prot_H-elongata_contig180716.4819.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig180716.4819.1
Unique Nameprot_H-elongata_contig180716.4819.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length137
Homology
BLAST of mRNA_H-elongata_contig180716.4819.1 vs. uniprot
Match: A0A8J5YCJ6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YCJ6_9ROSI)

HSP 1 Score: 60.1 bits (144), Expect = 7.960e-8
Identity = 45/140 (32.14%), Postives = 67/140 (47.86%), Query Frame = 0
Query:    1 CGVCKSLEHRTRDC--------KEHGAEKGAKLAKLTAPAVPEVGTIAAMVGAACGDRK--EEWELDSGATFHMSPVRVGMFAYKKASPGMTVEIADRNTLPVDGFGRIEMDVDQPGHTTKRAKMDDIAYVPEISRNLLS 130
            C  CK   H   +C        +E G +KG +        V E  +   ++ A+  D K  EEW LDSG TFHMSP R    AY+  S G+ + + +  +  + G G I++ +      T    + D+ YVPE+ RNL+S
Sbjct:  195 CNFCKKKGHIKSECYKLQNKIKREAGNQKGKQPENSGEADVVEDYSDGELLVASVNDSKVSEEWILDSGCTFHMSPNRDWFTAYETVSEGVVL-MGNNASCKIAGVGTIKVKMFDGVVRT----LSDVRYVPELKRNLIS 329          
BLAST of mRNA_H-elongata_contig180716.4819.1 vs. uniprot
Match: A0A8J5Y786_9ROSI (Integrase catalytic domain-containing protein n=2 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Y786_9ROSI)

HSP 1 Score: 58.9 bits (141), Expect = 2.020e-7
Identity = 44/140 (31.43%), Postives = 66/140 (47.14%), Query Frame = 0
Query:    1 CGVCKSLEHRTRDC--------KEHGAEKGAKLAKLTAPAVPEVGTIAAMVGAACGDRK--EEWELDSGATFHMSPVRVGMFAYKKASPGMTVEIADRNTLPVDGFGRIEMDVDQPGHTTKRAKMDDIAYVPEISRNLLS 130
            C  CK   H   +C        +E   +KG +L       V E  +   ++ A+  D K  EEW LDSG TFHMSP R     Y+  S G+ + + +  +  + G G I++ +      T    + D+ YVPE+ RNL+S
Sbjct:  238 CNFCKKKGHIKSECYKLQNKIKREAANQKGKQLENSGEANVVEDYSDGELLVASVNDSKVSEEWILDSGCTFHMSPNRDWFTTYETVSEGVVL-MGNNASCKIAGVGTIKVKMFDGVVRT----LSDVRYVPELKRNLIS 372          
BLAST of mRNA_H-elongata_contig180716.4819.1 vs. uniprot
Match: A0A6D2K301_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2K301_9BRAS)

HSP 1 Score: 58.5 bits (140), Expect = 2.690e-7
Identity = 47/140 (33.57%), Postives = 66/140 (47.14%), Query Frame = 0
Query:    1 CGVCKSLEHRTRDC---------KEHGAEKGAKLAKLTAPAVPEVGTIAAMVGAACGDR-KEEWELDSGATFHMSPVRVGMFAYKKASPGMTVEIADRNTLPVDGFGRIEMDVDQPGHTTKRAKMDDIAYVPEISRNLLS 130
            C +C    H  + C         K H  + G + A     A   VG +A  V    G+  KEEW LD+G +FHM+P R     +K+AS G  V++A+     V G G +      P  TT    + D+ Y+PEI RNL+S
Sbjct:  248 CWICGKEGHFKKQCYKWLEKNKEKSHSQDNG-ESALARDDAKDLVGLVACEVNLMRGNNEKEEWILDTGCSFHMTPRRDMFIDFKEASSGK-VKMANSTHSEVKGIGSVRFL--NPDGTT--FVLHDVRYMPEIGRNLIS 381          
BLAST of mRNA_H-elongata_contig180716.4819.1 vs. uniprot
Match: A0A8J6CKN5_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CKN5_9ROSI)

HSP 1 Score: 58.2 bits (139), Expect = 3.740e-7
Identity = 43/140 (30.71%), Postives = 65/140 (46.43%), Query Frame = 0
Query:    1 CGVCKSLEHRTRDC--------KEHGAEKGAKLAKLTAPAVPEVGTIAAMVGAACGDRK--EEWELDSGATFHMSPVRVGMFAYKKASPGMTVEIADRNTLPVDGFGRIEMDVDQPGHTTKRAKMDDIAYVPEISRNLLS 130
            C  CK   H   +C        +E   +KG +L       V E  +   ++ A   D K  EEW LDSG TFHMSP R     Y+  S G+ + + +  +  + G G I++ +      T    + D+ +VPE+ RNL+S
Sbjct:  194 CNFCKKKGHIKSECYKLQNKIKREAANQKGKQLENFGEADVVEDYSDGKLLVAFVNDSKVSEEWILDSGCTFHMSPNRDWFITYEMVSEGVVL-MGNNTSCKITGVGTIKVKMFDGIVRT----LSDVQHVPELKRNLIS 328          
BLAST of mRNA_H-elongata_contig180716.4819.1 vs. uniprot
Match: A0A8J5YN02_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YN02_9ROSI)

HSP 1 Score: 57.8 bits (138), Expect = 5.120e-7
Identity = 44/140 (31.43%), Postives = 65/140 (46.43%), Query Frame = 0
Query:    1 CGVCKSLEHRTRDC--------KEHGAEKGAKLAKLTAPAVPEVGTIAAMVGAACGDRK--EEWELDSGATFHMSPVRVGMFAYKKASPGMTVEIADRNTLPVDGFGRIEMDVDQPGHTTKRAKMDDIAYVPEISRNLLS 130
            C  CK   H   +C        +E   +KG +        V E  +   ++ A+  D K  EEW LDSG TFHMSP R     YK  S G+ + + +  +  + G G I++ +      T    + D+ YVPE+ RNL+S
Sbjct:  278 CNFCKKKGHIKSECYKLQNKIKREAANQKGKQPENSGEADVVEDYSDGELLVASVNDSKVSEEWILDSGCTFHMSPNRDWFTTYKTVSEGVVL-MGNNASCKIAGVGTIKVKMFDGVVRT----LSDVRYVPELKRNLIS 412          
BLAST of mRNA_H-elongata_contig180716.4819.1 vs. uniprot
Match: A0A6D2JA63_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JA63_9BRAS)

HSP 1 Score: 57.4 bits (137), Expect = 6.730e-7
Identity = 39/130 (30.00%), Postives = 65/130 (50.00%), Query Frame = 0
Query:    1 CGVCKSLEHRTRDCKEHGAEKGAKLAKLTAPAVPEVGTIAAMVGAACGDRKEEWELDSGATFHMSPVRVGMFAYKKASPGMTVEIADRNTLPVDGFGRIEMDVDQPGHTTKRAKMDDIAYVPEISRNLLS 130
            C +C    H  R+C   G  +  + +  T   V E      ++ A+  +RK+EW LDSG TFH+ P +  MF  K+   G  V +A+     V G G+I+  +  P  +     + ++ Y+P++ RNL+S
Sbjct:  257 CFICGKEGHWKRECPNRGKRQSEESSANTVAEVKEP----LVLTASQHNRKDEWILDSGCTFHICPNKELMFDIKEFDGGK-VSMANNTYSKVKGIGKIK--ITNPDGSV--VILTEVRYMPDMGRNLIS 377          
BLAST of mRNA_H-elongata_contig180716.4819.1 vs. uniprot
Match: A0A8J5Z6E7_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Z6E7_9ROSI)

HSP 1 Score: 57.4 bits (137), Expect = 6.870e-7
Identity = 43/140 (30.71%), Postives = 66/140 (47.14%), Query Frame = 0
Query:    1 CGVCKSLEHRTRDC--------KEHGAEKGAKLAKLTAPAVPEVGTIAAMVGAACGDRK--EEWELDSGATFHMSPVRVGMFAYKKASPGMTVEIADRNTLPVDGFGRIEMDVDQPGHTTKRAKMDDIAYVPEISRNLLS 130
            C  CK   H   +C        +E   +KG +    +   V E  +   ++ A+  D K  EEW LDSG TFHMSP R     Y+  S G+ + + +  +  + G G I++ +      T    + D+ YVPE+ RNL+S
Sbjct:  238 CNFCKKKGHIKSECYKLQNKIKREAANQKGKQPENSSEADVVEDYSDGELLVASVNDSKVSEEWILDSGCTFHMSPNRDWFTTYETVSEGVVL-MGNNASCKIAGVGTIKVKMFDGVVRT----LSDVRYVPELKRNLIS 372          
BLAST of mRNA_H-elongata_contig180716.4819.1 vs. uniprot
Match: A0A8J5Y9D9_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Y9D9_9ROSI)

HSP 1 Score: 57.4 bits (137), Expect = 6.950e-7
Identity = 44/140 (31.43%), Postives = 65/140 (46.43%), Query Frame = 0
Query:    1 CGVCKSLEHRTRDC--------KEHGAEKGAKLAKLTAPAVPEVGTIAAMVGAACGDRK--EEWELDSGATFHMSPVRVGMFAYKKASPGMTVEIADRNTLPVDGFGRIEMDVDQPGHTTKRAKMDDIAYVPEISRNLLS 130
            C  CK   H   +C        +E   +KG +        V E  +   +V A+  D K  EEW LDSG TFHMSP R     Y+  S G+ + + +  +  + G G I++ +      T    + D+ YVPE+ RNL+S
Sbjct:  238 CNFCKKKGHIKSECYKLQNKIKREAANQKGKQPENSGEADVVEDYSDGELVVASVNDSKVSEEWILDSGCTFHMSPNRDWFTTYETVSEGVVL-MGNNASCKIAGVGTIKVKMFDGVVRT----LSDVRYVPELKRNLIS 372          
BLAST of mRNA_H-elongata_contig180716.4819.1 vs. uniprot
Match: A0A8J5Y7X3_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Y7X3_9ROSI)

HSP 1 Score: 57.4 bits (137), Expect = 6.970e-7
Identity = 44/140 (31.43%), Postives = 65/140 (46.43%), Query Frame = 0
Query:    1 CGVCKSLEHRTRDC--------KEHGAEKGAKLAKLTAPAVPEVGTIAAMVGAACGDRK--EEWELDSGATFHMSPVRVGMFAYKKASPGMTVEIADRNTLPVDGFGRIEMDVDQPGHTTKRAKMDDIAYVPEISRNLLS 130
            C  CK   H   +C        +E   +KG +        V E  +   +V A+  D K  EEW LDSG TFHMSP R     Y+  S G+ + + +  +  + G G I++ +      T    + D+ YVPE+ RNL+S
Sbjct:  238 CNFCKKKGHIKSECYKLQNKIKREAANQKGKQPENSGEADVVEDYSDGELVVASVNDSKVSEEWILDSGCTFHMSPNRDWFTTYETVSEGVVL-MGNNASCKIAGVGTIKVKMFDGVVRT----LSDVRYVPELKRNLIS 372          
BLAST of mRNA_H-elongata_contig180716.4819.1 vs. uniprot
Match: A0A8J5YXI6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YXI6_9ROSI)

HSP 1 Score: 57.4 bits (137), Expect = 6.970e-7
Identity = 44/140 (31.43%), Postives = 65/140 (46.43%), Query Frame = 0
Query:    1 CGVCKSLEHRTRDC--------KEHGAEKGAKLAKLTAPAVPEVGTIAAMVGAACGDRK--EEWELDSGATFHMSPVRVGMFAYKKASPGMTVEIADRNTLPVDGFGRIEMDVDQPGHTTKRAKMDDIAYVPEISRNLLS 130
            C  CK   H   +C        +E   +KG +        V E  +   +V A+  D K  EEW LDSG TFHMSP R     Y+  S G+ + + +  +  + G G I++ +      T    + D+ YVPE+ RNL+S
Sbjct:  238 CNFCKKKGHIKSECYKLQNKIKREAANQKGKQPENSGEADVVEDYSDGELVVASVNDSKVSEEWILDSGCTFHMSPNRDWFTTYETVSEGVVL-MGNNASCKIAGVGTIKVKMFDGVVRT----LSDVRYVPELKRNLIS 372          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig180716.4819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J5YCJ6_9ROSI7.960e-832.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5Y786_9ROSI2.020e-731.43Integrase catalytic domain-containing protein n=2 ... [more]
A0A6D2K301_9BRAS2.690e-733.57Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A8J6CKN5_9ROSI3.740e-730.71Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A8J5YN02_9ROSI5.120e-731.43Integrase catalytic domain-containing protein n=1 ... [more]
A0A6D2JA63_9BRAS6.730e-730.00Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A8J5Z6E7_9ROSI6.870e-730.71Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5Y9D9_9ROSI6.950e-731.43Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5Y7X3_9ROSI6.970e-731.43Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5YXI6_9ROSI6.970e-731.43Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig180716contigH-elongata_contig180716:213..623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig180716.4819.1mRNA_H-elongata_contig180716.4819.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig180716 213..623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig180716.4819.1 ID=prot_H-elongata_contig180716.4819.1|Name=mRNA_H-elongata_contig180716.4819.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
CGVCKSLEHRTRDCKEHGAEKGAKLAKLTAPAVPEVGTIAAMVGAACGDR
KEEWELDSGATFHMSPVRVGMFAYKKASPGMTVEIADRNTLPVDGFGRIE
MDVDQPGHTTKRAKMDDIAYVPEISRNLLSTLKAVEQ
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