prot_H-elongata_contig17997.4785.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17997.4785.1
Unique Nameprot_H-elongata_contig17997.4785.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
BLAST of mRNA_H-elongata_contig17997.4785.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 4.910e-20
Identity = 47/89 (52.81%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    2 CIDPGPLNDTACEEVQPP---PCPVAAKRNWVVETTTQVGALAETINCSDGSFEVEWRGSIIVDTEIVVVDGTFLNITGGGNFSAVLDG 87
            C+DP   +   CEE  PP   PC   A++ WVVE + Q  ALA  +NCS GSF+VEWRGS+ +D  I +V GT LN+TGGG  SAV+DG
Sbjct:  104 CLDPSATDLYDCEE--PPAATPCSAEAQQAWVVEDSAQAQALAANVNCSGGSFQVEWRGSVSLDAPIFIVHGTDLNVTGGGEASAVIDG 190          
BLAST of mRNA_H-elongata_contig17997.4785.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.130e-18
Identity = 44/87 (50.57%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    2 CIDPGPLNDTACEEVQPP-PCPVAAKRNWVVETTTQVGALAETINCSDGSFEVEWRGSIIVDTEIVVVDGTFLNITGGGNFSAVLDG 87
            C+DP   +   C E     PC   A+  WVVE + Q  ALA  +NCS GSF+VEWRGS+ +D  I +V GT LN+TGGG  SAV+DG
Sbjct: 2017 CLDPSATDLYDCGETPAATPCSAEAQEAWVVEDSAQAQALAANVNCSGGSFQVEWRGSVSLDAPIFIVHGTDLNVTGGGEASAVIDG 2103          
BLAST of mRNA_H-elongata_contig17997.4785.1 vs. uniprot
Match: A0A6H5KR67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR67_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.320e-17
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    2 CIDPGPLNDTACEEVQPP---PCPVAAKRNWVVETTTQVGALAETINCSDGSFEVEWRGSIIVDTEIVVVDGTFLNITGGGNFSAVLDG 87
            C+DP       CEE  PP   PC + A++ WVVE + Q  A+A  +NCS  SF+V+WRGS+ +D  I ++ GT LN+TGGG  SAV+DG
Sbjct:  114 CLDPSATELYDCEE--PPTGSPCSLEAQQAWVVEDSAQAQAVAANVNCSGESFQVKWRGSVSLDAPIFIMHGTDLNVTGGGEASAVIDG 200          
BLAST of mRNA_H-elongata_contig17997.4785.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.220e-16
Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    2 CIDPGPLNDTACEEVQPP---PCPVAAKRNWVVETTTQVGALAETINCSDGSFEVEWRGSIIVDTEIVVVDGTFLNITGGGNFSAVLDG 87
            C+DP   ++    E  PP   PC    ++ WVV+ + Q  ALA  +NCS GSFEVEWRG+++V++   VVDGT L+ITG G+ SA +DG
Sbjct:  122 CLDPDADDEFYECEAAPPTALPCSAEVQQTWVVDDSAQAQALASAVNCSGGSFEVEWRGTVVVESVFYVVDGTTLSITGDGS-SAAIDG 209          
BLAST of mRNA_H-elongata_contig17997.4785.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 3.010e-16
Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    2 CIDPGPLNDT-ACEEVQPP--PCPVAAKRNWVVETTTQVGALAETINCSDGSFEVEWRGSIIVDTEIVVVDGTFLNITGGGNFSAVLDG 87
            C+DPG  N    C+E  P   PC    +++WVV  + +  ALA  +NCS GSFEVEWRGS++V++ I V DGT + +TG G+ +AV+DG
Sbjct:   17 CLDPGSSNGFYECQEPPPATLPCSAEVQQSWVVADSAEALALAAAVNCSGGSFEVEWRGSVVVESPIYVRDGTIVTVTGVGS-TAVIDG 104          
BLAST of mRNA_H-elongata_contig17997.4785.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 5.010e-15
Identity = 42/89 (47.19%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    2 CIDPG-PLNDTACEE--VQPPPCPVAAKRNWVVETTTQVGALAETINCSDGSFEVEWRGSIIVDTEIVVVDGTFLNITGGGNFSAVLDG 87
            C+DP  P     CE   +   PCP  ++ NWVV  + Q  ALA  +NCS GSFEVEW G+++V+  I V DGT L ITG    +A LDG
Sbjct:  195 CVDPSAPEELYECEAPPITTTPCPADSEWNWVVGDSEQALALALAVNCSGGSFEVEWVGTVVVNETIFVTDGTVLTITGAAGSNAALDG 283          
BLAST of mRNA_H-elongata_contig17997.4785.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 2.260e-11
Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 0
Query:    2 CIDPGPLNDTACEEVQPP-----PCPVAAKRNWVVETTTQVGALAETINCSDGSFEVEWRGSIIVDTEIVVVDGTFLNITGGGN 80
            C+DP   ++    E  PP     PC    ++ WVV+   +  ALA  +NCS GSFEVEW G+++++  IVV  GT L ITG G+
Sbjct:  271 CLDPSAGDEFY--ECSPPSPEALPCSAEVQQTWVVDEQEEAHALAAAVNCSGGSFEVEWSGTVVMEMPIVVGAGTVLTITGAGS 352          
BLAST of mRNA_H-elongata_contig17997.4785.1 vs. uniprot
Match: A0A6H5K1P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P8_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.460e-10
Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    2 CIDPGPLNDTACEEVQPPP----CPVAAKRNWVVETTTQVGALAETINCSDGSFEVEWRGSIIVDTEIVVVDGTFLNITG 77
            C+DP    D   E  QP P    C +  ++ WV++   Q  ALA  +NCS GSF+VEWRG+++++  IV+  GT L I+G
Sbjct:   31 CLDPS-AGDEFYECSQPSPEALPCSLEVQQTWVLDEQEQAHALAAAVNCSGGSFQVEWRGTVVMEIPIVIGAGTVLTISG 109          
BLAST of mRNA_H-elongata_contig17997.4785.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 5.100e-10
Identity = 34/76 (44.74%), Postives = 42/76 (55.26%), Query Frame = 0
Query:    2 CIDPGPLNDTACEEVQPPPCPVAAKRNWVVETTTQVGALAETINCSDGSFEVEWRGSIIVDTEIVVVDGTFLNITG 77
            C+DP   N T C       C     R W+VE T     LA  INC+ G+F+VEWRGS+IV   + V  GT +NITG
Sbjct:  201 CLDPS-FNTTECV-TNTTACSPDLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVIVPQTLWVSQGTTVNITG 274          
BLAST of mRNA_H-elongata_contig17997.4785.1 vs. uniprot
Match: A0A6H5JLP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP6_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 6.940e-10
Identity = 36/88 (40.91%), Postives = 47/88 (53.41%), Query Frame = 0
Query:    2 CIDPGPLNDTACEEVQPPPCPVAAKRNWVVETTTQVGALAETINCSDGSFEVEWRGSIIVDTEIVVVDGTFLNITGGGNFS--AVLDG 87
            C+DP   N T C       C     R W+VE T     LA  INC+ G+F+VEWRGS++V   + +  GT +NITG    +  AV DG
Sbjct:   95 CLDPS-FNTTECV-TNTTACAPDLSREWLVENTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVATTASPAVADG 180          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17997.4785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FHH1_ECTSI4.910e-2052.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHG7_ECTSI1.130e-1850.57LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KR67_9PHAE1.320e-1748.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0E9_9PHAE2.220e-1647.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTL7_ECTSI3.010e-1647.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LSC0_ECTSI5.010e-1547.19Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7FTI5_ECTSI2.260e-1141.67Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5K1P8_9PHAE1.460e-1041.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV90_ECTSI5.100e-1044.74Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JLP6_9PHAE6.940e-1040.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17997contigH-elongata_contig17997:1559..1828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17997.4785.1mRNA_H-elongata_contig17997.4785.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17997 1528..1828 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17997.4785.1 ID=prot_H-elongata_contig17997.4785.1|Name=mRNA_H-elongata_contig17997.4785.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
MCIDPGPLNDTACEEVQPPPCPVAAKRNWVVETTTQVGALAETINCSDGS
FEVEWRGSIIVDTEIVVVDGTFLNITGGGNFSAVLDGENR
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