prot_H-elongata_contig18011.4789.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18011.4789.1
Unique Nameprot_H-elongata_contig18011.4789.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
BLAST of mRNA_H-elongata_contig18011.4789.1 vs. uniprot
Match: D7G0J3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J3_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 1.030e-35
Identity = 67/87 (77.01%), Postives = 73/87 (83.91%), Query Frame = 0
Query:    1 MLVASDKDGVRCQLLKDFTSSVTSEMFAEFDLLDATTSMHGVAQCFDLK----RLCTRNIFKRGVKILAGSLPLNCDSFPQLFRWYD 83
            +LVASD DGVR +LL +FTSSVTSE FAEFDLLDATTS HGV QCFDLK    RL TR+I KRGVKI AG+LPL CDSFPQLF+WYD
Sbjct:  122 VLVASDGDGVRRRLLYNFTSSVTSEKFAEFDLLDATTSEHGVVQCFDLKHNLKRLRTRDISKRGVKIPAGALPLYCDSFPQLFQWYD 208          
BLAST of mRNA_H-elongata_contig18011.4789.1 vs. uniprot
Match: D7G6P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P9_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 5.850e-34
Identity = 66/87 (75.86%), Postives = 72/87 (82.76%), Query Frame = 0
Query:    1 MLVASDKDGVRCQLLKDFTSSVTSEMFAEFDLLDATTSMHGVAQCFDLK----RLCTRNIFKRGVKILAGSLPLNCDSFPQLFRWYD 83
            +LVASD DGVR +LL +FTSSVTSE FAEFDLLDA TS +GV QCFDLK    RL TR+I KRGVKI A +LPLNCDSFPQLFRWYD
Sbjct:  217 VLVASDGDGVRRRLLYNFTSSVTSEKFAEFDLLDAMTSEYGVVQCFDLKHNLKRLRTRDISKRGVKISASALPLNCDSFPQLFRWYD 303          
BLAST of mRNA_H-elongata_contig18011.4789.1 vs. uniprot
Match: D7FQM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM1_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 9.880e-16
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    1 MLVASDKDGVRCQLLKDFTSSVTSEMFAEFDLLDATTSMHGVAQCFDLK----RLCTRNIFKRGVKILAGSLPLNCDSFPQLFRWYD 83
            +LV SD D VR ++L D TS  TS++   F L+D TTS+ G+ QCFDLK    R  T++I K+GV++ +G L LN D++P+LFR +D
Sbjct:  186 VLVCSDGDAVRRKVLHDLTSGGTSDVLNVFKLMDKTTSVEGLMQCFDLKHCAKRYRTKDISKKGVRV-SGGLALNRDTYPELFRVHD 271          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18011.4789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0J3_ECTSI1.030e-3577.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G6P9_ECTSI5.850e-3475.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQM1_ECTSI9.880e-1648.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18011contigH-elongata_contig18011:6610..6861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18011.4789.1mRNA_H-elongata_contig18011.4789.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18011 6565..7314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18011.4789.1 ID=prot_H-elongata_contig18011.4789.1|Name=mRNA_H-elongata_contig18011.4789.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
MLVASDKDGVRCQLLKDFTSSVTSEMFAEFDLLDATTSMHGVAQCFDLKR
LCTRNIFKRGVKILAGSLPLNCDSFPQLFRWYD*
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