mRNA_H-elongata_contig18035.4799.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18035.4799.1 vs. uniprot
Match: D7FW34_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW34_ECTSI) HSP 1 Score: 246 bits (627), Expect = 2.700e-78 Identity = 114/127 (89.76%), Postives = 123/127 (96.85%), Query Frame = 3
Query: 3 SGYYKGTKFHRNIKGFMVQGGDPLGTGKGGESIWGGTFPDEFHPENKNDKRGMVSMASKGPNTNKSQFFITYSRQPHLNNVYTVFGKVIDGLDVLDVMEKAPVGKKERPLTDILINDLTIHANPIAE 383
SGYY GTKFHRNIKGFMVQGGDPLGTGKGGESIWGG FPDEFHP+NK+D+RGMVSMASKGPNTNKSQFFITY+RQPHLNNVYTVFGKVIDGLDVLDV+EKAPVGKKERPLT+I+I +TIHANP+AE
Sbjct: 34 SGYYDGTKFHRNIKGFMVQGGDPLGTGKGGESIWGGPFPDEFHPDNKHDRRGMVSMASKGPNTNKSQFFITYTRQPHLNNVYTVFGKVIDGLDVLDVIEKAPVGKKERPLTEIIIKHVTIHANPVAE 160
BLAST of mRNA_H-elongata_contig18035.4799.1 vs. uniprot
Match: A0A8K1CJL0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJL0_PYTOL) HSP 1 Score: 208 bits (530), Expect = 1.200e-63 Identity = 95/126 (75.40%), Postives = 110/126 (87.30%), Query Frame = 3
Query: 6 GYYKGTKFHRNIKGFMVQGGDPLGTGKGGESIWGGTFPDEFHPENKNDKRGMVSMASKGPNTNKSQFFITYSRQPHLNNVYTVFGKVIDGLDVLDVMEKAPVGKKERPLTDILINDLTIHANPIAE 383
G Y GTKFHRNI+GFMVQGGDP GTGKGGESIWGG F DEFHP+N+++ RG+VSMA+ GPNTN+ QFFITY++QPHLNNVYT+FGKVIDG+DVLD MEK+ V K RPL DI+I +TIHANPIAE
Sbjct: 35 GSYDGTKFHRNIRGFMVQGGDPTGTGKGGESIWGGKFDDEFHPQNRHNCRGIVSMANNGPNTNRQQFFITYAKQPHLNNVYTIFGKVIDGMDVLDAMEKSQVDAKNRPLKDIVIESVTIHANPIAE 160
BLAST of mRNA_H-elongata_contig18035.4799.1 vs. uniprot
Match: K3X4J3_GLOUD (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X4J3_GLOUD) HSP 1 Score: 206 bits (524), Expect = 1.060e-62 Identity = 94/126 (74.60%), Postives = 108/126 (85.71%), Query Frame = 3
Query: 6 GYYKGTKFHRNIKGFMVQGGDPLGTGKGGESIWGGTFPDEFHPENKNDKRGMVSMASKGPNTNKSQFFITYSRQPHLNNVYTVFGKVIDGLDVLDVMEKAPVGKKERPLTDILINDLTIHANPIAE 383
G Y GT+FHRN+KGFMVQGGDP GTGKGGESIWGG F DEFHP+N+++ RG+VSMA+ GPNTNK QFFITY++QPHLNNVYTVFGKVIDG DVLD +EK PV K RP+ DI I +TIHANP+AE
Sbjct: 38 GAYDGTRFHRNMKGFMVQGGDPTGTGKGGESIWGGKFDDEFHPQNRHNCRGIVSMANNGPNTNKQQFFITYAKQPHLNNVYTVFGKVIDGFDVLDTLEKVPVDTKYRPVKDITIQSVTIHANPLAE 163
BLAST of mRNA_H-elongata_contig18035.4799.1 vs. uniprot
Match: D0MRP3_PHYIT (Peptidyl-prolyl cis-trans isomerase n=21 Tax=Peronosporaceae TaxID=4777 RepID=D0MRP3_PHYIT) HSP 1 Score: 206 bits (523), Expect = 1.350e-62 Identity = 93/127 (73.23%), Postives = 108/127 (85.04%), Query Frame = 3
Query: 3 SGYYKGTKFHRNIKGFMVQGGDPLGTGKGGESIWGGTFPDEFHPENKNDKRGMVSMASKGPNTNKSQFFITYSRQPHLNNVYTVFGKVIDGLDVLDVMEKAPVGKKERPLTDILINDLTIHANPIAE 383
SG Y GTKFHRN+KGFMVQGGDP GTGKGG+SIWGGT DEFHP+N+++ RG+VSMA+ GPNTNK QFFITY +QPHLNNVYTVFGK+IDG+D LD +EK PV K RPL +I I +TIHANPIA+
Sbjct: 34 SGAYDGTKFHRNMKGFMVQGGDPTGTGKGGQSIWGGTIDDEFHPQNRHNCRGIVSMANSGPNTNKQQFFITYGKQPHLNNVYTVFGKIIDGMDTLDAIEKTPVDAKNRPLKEIAIKSVTIHANPIAD 160
BLAST of mRNA_H-elongata_contig18035.4799.1 vs. uniprot
Match: A0A067DAD1_SAPPC (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067DAD1_SAPPC) HSP 1 Score: 204 bits (520), Expect = 3.710e-62 Identity = 93/127 (73.23%), Postives = 108/127 (85.04%), Query Frame = 3
Query: 3 SGYYKGTKFHRNIKGFMVQGGDPLGTGKGGESIWGGTFPDEFHPENKNDKRGMVSMASKGPNTNKSQFFITYSRQPHLNNVYTVFGKVIDGLDVLDVMEKAPVGKKERPLTDILINDLTIHANPIAE 383
S Y T FHRN+KGFM+QGGDP GTGKGGESIWGG F DEFHP+N+++ RG+VSMA+ GPNTNK QFFITY++QPHLNNVYTVFGKVIDG DVLD MEK PV K RPL +IL++ +TIHANP+AE
Sbjct: 34 SNAYDKTTFHRNMKGFMIQGGDPTGTGKGGESIWGGKFNDEFHPQNRHNARGIVSMANSGPNTNKQQFFITYAKQPHLNNVYTVFGKVIDGFDVLDAMEKTPVDAKSRPLKEILLHSITIHANPLAE 160
BLAST of mRNA_H-elongata_contig18035.4799.1 vs. uniprot
Match: A0A024U9Y3_9STRA (Peptidyl-prolyl cis-trans isomerase n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024U9Y3_9STRA) HSP 1 Score: 201 bits (511), Expect = 8.970e-61 Identity = 92/128 (71.88%), Postives = 108/128 (84.38%), Query Frame = 3
Query: 3 SGYYKGTKFHRNIKGFMVQGGDPLGTGKGGESIWGGTFPDEFHPENKNDKRGMVSMASKGPNTNKSQFFITYSRQPHLNNVYTVFGKVIDGLDVLDVMEKAPVGKKERPLTDILINDLTIHANPIAEN 386
S Y T FHRN+KGFM+QGGDP GTGKGGESIWGG DEFHP+N+++ RG+VSMA+ G NTNK QFFITY++QPHLNNVYTVFGKVIDG DVLD MEKA V K RPL DI++N++TIHANPIA++
Sbjct: 34 SNSYDNTVFHRNMKGFMIQGGDPTGTGKGGESIWGGAIDDEFHPQNRHNVRGIVSMANSGANTNKQQFFITYAKQPHLNNVYTVFGKVIDGFDVLDAMEKAQVDSKHRPLKDIVLNNVTIHANPIADD 161
BLAST of mRNA_H-elongata_contig18035.4799.1 vs. uniprot
Match: A0A485L1A0_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485L1A0_9STRA) HSP 1 Score: 199 bits (507), Expect = 3.360e-60 Identity = 90/124 (72.58%), Postives = 106/124 (85.48%), Query Frame = 3
Query: 12 YKGTKFHRNIKGFMVQGGDPLGTGKGGESIWGGTFPDEFHPENKNDKRGMVSMASKGPNTNKSQFFITYSRQPHLNNVYTVFGKVIDGLDVLDVMEKAPVGKKERPLTDILINDLTIHANPIAE 383
Y T FHRN+KGFM+QGGDP GTGKGGESIWGG DEFHP+N+++ RG+VSMA+ GPNTNK QFFITY++QPHLNNVYTVF KVIDG DVLD MEKAPV K RP+ DI+++ +TIHANP+AE
Sbjct: 37 YDNTLFHRNMKGFMIQGGDPTGTGKGGESIWGGAMNDEFHPQNRHNTRGIVSMANSGPNTNKQQFFITYAKQPHLNNVYTVFAKVIDGFDVLDQMEKAPVDAKHRPVKDIVLHKVTIHANPLAE 160
BLAST of mRNA_H-elongata_contig18035.4799.1 vs. uniprot
Match: H3G7R5_PHYRM (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7R5_PHYRM) HSP 1 Score: 199 bits (505), Expect = 7.410e-60 Identity = 93/130 (71.54%), Postives = 109/130 (83.85%), Query Frame = 3
Query: 3 SGYYKGTKFHR---NIKGFMVQGGDPLGTGKGGESIWGGTFPDEFHPENKNDKRGMVSMASKGPNTNKSQFFITYSRQPHLNNVYTVFGKVIDGLDVLDVMEKAPVGKKERPLTDILINDLTIHANPIAE 383
SG Y GTKFHR NI GFMVQGGDP GTGKGG+SIWGG F DEFHP+N+++ RG+VSMA+ GPNTNK QFFITY++QPHLNNVYT+FGKVIDG+D LD MEK+PV K RPL +I + +TIHANPIA+
Sbjct: 34 SGAYDGTKFHRQVANILGFMVQGGDPTGTGKGGQSIWGGAFGDEFHPQNRHNCRGIVSMANSGPNTNKQQFFITYAKQPHLNNVYTMFGKVIDGMDTLDAMEKSPVDAKNRPLKEIELKSVTIHANPIAD 163
BLAST of mRNA_H-elongata_contig18035.4799.1 vs. uniprot
Match: A0A6U3ZYE6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZYE6_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.940e-59 Identity = 93/135 (68.89%), Postives = 112/135 (82.96%), Query Frame = 3
Query: 3 SGYYKGTKFHRNIKGFMVQGGDPLGTGKGGESIWGGTFPDEFHPENKNDKRGMVSMASKGPNTNKSQFFITYSRQPHLNNVYTVFGKVIDGLDVLDVMEKAPV--GKKE----RPLTDILINDLTIHANPIAENG 389
SGYY GT FHRN++GFM+QGGDP GTGKGGESIWGGTF DEFH N +D+RG+VSMA+KGPNTNKSQFFITY RQPHLNNVYTVFG+++DG DVL+ ME+ PV G K+ RP+T ++ +TIHANP+A+ G
Sbjct: 34 SGYYDGTVFHRNMRGFMIQGGDPKGTGKGGESIWGGTFEDEFHSTNTHDRRGVVSMANKGPNTNKSQFFITYERQPHLNNVYTVFGRILDGWDVLEQMERLPVVGGTKKSVAHRPITPPVVEKVTIHANPLADEG 168
BLAST of mRNA_H-elongata_contig18035.4799.1 vs. uniprot
Match: A0A6A4C5Z0_9STRA (PPIase cyclophilin-type domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4C5Z0_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.860e-58 Identity = 93/127 (73.23%), Postives = 108/127 (85.04%), Query Frame = 3
Query: 3 SGYYKGTKFHRNIKGFMVQGGDPLGTGKGGESIWGGTFPDEFHPENKNDKRGMVSMASKGPNTNKSQFFITYSRQPHLNNVYTVFGKVIDGLDVLDVMEKAPVGKKERPLTDILINDLTIHANPIAE 383
SG Y GTKFHRN+KGFMVQGGDP GTGKGG+SIWGG DEFHP+N+++ RG+VSMA+ GPNTNK QFFI Y++QPHLNNVYTVFGKVIDG+D LD MEK PV K RPL +I+I +TIHANPIA+
Sbjct: 345 SGSYDGTKFHRNMKGFMVQGGDPTGTGKGGQSIWGGAIDDEFHPQNRHNCRGIVSMANSGPNTNKQQFFIAYAKQPHLNNVYTVFGKVIDGMDTLDAMEKTPVDAKNRPLKEIVIKSVTIHANPIAD 471 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18035.4799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18035.4799.1 >prot_H-elongata_contig18035.4799.1 ID=prot_H-elongata_contig18035.4799.1|Name=mRNA_H-elongata_contig18035.4799.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=116bp MVQGGDPLGTGKGGESIWGGTFPDEFHPENKNDKRGMVSMASKGPNTNKSback to top mRNA from alignment at H-elongata_contig18035:802..2322+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18035.4799.1 ID=mRNA_H-elongata_contig18035.4799.1|Name=mRNA_H-elongata_contig18035.4799.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1521bp|location=Sequence derived from alignment at H-elongata_contig18035:802..2322+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18035:802..2322+ >mRNA_H-elongata_contig18035.4799.1 ID=mRNA_H-elongata_contig18035.4799.1|Name=mRNA_H-elongata_contig18035.4799.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=696bp|location=Sequence derived from alignment at H-elongata_contig18035:802..2322+ (Himanthalia elongata Himel1 dioecious)back to top |