVVVGGTMMYVQWLVHGKPDAPKKDHTVAQAVAKELLPFYEGGDWDGALQILATASETRAASLSRNDWYRLSRSLEVLR-----------------SAGGEKSFTGAR-EPLGPKYDFRSFFIVGDRERLFRRIDRRCEEMVKRGLLSEVAGLLDRGILDPASPAGRAIGYRQTIEFLQQEAKLAEGNEVRSPPKTDERSEHVGDPDSRFLQFLMTFTAKTRQYAADQIKWFRSPKGRDFCWRTWDLG--GPIKEGLCRGTRNGRDVLSVRTGDGCSWQRVAKSIAESYKLSREAFDEELGGDYQESVRVENQMRAKDMKRYAT 1517
GPTA GKS++AL +C+ L GE++S DSVQVYR L +G NKP+E + V HHL+D+ A E FTAGDFV +A+ AIDD+LARG +PVVVGGT MY QWLV G+PDAPK D + Q K L PF + DW G L +L + RAA L NDWYRL R+LEV SA SFTG R + L KYDFR FF++ RE L R IDRRC +MV+ GLL E A LL G L+P+SP GRAIGYRQTIE+L +E E E + +FL F TR+YA Q+ WFR+ +F W W+L GP+ + V S+AE ++S A E G Q+++RVEN M K M++Y +
Sbjct: 81 GPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATA-----------------LQEFLEDFATATRRYAKQQMVWFRAQA--EFMWLRWNLQDLGPVLDA------------------------VRASVAED-EVSHLARQEGKG---QKALRVENIMEGKRMRKYVS 448
BLAST of mRNA_H-elongata_contig18096.4830.1 vs. uniprot
Match: A0A835YP32_9STRA (IPP transferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP32_9STRA) HSP 1 Score: 282 bits (722), Expect = 4.500e-85 Identity = 162/377 (42.97%), Postives = 213/377 (56.50%), Query Frame = 3
Query: 384 LELCKQLGGELVSCDSVQVYRDLSIGCNKPTEEDMREVRHHLVDIAAL-SETFTAGDFVAQAQGAIDDILARGRVPVVVGGTMMYVQWLVHGKPDAPKKDHTVAQAVAKELLPFYEGGDWDGALQILATASETRAASLSRNDWYRLSRSLEV-LRSAGGEKSFTGARE-PLGPKYDFRSFFIVGDRERLFRRIDRRCEEMVKRGLLSEVAGLLDRGILDPASPAGRAIGYRQTIEFLQQEAKLAEGNEVRSPPKTDERSEHVGDPDSRFLQFLMTFTAKTRQYAADQIKWFRSPKGRDFCWRTWDLGGPIKEGLCRGTRNGRDVLSVRTGDGCSWQRVAKSIAESYKLSREAFDEELGGDYQESVRVENQMRAKDMK 1505
+E+CK +GGE+VS DSVQ+YR L +G NKP+ ED+ VRHHLV+I SE +T G ++ A AIDD+L RG+VP+VVGGTM+Y QWLV G+PDAP+ D Q V L PF GDWDG L++L + TRAA L++NDW RL RSL++ + G++ FTG R +YD RS+FIV DR RRI +RC+ M+ GLL EVA LL G+L S GRAIGYRQ E+L +R P H GD ++ +QF F TR+YA+DQ+KWFRS KG +F W D P S +A++IAE L + Q +R +N +AK M+
Sbjct: 1 MEVCKAVGGEIVSADSVQIYRRLDVGANKPSAEDLAAVRHHLVNILDPGSEEYTVGQWLRAAYAAIDDVLQRGKVPLVVGGTMLYTQWLVQGQPDAPEGDAATQQIVRTILAPFEATGDWDGGLELLRAVNATRAAQLNKNDWVRLGRSLQISMDMRQGDEVFTGERTGAASERYDVRSYFIVADRAEAARRITQRCQAMLSSGLLQEVAALLHAGLLPKESSPGRAIGYRQMREYL-----------LRPDP-------HAGDAEA-LVQFYSDFCTATRRYASDQLKWFRSSKGTEFVWCARDFADPN-----------------------SVPSIARAIAEDLSLDEHCHQAKRMDATQLQLREDNLAQAKQMR 335
BLAST of mRNA_H-elongata_contig18096.4830.1 vs. uniprot
Match: A0A4D9D1X7_9STRA (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA) HSP 1 Score: 290 bits (743), Expect = 2.730e-80 Identity = 185/433 (42.73%), Postives = 239/433 (55.20%), Query Frame = 3
Query: 300 PIWSSRVCQSYGHLNNA-GPTATGKSSIALELCKQLG----GELVSCDSVQVYRDLSIGCNKPTEEDMREVRHHLVDI--AALSETFTAGDFVAQAQGAIDDILARGRVPVVVGGTMMYVQWLVHGKPDAPKKDHTVAQAVAKELLPFYEGGDWDGALQILATASETRAASLSRNDWYRLSRSLEVLR-----------------SAGGEKSFTGAR-EPLGPKYDFRSFFIVGDRERLFRRIDRRCEEMVKRGLLSEVAGLLDRGILDPASPAGRAIGYRQTIEFLQQEAKLAEGNEVRSPPKTDERSEHVGDPDSRFLQFLMTFTAKTRQYAADQIKWFRSPKGRDFCWRTWDLG--GPIKEGLCRGTRNGRDVLSVRTGDGCSWQRVAKSIAESYKLSREAFDEELGGDYQESVRVENQMRAKDMKRYAT 1517
P+ +SRV +S + GPTA GKS++AL +C+ L GE++S DSVQVYR L +G NKP+E + V HHL+D+ A E FTAGDFV +A+ AIDD+LARG +PVVVGGT MY QWLV G+PDAPK D + Q K L PF + DW+G L +L + RAA L NDWYRL R+LEV SA SFTG R + L KYDFR FF++ RE L R IDRRC +MV+ GLL E A LL G L+P+SP GRAIGYRQTIE+L +E E E + +FL F TR+YA Q+ WFR+ +F W W+L GP+ + V S+AE ++S A E G+ Q+++R EN M K M++Y +
Sbjct: 2460 PMSASRVGRSRPKVVVVTGPTAVGKSNLALRICQDLAQGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWEGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREDLCRLIDRRCLQMVEGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATA-----------------LQEFLEDFATATRRYAKQQMVWFRAQA--EFIWLRWNLQDLGPVLDA------------------------VRASVAED-EVSHLARQE---GEGQKALREENIMEGKRMRKYVS 2845
BLAST of mRNA_H-elongata_contig18096.4830.1 vs. uniprot
Match: A0A8J5XJR5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJR5_DIALT) HSP 1 Score: 260 bits (664), Expect = 1.240e-75 Identity = 142/304 (46.71%), Postives = 179/304 (58.88%), Query Frame = 3
Query: 348 AGPTATGKSSIALELCKQLGGELVSCDSVQVYRDLSIGCNKPTEEDMREVRHHLVDIAALSETFTAGDFVAQAQGAIDDILARGRVPVVVGGTMMYVQWLVHGKPDAPKKDHTVAQAVAKELLPFYEGGDWDGALQILATASETRAASLSRNDWYRLSRSLEVLRSAG---GEKSFTGAREPLGPKYDFRSFFIVGDRERLFRRIDRRCEEMVKRGLLSEVAGLLDRGILDPASPAGRAIGYRQTIEFLQQEAKLAEGNEVRSPPKTDERSEHVGDPDSRFLQFLMTFTAKTRQYAADQIKWFR 1250
AGPT GKS +A++L +LGGE++S DSVQVYR L +G NKP+ +MR VRHHLV + SE + AG+F A AI D+ ARGR + VGGT MY+ WL++G P APK D +A VA L P E WD A+ +L + RAA+L RNDWYRL R+L + E RE L YD R+FF+V RE+L RRID RCE M+ GLL E + LL G L P S GRA+GYRQ +++L +TD R D D+ FL F FT +R YAA Q+KWFR
Sbjct: 46 AGPTGVGKSDVAMQLAARLGGEIISVDSVQVYRSLDVGSNKPSAAEMRRVRHHLVSVREPSEPYAAGNFYRDAADAIADVHARGRWAICVGGTSMYMHWLINGTPTAPKADPALAAQVAARLAPLREAHAWDDAIALLRASDPERAAALGRNDWYRLMRALTIAAQTSTPLAELRRDEGREQLHELYDLRAFFLVAPREQLARRIDARCERMLADGLLRETSALLASGELHPDSQPGRAVGYRQAVDYL---------------IRTDARD---ADGDA-FLAFARAFTQASRAYAAQQMKWFR 330
BLAST of mRNA_H-elongata_contig18096.4830.1 vs. uniprot
Match: A0A7S4F577_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F577_CHRCT) HSP 1 Score: 258 bits (660), Expect = 1.040e-74 Identity = 155/360 (43.06%), Postives = 200/360 (55.56%), Query Frame = 3
Query: 351 GPTATGKSSIALELCKQLGGELVSCDSVQVYRDLSIGCNKPTEEDMREVRHHLVDIAALSETFTAGDFVAQAQGAIDDILARGRVPVVVGGTMMYVQWLVHGKPDAPKKDHTVAQAVAKELLPFYEGGDWDGALQILATASETRAASLSRNDWYRLSRSLEVLRSAGGEKSFTGAREPLGPKY----------DFRSFFIVGDRERLFRRIDRRCEEMVKRGLLSEVAGLLDRGILDPASPAGRAIGYRQTIEFLQQEAKLAEGNEVRSPPKTDERSEHVGDPDSRFLQFLMTFTAKTRQYAADQIKWFRSPKGRDFCWRTWDLGGPIKEGLCRGTRNGRDVLS--VRTGDGCSWQRVAK 1394
GPTA GKS++ L LC+ L GEL+S DSVQVYR L IG NKP+ ++ V HHLVDI + +TAG F A A+ +L RG+ PV+VGGT MY++WLV+G+PDAP+ D +A+ L + + GDW+ AL LA RA L NDWYRL R+L V ++ T EP+ P+ D R FF+ RE+L RRID RCE+MV+ GL+ EVA LL L P+SPAGRAIGYRQTI++L +R P V D F+ F A +RQYAA Q KWFR K F W G + L + TR GR +R+ S +RV +
Sbjct: 46 GPTAVGKSALGLRLCEALPGELISVDSVQVYRGLQIGANKPSASELARVPHHLVDICEPRDDYTAGAFYRDALKAVKQVLERGKTPVLVGGTSMYLKWLVNGRPDAPRSDPAIAKRAHAMLQDYEKAGDWNSALSRLAEYDSHRAKELFANDWYRLHRALVVALQT--QEGSTNQEEPVEPEVLQLDELRASLDMRCFFLTFPREQLCRRIDSRCEQMVQAGLIEEVAELLATERLLPSSPAGRAIGYRQTIDYL-----------LREP--------FVPDDKGALQHFVEGFAAASRQYAAKQTKWFR--KEPLFRWVETTSIGTAETTLMQATRIGRAEFEEELRSTSQISLRRVTR 382
BLAST of mRNA_H-elongata_contig18096.4830.1 vs. uniprot
Match: A0A7S4BQD7_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BQD7_CHRCT) HSP 1 Score: 254 bits (648), Expect = 2.410e-74 Identity = 142/310 (45.81%), Postives = 181/310 (58.39%), Query Frame = 3
Query: 351 GPTATGKSSIALELCKQLGGELVSCDSVQVYRDLSIGCNKPTEEDMREVRHHLVDIAALSETFTAGDFVAQAQGAIDDILARGRVPVVVGGTMMYVQWLVHGKPDAPKKDHTVAQAVAKELLPFYEGGDWDGALQILATASETRAASLSRNDWYRLSRSLEVLRSAGGEKSFTGAREPLGPKY----------DFRSFFIVGDRERLFRRIDRRCEEMVKRGLLSEVAGLLDRGILDPASPAGRAIGYRQTIEFLQQEAKLAEGNEVRSPPKTDERSEHVGDPDSRFLQFLMTFTAKTRQYAADQIKWFR 1250
GPTA GKS++ L LC+ L GEL+S DSVQVYR L IG NKP+ ++ V HHLVDI + +TAG F A A+ +L RG+ PV+VGGT MY++WLV+G+PDAP+ D +A+ L + + GDW+ AL LA RA L NDWYRL R+L V ++ T EP+ P+ D R FF+ RE+L RRID RCE+MV+ GL+ EVA LL L P+SPAGRAIGYRQTI++L +R P V D F+ F A +RQYAA Q KWFR
Sbjct: 46 GPTAVGKSALGLRLCEALPGELISVDSVQVYRGLQIGANKPSASELARVPHHLVDICEPRDDYTAGAFYRDALKAVKQVLERGKTPVLVGGTSMYLKWLVNGRPDAPRSDPAIAKRAHAMLQDYEKAGDWNSALSRLAEYDSHRAKELFANDWYRLHRALVVALQT--QEGSTNQEEPVEPEVLQLDELRASLDMRCFFLTFPREQLCRRIDSRCEQMVQAGLIEEVAELLATERLLPSSPAGRAIGYRQTIDYL-----------LREP--------FVPDDKGALQHFVEGFAAASRQYAAKQTKWFR 334
BLAST of mRNA_H-elongata_contig18096.4830.1 vs. uniprot
Match: A0A7S3S7Q7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S7Q7_EMIHU) HSP 1 Score: 256 bits (653), Expect = 1.200e-73 Identity = 156/403 (38.71%), Postives = 204/403 (50.62%), Query Frame = 3
Query: 348 AGPTATGKSSIALELCKQLGGELVSCDSVQVYRDLSIGCNKPTEEDMREVRHHLVDIAALSETFTAGDFVAQAQGAIDDILARGRVPVVVGGTMMYVQWLVHGKPDAPKKDHTVAQAVAKELLPFYEGGDWDGALQILATASETRAASLSRNDWYRLSRSLEVLRSAGGEKSFT------GAREPLGPKYDFRSFFIVGDRERLFRRIDRRCEEMVKRGLLSEVAGLLDRGILDPASPAGRAIGYRQTIEFLQQEAKLAEGNEVRSPPKTDERSEHVGDPDSRFLQFLMTFTAKTRQYAADQIKWFRSPKGRDFCWRTWDLGGPIKEGLCRGTRNGRDVLSVRTGDGCSWQRVAKSIAESYKLSREAFDEELGGDYQESVRVENQMRAKDMKRYATELSLLTD 1538
AGPTA GKS++ + LC+ L GELVS DSVQVYR L IG NKP+ + HHL+D+A LS+ +TAG F A A A+D++L+RG+ PV+VGGT MY++WLVHG+P AP+ D VA A L P+ E DW+G L +L RAA LS NDWYRL R+L V + + + L D R FF+ R L RRID RC M++ GLL EV+ LL + L P+ PAGRAIGYRQ +E+L + +P D S F+ F A +R+YA Q KWFRS F W D P + A+ + S + R +++L Q +R K MKRY L D
Sbjct: 56 AGPTAVGKSALGMRLCEALPGELVSVDSVQVYRGLQIGANKPSAVERARTAHHLIDVAELSDDYTAGTFYADALTAVDEVLSRGKTPVLVGGTSMYLRWLVHGRPTAPRSDPAVAAAARDALQPYQEAADWEGGLALLRALDGPRAAQLSANDWYRLHRALVVAMQTRSQAAALPPPPDDSGLDALRASLDLRCFFLTAPRVPLCRRIDERCGAMLQAGLLREVSDLLLQRKLLPSHPAGRAIGYRQALEYLLRPCY--------APRDADALS-----------SFVHAFAAASRRYAQQQTKWFRSEPS--FEWVDVDWSAP--------------------------EVAAERVLASVRKPRLEHEDDLAAPRQAEMRAVKPDEGKAMKRYVERHDALED 411
BLAST of mRNA_H-elongata_contig18096.4830.1 vs. uniprot
Match: A0A0M0K692_9EUKA (tRNA dimethylallyltransferase 9 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K692_9EUKA) HSP 1 Score: 252 bits (643), Expect = 4.010e-73 Identity = 158/391 (40.41%), Postives = 208/391 (53.20%), Query Frame = 3
Query: 384 LELCKQLGGELVSCDSVQVYRDLSIGCNKPTEEDMREVRHHLVDIAALSETFTAGDFVAQAQGAIDDILARGRVPVVVGGTMMYVQWLVHGKPDAPKKDHTVAQAVAKELLPFYEGGDWDGALQILATASETRAASLSRNDWYRLSRSLEV-LRSAGGEKSFTGAREPLG-----PKYDFRSFFIVGDRERLFRRIDRRCEEMVKRGLLSEVAGLLDRGILDPASPAGRAIGYRQTIEFLQQEAKLAEGNEVRSPPKTDERSEHVGDPDSRFLQFLMTFTAKTRQYAADQIKWFRSPKGRDFCWRTWDLGGPIKEGLCRGTRNGRDVLSVRTGDGCSWQRVAKSIAESYKLSREAFDEELGGDYQESVRVENQMRAKDMKRYATELSLLTD 1538
+ LC+ L GEL+S DSVQVYR L IG NKP+ ++ + HHL+D+ E +TAG F A A A++++LARGRVPV+VGGT MY++WLV G+P+APK D +A+ V L P G W L+ LA RA LSRNDWYRLSR+L V L+++ + +P G D R FF+ RE L RRID RCE M++ GLL EV+ LL G L P+SPAGRAIGYRQ +++L +RSP +E V ++FL FTA +R+YAA Q+KWFR+ F W D P + V + + L R F++ L Q +R AK MK YA L L D
Sbjct: 1 MRLCELLPGELISVDSVQVYRGLQIGANKPSADERARIVHHLLDVRDPDEEYTAGAFYADALRAVEEVLARGRVPVLVGGTSMYLRWLVSGRPEAPKADPAIAERVRLLLAPLEASGSWAEGLEQLAALDGARAEMLSRNDWYRLSRALTVALQTSSTAAALPRLPDPEGLDALRSSLDLRCFFLAAPREALCRRIDARCEAMLEAGLLEEVSSLLASGRLLPSSPAGRAIGYRQVLDYL-----------LRSPWAP---AEGVA-----LVEFLEGFTAASRRYAAQQVKWFRNEP--QFEWVEADWAAP--------------------------ETVEQHVLGQLDLERARFEQLLQAPRQAELRALRPDEAKRMKTYAPRLRALDD 344
BLAST of mRNA_H-elongata_contig18096.4830.1 vs. uniprot
Match: A0A8J2S9H3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9H3_9STRA) HSP 1 Score: 249 bits (635), Expect = 4.660e-72 Identity = 144/307 (46.91%), Postives = 185/307 (60.26%), Query Frame = 3
Query: 348 AGPTATGKSSIALELCKQLGGELVSCDSVQVYRDLSIGCNKPTEEDMREVRHHLVDIAALSETFTAGDFVAQAQGAIDDILARGRVPVVVGGTMMYVQWLVHGKPDAPKKDHTVAQAVAKELLPFYEGGDWDGALQILATASET---RAASLSRNDWYRLSRSLEVL--RSAGGEKSFTGAREPLGPKYDFRSFFIV-GDRERLFRRIDRRCEEMVKRGLLSEVAGLLDRGILDPASPAGRAIGYRQTIEFLQQEAKLAEGNEVRSPPKTDERSEHVGDPDSRFLQFLMTFTAKTRQYAADQIKWFR 1250
AGPTA GKSS AL LC+ GELVS DSVQ+YR L +G NKP+ +++ VRHHLVD+A SE ++AG + A A A+ D++ RG++PVVVGGTMMY QWLV G PDAPK T A + + L P+ G DW+ AL +A SE R A LS+ND+YRLSR+LE+ R AGG S R LG +D R F+ DR L+ ID RC+ M+ RGLL E A L G L +S A RAIGYRQ +++L E R + D E ++ F F +R YAA+Q+KW+R
Sbjct: 14 AGPTAVGKSSAALRLCEARDGELVSADSVQLYRGLDVGSNKPSPAELQRVRHHLVDVADASEPWSAGAWCAAAAEAVGDVVKRGKLPVVVGGTMMYAQWLVRGAPDAPKASATAAASAQEFLAPY--GDDWESALSAVAARSEACAARVAKLSQNDFYRLSRALEIELDREAGGG-SVEARRPVLGSDFDVRCAFLAPADRTALYHAIDERCDIMLARGLLEETANLRAAGRLPSSSTAARAIGYRQALDYL----------EARVSGEADASLES-------YVAFCRQFRTASRNYAAEQLKWYR 300 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18096.4830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18096.4830.1 >prot_H-elongata_contig18096.4830.1 ID=prot_H-elongata_contig18096.4830.1|Name=mRNA_H-elongata_contig18096.4830.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=392bp MREVRHHLVDIAALSETFTAGDFVAQAQGAIDDILARGRVPVVVGGTMMYback to top mRNA from alignment at H-elongata_contig18096:3788..7063- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18096.4830.1 ID=mRNA_H-elongata_contig18096.4830.1|Name=mRNA_H-elongata_contig18096.4830.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3276bp|location=Sequence derived from alignment at H-elongata_contig18096:3788..7063- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18096:3788..7063- >mRNA_H-elongata_contig18096.4830.1 ID=mRNA_H-elongata_contig18096.4830.1|Name=mRNA_H-elongata_contig18096.4830.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2352bp|location=Sequence derived from alignment at H-elongata_contig18096:3788..7063- (Himanthalia elongata Himel1 dioecious)back to top |