prot_H-elongata_contig17965.4767.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17965.4767.1
Unique Nameprot_H-elongata_contig17965.4767.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length962
Homology
BLAST of mRNA_H-elongata_contig17965.4767.1 vs. uniprot
Match: D8LPV0_ECTSI (Acyl-CoA-binding domain-containing protein 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV0_ECTSI)

HSP 1 Score: 451 bits (1161), Expect = 5.180e-133
Identity = 407/1143 (35.61%), Postives = 534/1143 (46.72%), Query Frame = 0
Query:    1 MGSISQTSLHDTQEFVRGLEMQARRILTKANKRRTEELRRQQIMARKIGS-ANVEAPNKFIVEIPPGVHEWGDQLASRRMEISSTGMIATVRAAAGERAKDRSLNGMD---TTLPSLEGSGSTIGNFAGGGGRNTAVQRTLPQITRRAGRLTFETNPSGVGVISRGTAESGVGGSGGELGRGGKVRATVPPVKIDDRLTASPFFSVSMVDLTKPPKCATPDAGNPLSDTGEVEEHPK---SISNVRAITSSKARMAIFDAGLIDPPLRNNKH-KGP-HFEEQGVTSWSSDDLRVKYRAERQREEAYQAFRLEEQVAEALEQDYGQAVAVPEIGRHPLYVAYYAQLEQENSRCLVRASARNKMKRFILDIHTVWMTNLAHHPEFRRMSAGIVATTRVNPTGGVDND--------------------GSNIK------PVASAKRRGLDGGRDTAAIAASQSQIQSVCPELAFRQAVFYSSSSK----------------SDCREG----GVRGGEYKLEREKHAPFTTASSSAWSYDGTDTERGKLTEPPPHTPKVPTLTLLISEQRRLAARLPVNSSRLSRDGDHREALGIGESKARWSSIEGRDPIGTSVLLSETHTRMLRVRRFKP--------------------AAVVVAHSTTNHCSFLMASDESRERSSQDSC--STAVFARGGLTNTEASEVATWIVTSYLPYDGSEMHMFVRDTAVKKAVGEALSM------SCYRYPAPGPRDVETDVREQNKGE---------DGV-----GGRGVRLLVLRRGERIPVLDRDGRVDRTVLAVLEV-----------------FVVSSCR----------------------------------ALSSGTWTTPTKTTIEERDDDNGSALDV--TLLEIVAYPI-ITLPPPLG---------KRRRPQRTILTAGSLWQRRQ---RLHPDVVTLMDAPPED--LVGWLSCASGCSQDSRMEIEYGEKDSGESVDRGDGISRVVNARGSGSRNGSGMIRSLAGDTPEV--------AIEDIVRMVAFGPQNNLDNDRQDGCQ-----VMPLLLRPSQSAGPE----AMVAPCRIKKDSESSAWRIPVGG--ASRLADESRAEVLLSLVRLGAYG 959
            +GS + T+  DT+EF+RGLEM AR++LT ANK+R +EL+RQQ +AR++G+ A+V+ P KF++E+PP   EWGDQLAS+ MEI+ +GM+  VRA     ++ R L+G +   ++ P+L   G+     +  GGR                                         +G +    G  R  VP  KID RLT SP FSVSM +LTKPP+                         I+N+R + +SK       AG      R  K  KG    E QGVTSWSSDDLRVKYRAER+REEAYQAFRLEEQV+EALE+DYGQ VAVPE+ RHPLYVAYY QLE+EN+RCL+RASARNKMKRFI D+HTVW+TNLAHHPEFRRM  G   +      G VD                      G+ I       P A+  RRGLDGGRD+ AIAASQSQIQSV P+ AFR A FYS +++                S+  EG    G RGG  +L          A+ ++ + DG   E G   E PP     P L +L SE+RRLA    V++                               G+ + +S   TR+LRV RF P                    A              L+A+     R  +        + ++G  +       ATW+++SY PYDGSE  + V D AV K VG+ALS       +     +PG  D  +   +Q +GE          G+     GG G RLLVLR+G R+PVLD  G V R VL+++E+                  +++S R                                  A S G  T P+       D    +A+     LLE++AYP  ++  P +          +R   +R ILTA SLWQRR+    L P      D PP +     WL        D    IE     + +  +R     R         + G G   S  GD   V        A++D+V MVAFGP      ++ D CQ      MPL+L P+QS GPE    A+V P R +     SA  + V G   + LA ESRAE+LLSLVRLG+ G
Sbjct:    5 LGSKTTTAHDDTREFIRGLEMTARKVLTNANKKRMQELQRQQNLARRLGTNADVDPPKKFVIEVPPETEEWGDQLASKTMEIAPSGMVVGVRATR-RPSRHRRLDGSEAAGSSFPALSEGGTNAAEGSDAGGRAGMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAANGAK----GMTRTVVPVAKIDGRLTVSPLFSVSMAELTKPPRXXXXXXXXXXXXXXXXXXXXXXAGGIANMRVVNASKVIGKGRSAGKSPHATRKPKRVKGAAETEGQGVTSWSSDDLRVKYRAEREREEAYQAFRLEEQVSEALEKDYGQVVAVPEVDRHPLYVAYYNQLERENTRCLLRASARNKMKRFITDVHTVWLTNLAHHPEFRRMVRGAAVSQEEGGIGAVDGXXXXXXXXXXXXXXXXXXHSYGNEIDQLEATTPGANPSRRGLDGGRDSVAIAASQSQIQSVQPKRAFRGAFFYSGAAQDSSSWPGQLTSETATSSNQLEGQQSAGTRGGATQL----------AAHNSLTDDGA--EGGDSPELPPAPHASPALAVLASERRRLAT---VSTGGAGSTRXXXXXXXXXXXXXXXXXXXXXXDAGSWLDMS---TRVLRVLRFAPPXXXLPPPGMEFTPGEDGGPADYTDLEPPDKSDGTLVATAREDHRGDKTGLIDQAGLASQGQPSRPPPPPEATWMISSYHPYDGSETRVMVGDVAVAKVVGDALSAHGPLSTAGMSLSSPGAVDAASASSKQKRGEVESGRATIPSGIESAEKGGLG-RLLVLRKGVRVPVLDDHGGVTRKVLSIVELRLRLGSVSSMLLSSHLQSILASLRDTISFCPSPTDRHVPSMLRIRSNTKNKTQVFASSASSEGGKTPPSVADTPIEDGAKVAAMTAGNVLLEVIAYPAGLSAAPEMDGRQEGRESLRREGRRRVILTAESLWQRRRWRRSLRPGAALPWDEPPPEGRPTSWLPRPGKHDDDGSPPIEERRNAARQQAEREGEEERWPVPESI--QGGEGATASEGGDGDAVREKSAHQQALDDLVDMVAFGPHP----EKTDECQGLSSMAMPLVLVPAQSFGPEGQREAVVVPGR-ESAPGCSATSMAVDGLAVALLAQESRAEILLSLVRLGSSG 1116          
BLAST of mRNA_H-elongata_contig17965.4767.1 vs. uniprot
Match: A0A6H5KAT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT0_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 6.300e-87
Identity = 316/920 (34.35%), Postives = 416/920 (45.22%), Query Frame = 0
Query:  235 ISNVRAITSSKARMAIFDAGLIDPPLRNNKH-KGP-HFEEQGVTSWSSDDLRVKYRAERQREEAYQAFRLEEQVAEALEQDYGQAVAVP------------------------EIGRHPLYVAYYAQLEQENSRCLVRASARNKMKRFILDIHTVWMTNLAHHPEFRRMSAGIVATTRVNPTGGVDND--------------------GSNIK------PVASAKRRGLDGGRDTAAIAASQSQIQSVCPELAFRQAVFYSSSSKSDCREGGVRGGEY-----KLEREKHAPFTTASSSAWSYDGTDTERGKLTEPP--PHTPKV-PTLTLLISEQRRLAARLPVNSSRLSRDGDHREALGIGESKARWSSIEGRDPIGTSVLLSETHTRMLRVRRFKPAAVVV-----------AHSTTNHCSF---------LMASDESRERSSQDSCSTAVFARGGLTNTEASEV-------ATWIVTSYLPYDGSEMHMFVRDTAVKKAVGEALSM------SCYRYPAPGPRDVETDVREQNKGE---------DGV-----GGRGVRLLVLRRGERIPVLDRDGRVDRTVLAVLEV-----------FV----------------------------------VSSCRALSSGTWTTPTKTTIEERDDDNGSALDV--TLLEIVAYP--IITLPPPLGKRRRPQ--------RTILTAGSLWQRRQ---RLHPDVVTLMDAPPED--LVGWLSCASGCSQDSRMEIEYGEKDSGESVDRGDGISR-------VVNARGSGSRNGSGMIRSLAGDTPEV---------AIEDIVRMVAFGPQNNLDNDRQDGCQ-----VMPLLLRPSQSAGPEA----MVAPCRIKKDSESSAWRIPVGGA-SRLADESRAEVLLSLVRLGAYG 959
            I+N+R +  SK       AG         K  KG    E QGVTSWSSDDLRVKYRAER+REEAYQAFRLEEQVAEALE+DYGQ +                           E+ RHPLYVAYY QLE+EN+RCL+RASARNKMKRFI D+HTVW+TNLAHHPEF RM  G   +      G VD                      G+ I       P A+  RRGLDG RD+ AIAASQSQIQSV P+ AFR A FYS +++      G    E      +LE E  A     ++   +++    +  +  EPP  P  P V P L +L SE+RRLAA   V++      G  R ++                         +  TR+LRV RF P                A  + ++            L+A+++  +R      +T +  + G  + +           ATW+++SY PYDGSE  + V D AV K VG+ALS       +     +PG  D  +   +Q +GE          G+     GG G RLLVLRRG R+PVLD  G V R VL+++EV           FV                                  V +  A S G  T P+ T     D    +A+     LLE++AYP  + T P   G++   +        R ILTA SLWQRR+    L P V    D PP +     WL       +D    IE   K + +  + G+G          V    G+ +  G G          +          A++D+V MVAFGP +    ++ D CQ      MPL+L P+QS GPE     +V P R    +  +      G A + LA+ES+AE+LLSLVRLG+ G
Sbjct:   35 IANMRVVNPSKVIGKGRSAGKSPHATSKPKRVKGAAETEGQGVTSWSSDDLRVKYRAEREREEAYQAFRLEEQVAEALEKDYGQGIQEKDSRTSLELTLYQKKLSSPPHNVDVEVDRHPLYVAYYNQLERENTRCLLRASARNKMKRFITDVHTVWLTNLAHHPEFHRMVRGATVSQEEGGVGAVDGXXXXXXXXXXXXXXXXXXDSCGNEIDQLQATTPGATPSRRGLDGRRDSVAIAASQSQIQSVQPKRAFRGAFFYSGAAQDSSSSPGQLSSETATSSNRLEGEGSAGTRGGATQLAAHNSLTDDGAEGGEPPELPPAPHVSPALAVLASERRRLAA---VSTGD---PGSTRRSVXXXXXXXXXXXXXXXXXXNAGSWF-DMSTRVLRVLRFAPPXXXXXXPGMAITPGEAGGSADYADLEPPHKSDETLVATEQEDDRGD----ATGLIDQPGPASQKRPSPXXXXXXEATWMISSYHPYDGSETRVMVGDVAVAKVVGDALSAHDPLSTAGMSLSSPGAADAASASSKQTRGEVESGRATVPSGIESAEKGGLG-RLLVLRRGVRVPVLDERGGVTRKVLSIVEVSSSSLAAVVALFVPVVVSVAATVLLSLLPLHVPSMLGIRSNTQNKTQVFASSASSEGGKTPPSVTDTPVEDAAKVAAMTAGNVLLEVIAYPTGLSTAPEMDGRQEGRESLRHEGRRRVILTAESLWQRRRWRRSLRPGVALPWDEPPPEGGPTSWLPRPGKRDEDGSPPIEERRKFARQQAE-GEGEEERWPVPESVQGGEGATASEGGGRXXXXXXXXXDAVGKKSAHQQALDDLVDMVAFGPPS----EKTDECQGLSSMAMPLILVPAQSFGPEGQRETVVLPGREAAPACFATSTAMDGLAVALLAEESKAEILLSLVRLGSSG 937          
BLAST of mRNA_H-elongata_contig17965.4767.1 vs. uniprot
Match: A0A1V9ZHP7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZHP7_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 6.200e-15
Identity = 55/145 (37.93%), Postives = 83/145 (57.24%), Query Frame = 0
Query:  243 SSKARMAIFDAGLIDPPLR----NNKHKGPH--FEEQGVTSWSSDDLRVKYRAERQREEAYQAFRLEEQVAEALEQDYGQAVAVPEIGRHPLYVAYYAQLEQENSRCLVRASARNKMKRFILDIHTVWMTNLAHHPEFRRMSAGI 381
            S++ RM   +A   DP  R    ++ H  P    E QG TSW+ DDL VKYR E++RE A+ A    ++ +E+L         +P + RHPLYV Y+  L+ +N      + A+NK K+F+L++HTVW+TNL H  E   +++ I
Sbjct:  164 STERRMC--NACWADPMKRTKCEHSLHSNPRDMIELQGATSWAIDDLYVKYRGEKEREAAWNASCALQEASESL--------VIPILERHPLYVKYFYTLDHDNQYVQTLSRAKNKTKQFLLNVHTVWLTNLDHFNEVYHLNSNI 298          
BLAST of mRNA_H-elongata_contig17965.4767.1 vs. uniprot
Match: A0A485L9M9_9STRA (Aste57867_18277 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9M9_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.460e-12
Identity = 65/184 (35.33%), Postives = 90/184 (48.91%), Query Frame = 0
Query:  267 GP-HFEEQGVTSWSSDDLRVKYRAERQREEAYQAFRLEEQVAEALEQDYGQAVAVPEIGRHPLYVAYYAQLEQENSRCLVRASARNKMKRFILDIHTVWMTNLAHHPEFRRMSAGIVATTRVNPTGGVDNDGSNIKPVASAKRRGLDGGRDTAAIAASQSQIQSVCPELAFRQAVFYSSSSKSD 449
            GP   E QG TSWSSDD+  KYRAER+RE A+        VA    Q     V VP + RHPLY  Y+  +E +N+     + A+N+ K+F+LD++ VW+TNL H   F  M                   G ++ P      +GL G  D  AI    SQIQSV    A +  +  S+++  +
Sbjct:  219 GPGEMELQGATSWSSDDIHFKYRAEREREAAW--------VASTTLQATDSPV-VPILERHPLYDKYFHTVETDNTYVQNLSRAKNQTKQFVLDVNRVWLTNLDH---FNTML------------------GHDVSP----STKGLRGRHDLGAIRQGYSQIQSVSMACALKNTILPSATNDGE 368          
BLAST of mRNA_H-elongata_contig17965.4767.1 vs. uniprot
Match: A0A8J2SJV8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJV8_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 3.660e-6
Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 0
Query:  264 KHKGPHFEEQGVTSWSSDDLRVKYRAERQREEAYQ-AFRLEEQVAEALEQDYGQAVAVPEIGRHPLYVAYYAQLEQENSRCLVRASARNKMKRFILDIHTVWMTNLAH 370
            K K  + E+ G T WS +DL  KYR +  R+ A+  + +++E  +E ++++    ++V  + RHPL        E  N  C+ R  AR   +RF+L++H +W+TNL H
Sbjct:  181 KGKNANIEKTGPTIWSVEDLNSKYRNKLLRKSAHHVSLKVQELQSELVKEE--SLISVVGLTRHPLLALCDQHTETANLLCIGRGRARCVARRFVLEVHQIWLTNLDH 286          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17965.4767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LPV0_ECTSI5.180e-13335.61Acyl-CoA-binding domain-containing protein 6 n=1 T... [more]
A0A6H5KAT0_9PHAE6.300e-8734.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1V9ZHP7_9STRA6.200e-1537.93Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A485L9M9_9STRA1.460e-1235.33Aste57867_18277 protein n=1 Tax=Aphanomyces stella... [more]
A0A8J2SJV8_9STRA3.660e-633.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17965contigH-elongata_contig17965:117..6396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17965.4767.1mRNA_H-elongata_contig17965.4767.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17965 117..6402 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17965.4767.1 ID=prot_H-elongata_contig17965.4767.1|Name=mRNA_H-elongata_contig17965.4767.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=962bp
MGSISQTSLHDTQEFVRGLEMQARRILTKANKRRTEELRRQQIMARKIGS
ANVEAPNKFIVEIPPGVHEWGDQLASRRMEISSTGMIATVRAAAGERAKD
RSLNGMDTTLPSLEGSGSTIGNFAGGGGRNTAVQRTLPQITRRAGRLTFE
TNPSGVGVISRGTAESGVGGSGGELGRGGKVRATVPPVKIDDRLTASPFF
SVSMVDLTKPPKCATPDAGNPLSDTGEVEEHPKSISNVRAITSSKARMAI
FDAGLIDPPLRNNKHKGPHFEEQGVTSWSSDDLRVKYRAERQREEAYQAF
RLEEQVAEALEQDYGQAVAVPEIGRHPLYVAYYAQLEQENSRCLVRASAR
NKMKRFILDIHTVWMTNLAHHPEFRRMSAGIVATTRVNPTGGVDNDGSNI
KPVASAKRRGLDGGRDTAAIAASQSQIQSVCPELAFRQAVFYSSSSKSDC
REGGVRGGEYKLEREKHAPFTTASSSAWSYDGTDTERGKLTEPPPHTPKV
PTLTLLISEQRRLAARLPVNSSRLSRDGDHREALGIGESKARWSSIEGRD
PIGTSVLLSETHTRMLRVRRFKPAAVVVAHSTTNHCSFLMASDESRERSS
QDSCSTAVFARGGLTNTEASEVATWIVTSYLPYDGSEMHMFVRDTAVKKA
VGEALSMSCYRYPAPGPRDVETDVREQNKGEDGVGGRGVRLLVLRRGERI
PVLDRDGRVDRTVLAVLEVFVVSSCRALSSGTWTTPTKTTIEERDDDNGS
ALDVTLLEIVAYPIITLPPPLGKRRRPQRTILTAGSLWQRRQRLHPDVVT
LMDAPPEDLVGWLSCASGCSQDSRMEIEYGEKDSGESVDRGDGISRVVNA
RGSGSRNGSGMIRSLAGDTPEVAIEDIVRMVAFGPQNNLDNDRQDGCQVM
PLLLRPSQSAGPEAMVAPCRIKKDSESSAWRIPVGGASRLADESRAEVLL
SLVRLGAYGEG*
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