prot_H-elongata_contig18045.4804.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18045.4804.1
Unique Nameprot_H-elongata_contig18045.4804.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1246
Homology
BLAST of mRNA_H-elongata_contig18045.4804.1 vs. uniprot
Match: D7FHM1_ECTSI (TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM1_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 4.690e-90
Identity = 270/591 (45.69%), Postives = 322/591 (54.48%), Query Frame = 0
Query:  744 RTEKSLATERKRFADYKRMTEEKLKLLRREATRVSEVEDELATKTLRLKQKNAEARALATDRTVVKDLRESLSSKDNALNELRQELNSLRQISTTTASKQRSPRLQKXXXXXXXXXXXXXXXXXXPSNFNASPT-----------------LDLTRTFSLSSMGSLGDVG--SGLDAIV--------------------------------------EEAEARESSSEEGDAGVDDSAAPSP----SGSDAGGEGVSPGAGVAELPASPPRLKLDLVHFDDDLDEDDEDQKSNNHDVFAGKFSAAD----KEASLVGRWNSVVGSRAT-ARPAKASVSLSPTRRLGTKSRASEAPG---------------SRSLSPLPCR---PSRASWCIGGLSQSHAQLKM---PAANCLSSTLTSTRKLDPVDHGLGRQGNAVVLELGAWRVRVGVVANAEGGGLGVKSFFDDFPCCMARPMREGADLDELVNGASSLAAPMYAKFRETGVFVGGDAWYCCLDHPSIALRSKLQLSCPMQR-GRKLNREDTNMLMDHAFRLLNQDPACAPTLLTYKPTATADEVLDMVSVLLEAHQV 1246
            R E SLA ER++F+  KR +E K+KLLR  A R  ++ED+L+ K+LRLKQK AEAR LATD  VV+ LRESL+ KDNALNELRQEL +LR  S    +         XXXXXXX                 S +                  D+TRTFSLSS   +   G  SGL AIV                                      +E +  ES SE G + VD           +G  +  +G   GAG A L  SP   +LD            ED+ S +  V A   +AA      E   VG      G R+T AR    S+S  P  R    +RAS APG               ++SLSPLP R    SRASW  G     HA  ++   P  +CLS  +    +L P DHGLGR+GN VVLELGAWRVR GVV  +   G    S+FDDFPCC+ARP REGADLDELVNGASSLAAPMY+KFR+TGVFVGGDAWYCCLDHPSIALRSKL+LSCPM+R  +  +REDT  L DHA+ LL QD + +PTLLTYKPTAT DEVL + SVLLE H+V
Sbjct:  838 RAEASLAAERQKFSAAKRASEAKIKLLRAAAGRADDLEDQLSAKSLRLKQKEAEARVLATDGKVVRGLRESLTCKDNALNELRQELGNLRVASAAAEAXXXXXXXXXXXXXXXXLYGNVGSSERRSIGMPGSASRXXXXXXXXXXXXXXXXXDMTRTFSLSSEEEIDSSGESSGLGAIVXXXXXXXXXXXXXXXXXXXXXGEEGGGVAGYGGKMSVVQEGD-EESESEGGRSSVDGEQXXXXXXVXNGELSADDGKDAGAGAARLSLSPLAPRLDYS----------EDRPSADPPVSATYAAAAAMFDRNEDQKVGVHR---GGRSTSARRLSMSLSPPPGARRSRGARASVAPGXXXXXXXXXXXXXGCAKSLSPLPLRGGKKSRASWSPGAGLLPHAAARLAQSPPLSCLSPMV----RLAPADHGLGREGNTVVLELGAWRVRAGVVTPSGEEGKS-SSYFDDFPCCVARPSREGADLDELVNGASSLAAPMYSKFRDTGVFVGGDAWYCCLDHPSIALRSKLRLSCPMRRRDQPPSREDTERLADHAYGLLKQDSSLSPTLLTYKPTATVDEVLALASVLLEVHRV 1409          
BLAST of mRNA_H-elongata_contig18045.4804.1 vs. uniprot
Match: A0A6H5JDL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL2_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.840e-42
Identity = 111/218 (50.92%), Postives = 128/218 (58.72%), Query Frame = 0
Query: 1035 RSLSPLPCR---PSRASWCIGGLSQSHAQLKM---PAANCLSSTLTSTRKLDPVDHGLGRQGNAVVLELGAWRVRVGVVANAEGGGLGVKSFFDDFPCCMARPMREGADLDELVNGASSLAAPMYAKFRETGVFVGGDAWYCCLDHPSIALRSKLQLSCPMQRGRKLNREDTNMLMDHAFRLLNQDPACAPTLLTYKPTATADEVLDMVSVLLEAHQV 1246
            +SLSPLP R    SRASW  G     HA  ++   P  +CLS  +    +L P DHGLGR+GN VVLELGAWRVR GVV  +   G    S+FDDFPCC+ARP +EGADL ELVNGASSLAAPMY+KFRE                                       EDT  L DHA+ LL QD + +PTLLTYKPTAT DEVL + SVLLE H+V
Sbjct:  611 KSLSPLPLRGGKKSRASWSPGAGLLPHAAARLAQSPPLSCLSPMV----RLAPADHGLGREGNTVVLELGAWRVRAGVVTPSGEEGKS-SSYFDDFPCCVARPSKEGADLGELVNGASSLAAPMYSKFRE---------------------------------------EDTVRLADHAYGLLKQDSSLSPTLLTYKPTATVDEVLALASVLLEVHRV 784          
BLAST of mRNA_H-elongata_contig18045.4804.1 vs. uniprot
Match: W7TNT9_9STRA (Actin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNT9_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.160e-21
Identity = 61/149 (40.94%), Postives = 81/149 (54.36%), Query Frame = 0
Query: 1095 LELGAWRVRVGVVANAEGGGLGVKSFFD-DFPCCMARPMREGADLDELVNGASSLAAPMYAKFRETGVFVGGDAWYCCLDHPSIALRSKLQLSCPMQRGRKLNREDTNMLMDHAFRLLNQDPACAPTLLTYKPTATADEVLDMVSVLLE 1242
            +E+G WR+R G V          KSF   +FPC +ARP +  ADL  +V  AS  A  MY +FRE GVF+G DAWYC  DHP   LR  L+L  P  R R +   D  +L+ + F          P ++TYKPT+T  E  ++V +L E
Sbjct:  893 VEIGTWRIRAGWVEVGTS-----KSFQTVEFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLIRPADLKLLLKYVFEKCEVCLTKTPLVVTYKPTSTLKEREEVVEMLFE 1036          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18045.4804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHM1_ECTSI4.690e-9045.69TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus sil... [more]
A0A6H5JDL2_9PHAE1.840e-4250.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TNT9_9STRA1.160e-2140.94Actin-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 169..221
NoneNo IPR availableCOILSCoilCoilcoord: 808..835
NoneNo IPR availableCOILSCoilCoilcoord: 7..55
NoneNo IPR availableCOILSCoilCoilcoord: 693..727
NoneNo IPR availableCOILSCoilCoilcoord: 113..140
NoneNo IPR availableCOILSCoilCoilcoord: 416..471
NoneNo IPR availableCOILSCoilCoilcoord: 777..797
NoneNo IPR availableCOILSCoilCoilcoord: 483..611
NoneNo IPR availableCOILSCoilCoilcoord: 615..667
NoneNo IPR availableCOILSCoilCoilcoord: 246..280
NoneNo IPR availableGENE3D3.30.420.40coord: 1087..1246
e-value: 1.4E-6
score: 29.9
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 1089..1245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18045contigH-elongata_contig18045:2373..7205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18045.4804.1mRNA_H-elongata_contig18045.4804.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18045 2373..7205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18045.4804.1 ID=prot_H-elongata_contig18045.4804.1|Name=mRNA_H-elongata_contig18045.4804.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1246bp
SDTANIAAKAEASLAQLNNDFRSFRESISQDRRALQEAKEELAEIHERFV
VFQRDAEASAARKDAEFSAASAETECTLEQAREELRVFRLKTGGDVDVLR
EYEEALSKEREYVTSFKREAEDARQKLEEERRARESAKADLVDACKALEM
TKDSLSLNHERCVKSTRDNEAARDMLKESQAAKERIEADLAKAHEEIRIS
NEKNENRAEELRKSLEALAAQRERSATLLQEVDAALKLQEATQAARDRAE
ADLAETRDGLQESREALAAERERSEALSQKSDAMDEHAKTARAALEESHM
LRQALASERVLSAALGLEADATRKLQEDAQITKDSAITEITEIRNVLRET
RESLAVERQQSAASKRENEEVPAKGHLEEQLLESQRALVSERERYEAFNP
KDDDRDKHLEATREALDAERKRSVASMQEKEEAQKQKGDTQAAKGRVEEQ
LLESQQALASERERYEVLSQQADAWDKHLKATREALNAERKRSVASMQEK
EEAQKQKGHAQSAKDRVEENLLESQRALASERERYEALSQQADAWDKNLE
ATREALAAERERSAALVQEKEEAQKQEVEVQAAKRRAEADLAQTRDDLQE
AFDALAAERERSAASKQEEEEARKHRENAQSAKDRAETDLSEIGRDLQES
RDALSALREHAQATRDRKEADMVKIRDDLFKSQGALATERDCREAFKQKS
DALNNDLERARAAQEDIQAALEKGRKELGVLRGELKGVREAQTRTEKSLA
TERKRFADYKRMTEEKLKLLRREATRVSEVEDELATKTLRLKQKNAEARA
LATDRTVVKDLRESLSSKDNALNELRQELNSLRQISTTTASKQRSPRLQK
QQQQQDYRATASAASAASPSNFNASPTLDLTRTFSLSSMGSLGDVGSGLD
AIVEEAEARESSSEEGDAGVDDSAAPSPSGSDAGGEGVSPGAGVAELPAS
PPRLKLDLVHFDDDLDEDDEDQKSNNHDVFAGKFSAADKEASLVGRWNSV
VGSRATARPAKASVSLSPTRRLGTKSRASEAPGSRSLSPLPCRPSRASWC
IGGLSQSHAQLKMPAANCLSSTLTSTRKLDPVDHGLGRQGNAVVLELGAW
RVRVGVVANAEGGGLGVKSFFDDFPCCMARPMREGADLDELVNGASSLAA
PMYAKFRETGVFVGGDAWYCCLDHPSIALRSKLQLSCPMQRGRKLNREDT
NMLMDHAFRLLNQDPACAPTLLTYKPTATADEVLDMVSVLLEAHQV
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