prot_H-elongata_contig17969.4772.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17969.4772.1
Unique Nameprot_H-elongata_contig17969.4772.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length198
Homology
BLAST of mRNA_H-elongata_contig17969.4772.1 vs. uniprot
Match: D8LRZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ0_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.680e-48
Identity = 86/128 (67.19%), Postives = 107/128 (83.59%), Query Frame = 0
Query:    1 RGQGHLLSNDFRKASKDLQRSVDLCTTMPISWAALGVALFKLGITHEQSFSSSVSECLEIMEDALERFPENSEVLLFFAEILVSMGNYARGLDLLKRSASLDPECPLPYVNAARAYLGMNDLVAARRQ 128
            RGQGHLL+NDFRKA+ DL+RSV+LC TMPIS AA GVALFKL    E    SS+S+C++++E++ E FPEN EVL FFAE+L+SMG++ +GL+ L+ +ASLDPECP+PYVNAARAYLGMND  AARRQ
Sbjct:  713 RGQGHLLANDFRKATADLRRSVELCPTMPISRAAWGVALFKLATAAELPSPSSLSKCVQVLEESRELFPENPEVLFFFAEVLISMGDFKKGLEFLQTAASLDPECPVPYVNAARAYLGMNDTKAARRQ 840          
BLAST of mRNA_H-elongata_contig17969.4772.1 vs. uniprot
Match: A0A835YUV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV6_9STRA)

HSP 1 Score: 134 bits (338), Expect = 5.500e-33
Identity = 83/246 (33.74%), Postives = 123/246 (50.00%), Query Frame = 0
Query:    1 RGQGHLLSNDFRKASKDLQRSVDLCTTMPISWAALGVALFKLGITHEQSFSSS-----------------------------------------VSECLEIMEDALERFPENSEVLLFFAEILVSMGNYARGLDLLKRSASLDPECPLPYVNAARAYLGMNDLVAARRQGHLEHGQALDSTYP----------GTFMDMGQLLMQEGFPAEAMSMYARGVEMARFPSEIHDAMACLDVAKCHLEAQ 195
            RGQ HLL+N+ + AS DLQR+        ++ A+ G++LFK     + S                                             + + L I++DA    P++ EV LF +E+L  +G++A  L LL  +A+ DP CPLPYVNA RA+ GM DL +ARR  HL     + +  P          G ++D GQ+  + G   EAM +Y +GV  +R+ SE+HDA+ACL +A+ HLEA+
Sbjct:  823 RGQYHLLTNNPKAASFDLQRAAGFAEAPAVAQASYGISLFKRAAAPQGSLRRRTEVMRSPPINGALILITVAAARRRDARRRGLQLGMSQEPYRMDQALRILKDASWTHPDSVEVALFHSEVLTHLGDFAGALALLAAAAAKDPSCPLPYVNAGRAFTGMGDLPSARR--HLARAMQVRARAPSQEDVDPLCSGAYLDFGQVETRAGHVQEAMRLYEQGVHCSRYLSELHDALACLTIARTHLEAK 1066          
BLAST of mRNA_H-elongata_contig17969.4772.1 vs. uniprot
Match: A0A7S2WSB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSB2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 8.810e-16
Identity = 59/185 (31.89%), Postives = 88/185 (47.57%), Query Frame = 0
Query:   34 ALGVALFKLGITHEQ--SFSSSVS-----ECLEIMEDALERFPENSEVLLFFAEILVSMGNYARGLDLLKRSASLDPE-------------CPLPYVNAARAYLGMNDLVAARRQGHLEHGQALDSTYPGTFMDMGQLLMQEGFPAEAMSMYARGVEMARFPSEIHDAMACLDVAKCHLEAQELL 198
            +L VA FKL +      +   SVS     +   ++  A+ + P+  E+LL   E++   G++   L+    +A    E             CPLPYVNA RAYL MN+ V A R  HLE  + +D       +D+GQL +Q G    A+  +      +R   E+HDAMAC  VA  H +A + +
Sbjct:  404 SLAVAYFKLDLLSGGGGALGFSVSSRFTFQMQRLLRKAVSKHPDQGELLLLHGELVAQGGDFLGALEKFAAAAQGSDEAEVGHVPTALPRGCPLPYVNAGRAYLQMNEPVLAER--HLERAKEVDPFCAACHLDLGQLWVQRGDVVRALESFKFARSYSRTFPELHDAMACEQVALAHQQALDAI 586          
BLAST of mRNA_H-elongata_contig17969.4772.1 vs. uniprot
Match: A0A6S9M461_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M461_HETAK)

HSP 1 Score: 79.7 bits (195), Expect = 1.080e-14
Identity = 53/161 (32.92%), Postives = 79/161 (49.07%), Query Frame = 0
Query:    1 RGQGHLLSNDFRKASKDLQRSVDLCTTMP--------ISWAALGVALFKLGITHEQSFSSSVSECLEIMEDALERFPENSEVLLFFAEILVSMGNYARGLDLLKRSASLDPECPLPYVNAARAYLGMNDLVAARRQGHLEHGQALDSTYPGTFMDMGQLLM 153
            R Q +L+ N+ R A+ DL+R        P        +  A LG+A FK+ +             L  +E A    P+N EVLLF+ E+L  +G++ + L L +R+A + P CPLP+VNA RAYL +ND  A                    ++D+GQLL+
Sbjct:   79 RAQLYLMKNENRLAANDLRRCEARHEAGPGGEEGVPALVRATLGIACFKMDMGSPLR--------LRQIERAHRLHPDNVEVLLFYGEMLTQVGDFKKALALFRRAAEVSPRCPLPFVNAGRAYLSLNDHAAXXXXXXXXXXXXXXXXX--AYLDLGQLLL 229          
BLAST of mRNA_H-elongata_contig17969.4772.1 vs. uniprot
Match: A0A7S2CEM9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CEM9_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.840e-13
Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0
Query:   98 SASLDPECPLPYVNAARAYLGMNDLVAARRQGHLEHGQALDSTYPGTFMDMGQLLMQEGFPAEAMSMYARGVEMARFPSEIHDAMACLDVAKCHLEAQE 196
            + +L   CPLPYVNA RAYL MN+ V A    HL H   +D +     +D+GQL +Q G   +A+  +   +  +R   E+HDA+AC  VA  H  A +
Sbjct:   31 ATALPAGCPLPYVNAGRAYLQMNEPVLAEL--HLNHALEVDDSCAACHLDLGQLWLQRGDMEKALGHFECALSCSRSFPELHDALACRRVALAHQAAMD 127          
BLAST of mRNA_H-elongata_contig17969.4772.1 vs. uniprot
Match: A0A7S2GV91_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GV91_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.220e-9
Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 0
Query:  100 SLDPECPLPYVNAARAYLGMND---LVAARRQGHLEHGQALDSTYPGTFMDMGQLLMQEGFPAEAMSMYARGVEMARFPSEIHDAMACLDVAKCHLEAQELL 198
            +L   CPLP VNA RAY+ MN+    VA  R   LE    +D T     +D+GQL ++ G  + A+S +   +E +R   E+HD+M C  VA  H  A + L
Sbjct:   20 ALPRSCPLPQVNAGRAYMQMNESEHAVACFRAA-LE----MDPTCAAGLLDLGQLSLKRGETSSALSYFDSAIESSRSFPEMHDSMTCKRVALAHKRALDTL 116          
BLAST of mRNA_H-elongata_contig17969.4772.1 vs. uniprot
Match: A0A4Y2B419_ARAVE (Mitochondrial import receptor subunit TOM70 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2B419_ARAVE)

HSP 1 Score: 62.4 bits (150), Expect = 5.770e-8
Identity = 48/196 (24.49%), Postives = 85/196 (43.37%), Query Frame = 0
Query:    1 RGQGHLLSNDFRKASKDLQRSVDLCTTMPISWAALGVALFKLGITHEQSFSSSVSECLEIMEDALERFPENSEVLLFFAEILVSMGNYARGLDLLKRSASLDPECPLPYVNAARAYLGMNDLVAARRQGHLEHGQALDSTYPGTFMDMGQLLMQEGFPAEAMSMYARGVEMARFPSEIHDAMACLDVAKCHLEAQE 196
            RGQ +LL   F    KD+++S  L    P + A      ++ GI        S +  L+  E+  + FP  SE L  +A++L   G Y +     KR+  LD + P  YV+     L   + V    + +L    ++D      +  +G + +Q+G     + ++ + V+ A   +E+    + L  AK   +A E
Sbjct:  370 RGQVYLLMERFNDCLKDMEKSCSLNPNFPSARAQKCYIQYRCGIQFNDENQKSAA--LKGFEEIEKNFPNCSESLFLYAQVLSECGEYQKAETYFKRAGELDAKDPNVYVHLGILALQWKEDVNLAIE-YLNKAISMDEKCQFGYETLGSIEIQKGNLQRGLELFQKAVDAAHTETELAHLYSLLLAAKAQAKAAE 562          
BLAST of mRNA_H-elongata_contig17969.4772.1 vs. uniprot
Match: A0A7X1P611_9PROT (PEP-CTERM system TPR-repeat protein PrsT n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1P611_9PROT)

HSP 1 Score: 55.1 bits (131), Expect = 1.990e-5
Identity = 49/184 (26.63%), Postives = 80/184 (43.48%), Query Frame = 0
Query:    2 GQGHLLSNDFRKASKDLQRSVDLCTTMPISWAALGVALFKLGITHEQSFSSSVSECLEIMEDALERFPENSEVLLFFAEILVSMGNYARGLDLLKRSASLDPECPLPYVNAARAYLGMNDLVAARRQGHLEHGQALDSTYPGTFMDMGQLLMQEGFPAEAMSMYARGVEMARFPSEIHDAMACL 185
            G+ H+  ND+ +A K  +++  L          LG++    G        ++ +E       AL+    +++VLL    +      YA+ L   +   S  P  P+ Y   A AY+G ND+ AARR   LE   AL   Y    +++ QL +QEG  A A   +   +   R   + + A+A L
Sbjct:  383 GEVHMQLNDYERAKKFFEQAAALDPKNAAMRTGLGLSQLAAG-----DVDAATAELQSA--SALDGDRYHADVLLISTHL--QRRQYAQALKAARALESKQPSNPMTYNLLAAAYIGSNDIPAARRS--LEKSLALQPGYTPAALNLAQLDLQEGNKAAARKRFEDMIARDRSNVQAYIALASL 555          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17969.4772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LRZ0_ECTSI1.680e-4867.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUV6_9STRA5.500e-3333.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WSB2_9STRA8.810e-1631.89Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6S9M461_HETAK1.080e-1432.92Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2CEM9_9STRA3.840e-1339.39Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2GV91_9STRA4.220e-938.24Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4Y2B419_ARAVE5.770e-824.49Mitochondrial import receptor subunit TOM70 n=1 Ta... [more]
A0A7X1P611_9PROT1.990e-526.63PEP-CTERM system TPR-repeat protein PrsT n=1 Tax=B... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..196
e-value: 6.5E-28
score: 99.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..171
NoneNo IPR availablePFAMPF14559TPR_19coord: 58..115
e-value: 4.2E-6
score: 27.2
NoneNo IPR availablePANTHERPTHR46208FAMILY NOT NAMEDcoord: 1..194
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..105
score: 12.899

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17969contigH-elongata_contig17969:5193..6848 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17969.4772.1mRNA_H-elongata_contig17969.4772.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17969 5193..6848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17969.4772.1 ID=prot_H-elongata_contig17969.4772.1|Name=mRNA_H-elongata_contig17969.4772.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
RGQGHLLSNDFRKASKDLQRSVDLCTTMPISWAALGVALFKLGITHEQSF
SSSVSECLEIMEDALERFPENSEVLLFFAEILVSMGNYARGLDLLKRSAS
LDPECPLPYVNAARAYLGMNDLVAARRQGHLEHGQALDSTYPGTFMDMGQ
LLMQEGFPAEAMSMYARGVEMARFPSEIHDAMACLDVAKCHLEAQELL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom